data_7X8S
#
_model_server_result.job_id            qtT5IN6LUy9daZGYh1Jc7A 
_model_server_result.datetime_utc      '2024-11-21 22:38:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7x8s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    7X8S 
#
_exptl.entry_id    7X8S 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              1017.086 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2,4-bis(3-methoxy-4-thiophen-2-ylcarbonyloxy-phenyl)-1,3-bis[[4-(2-methylpropanoylamino)phenyl]carbonylamino]cyclobutane-1,3-dicarboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 24 N CYS 22 1_555 D SG CYS 98 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 D SG CYS 101 N CYS 99 1_555 D SG CYS 109 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 E SG CYS 203 R CYS 226 1_555 E SG CYS 273 R CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
#
_chem_comp.formula           'C52 H48 N4 O14 S2' 
_chem_comp.formula_weight    1017.086 
_chem_comp.id                WB2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2,4-bis(3-methoxy-4-thiophen-2-ylcarbonyloxy-phenyl)-1,3-bis[[4-(2-methylpropanoylamino)phenyl]carbonylamino]cyclobutane-1,3-dicarboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O40 C38 WB2 doub 374 n n 
O19 C17 WB2 doub 375 n n 
C28 C27 WB2 doub 376 n y 
C28 C21 WB2 sing 377 n y 
O43 C42 WB2 doub 378 n n 
C38 O39 WB2 sing 379 n n 
C38 C37 WB2 sing 380 n n 
C27 C26 WB2 sing 381 n y 
O14 C13 WB2 doub 382 n n 
C17 O18 WB2 sing 383 n n 
C17 C16 WB2 sing 384 n n 
C20 C21 WB2 sing 385 n n 
C20 C37 WB2 sing 386 n n 
C20 C16 WB2 sing 387 n n 
C21 C22 WB2 doub 388 n y 
C42 C44 WB2 sing 389 n n 
C42 N41 WB2 sing 390 n n 
C37 N41 WB2 sing 391 n n 
C37 C56 WB2 sing 392 n n 
C45 C44 WB2 doub 393 n y 
C45 C46 WB2 sing 394 n y 
C26 O29 WB2 sing 395 n n 
C26 C23 WB2 doub 396 n y 
C16 N15 WB2 sing 397 n n 
C16 C56 WB2 sing 398 n n 
C13 N15 WB2 sing 399 n n 
C13 C12 WB2 sing 400 n n 
C44 C49 WB2 sing 401 n y 
O29 C30 WB2 sing 402 n n 
O52 C51 WB2 doub 403 n n 
C46 C47 WB2 doub 404 n y 
C09 C12 WB2 doub 405 n y 
C09 C08 WB2 sing 406 n y 
C33 C34 WB2 sing 407 n y 
C33 C32 WB2 doub 408 n y 
C22 C23 WB2 sing 409 n y 
C56 C57 WB2 sing 410 n n 
C54 C53 WB2 sing 411 n n 
C23 O24 WB2 sing 412 n n 
C12 C11 WB2 sing 413 n y 
C30 C32 WB2 sing 414 n n 
C30 O31 WB2 doub 415 n n 
C49 C48 WB2 doub 416 n y 
C51 C53 WB2 sing 417 n n 
C51 N50 WB2 sing 418 n n 
C08 C07 WB2 doub 419 n y 
C34 C35 WB2 doub 420 n y 
C47 C48 WB2 sing 421 n y 
C47 N50 WB2 sing 422 n n 
C32 S36 WB2 sing 423 n y 
C53 C55 WB2 sing 424 n n 
O24 C25 WB2 sing 425 n n 
C57 C64 WB2 doub 426 n y 
C57 C58 WB2 sing 427 n y 
C11 C10 WB2 doub 428 n y 
C35 S36 WB2 sing 429 n y 
C07 C10 WB2 sing 430 n y 
C07 N06 WB2 sing 431 n n 
C01 C02 WB2 sing 432 n n 
C64 C63 WB2 sing 433 n y 
C58 C59 WB2 doub 434 n y 
N06 C04 WB2 sing 435 n n 
C02 C04 WB2 sing 436 n n 
C02 C03 WB2 sing 437 n n 
C04 O05 WB2 doub 438 n n 
C63 C62 WB2 doub 439 n y 
C59 C62 WB2 sing 440 n y 
C59 O60 WB2 sing 441 n n 
C61 O60 WB2 sing 442 n n 
C62 O65 WB2 sing 443 n n 
O67 C66 WB2 doub 444 n n 
O65 C66 WB2 sing 445 n n 
C66 C68 WB2 sing 446 n n 
C68 S72 WB2 sing 447 n y 
C68 C69 WB2 doub 448 n y 
S72 C71 WB2 sing 449 n y 
C69 C70 WB2 sing 450 n y 
C71 C70 WB2 doub 451 n y 
C01 H1 WB2 sing 452 n n 
C01 H2 WB2 sing 453 n n 
C01 H3 WB2 sing 454 n n 
C02 H4 WB2 sing 455 n n 
C03 H5 WB2 sing 456 n n 
C03 H6 WB2 sing 457 n n 
C03 H7 WB2 sing 458 n n 
C08 H8 WB2 sing 459 n n 
C09 H9 WB2 sing 460 n n 
C10 H10 WB2 sing 461 n n 
C11 H11 WB2 sing 462 n n 
C20 H12 WB2 sing 463 n n 
C22 H13 WB2 sing 464 n n 
C25 H14 WB2 sing 465 n n 
C25 H15 WB2 sing 466 n n 
C25 H16 WB2 sing 467 n n 
C27 H17 WB2 sing 468 n n 
C28 H18 WB2 sing 469 n n 
C33 H19 WB2 sing 470 n n 
C34 H20 WB2 sing 471 n n 
C35 H21 WB2 sing 472 n n 
C45 H22 WB2 sing 473 n n 
C46 H23 WB2 sing 474 n n 
C48 H24 WB2 sing 475 n n 
C49 H25 WB2 sing 476 n n 
C53 H26 WB2 sing 477 n n 
C54 H27 WB2 sing 478 n n 
C54 H28 WB2 sing 479 n n 
C54 H29 WB2 sing 480 n n 
C55 H30 WB2 sing 481 n n 
C55 H31 WB2 sing 482 n n 
C55 H32 WB2 sing 483 n n 
C56 H33 WB2 sing 484 n n 
C58 H34 WB2 sing 485 n n 
C61 H35 WB2 sing 486 n n 
C61 H36 WB2 sing 487 n n 
C61 H37 WB2 sing 488 n n 
C63 H38 WB2 sing 489 n n 
C64 H39 WB2 sing 490 n n 
C69 H40 WB2 sing 491 n n 
C70 H41 WB2 sing 492 n n 
C71 H42 WB2 sing 493 n n 
N06 H43 WB2 sing 494 n n 
N15 H44 WB2 sing 495 n n 
N41 H45 WB2 sing 496 n n 
N50 H46 WB2 sing 497 n n 
O18 H47 WB2 sing 498 n n 
O39 H48 WB2 sing 499 n n 
#
_atom_sites.entry_id                     7X8S 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           WB2 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      501 
_pdbx_nonpoly_scheme.auth_seq_num     1 
_pdbx_nonpoly_scheme.pdb_mon_id       WB2 
_pdbx_nonpoly_scheme.auth_mon_id      WB2 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 WB2 . . . F 6 121.865 120.458 97.759 1 105.58 ? C01 WB2 501 R 1 
HETATM 2 C C02 WB2 . . . F 6 122.19 121.545 98.811 1 105.58 ? C02 WB2 501 R 1 
HETATM 3 C C03 WB2 . . . F 6 122.515 120.88 100.161 1 105.58 ? C03 WB2 501 R 1 
HETATM 4 C C04 WB2 . . . F 6 121.085 122.634 98.936 1 105.58 ? C04 WB2 501 R 1 
HETATM 5 C C07 WB2 . . . F 6 122.442 124.275 97.572 1 105.58 ? C07 WB2 501 R 1 
HETATM 6 C C08 WB2 . . . F 6 122.47 124.161 96.168 1 105.58 ? C08 WB2 501 R 1 
HETATM 7 C C09 WB2 . . . F 6 123.614 124.475 95.416 1 105.58 ? C09 WB2 501 R 1 
HETATM 8 C C10 WB2 . . . F 6 123.642 124.717 98.166 1 105.58 ? C10 WB2 501 R 1 
HETATM 9 C C11 WB2 . . . F 6 124.786 125.028 97.399 1 105.58 ? C11 WB2 501 R 1 
HETATM 10 C C12 WB2 . . . F 6 124.821 124.923 96.008 1 105.58 ? C12 WB2 501 R 1 
HETATM 11 C C13 WB2 . . . F 6 126.067 125.257 95.131 1 105.58 ? C13 WB2 501 R 1 
HETATM 12 C C16 WB2 . . . F 6 128.574 125.718 94.943 1 105.58 ? C16 WB2 501 R 1 
HETATM 13 C C17 WB2 . . . F 6 128.883 124.392 94.026 1 105.58 ? C17 WB2 501 R 1 
HETATM 14 C C20 WB2 . . . F 6 128.554 127.068 94.072 1 105.58 ? C20 WB2 501 R 1 
HETATM 15 C C21 WB2 . . . F 6 127.431 128.113 94.357 1 105.58 ? C21 WB2 501 R 1 
HETATM 16 C C22 WB2 . . . F 6 127.127 128.62 95.645 1 105.58 ? C22 WB2 501 R 1 
HETATM 17 C C23 WB2 . . . F 6 126.131 129.572 95.926 1 105.58 ? C23 WB2 501 R 1 
HETATM 18 C C25 WB2 . . . F 6 126.564 131.212 97.579 1 105.58 ? C25 WB2 501 R 1 
HETATM 19 C C26 WB2 . . . F 6 125.328 130.105 94.906 1 105.58 ? C26 WB2 501 R 1 
HETATM 20 C C27 WB2 . . . F 6 125.598 129.627 93.592 1 105.58 ? C27 WB2 501 R 1 
HETATM 21 C C28 WB2 . . . F 6 126.613 128.669 93.339 1 105.58 ? C28 WB2 501 R 1 
HETATM 22 C C30 WB2 . . . F 6 123.201 130.797 96.04 1 105.58 ? C30 WB2 501 R 1 
HETATM 23 C C32 WB2 . . . F 6 122.064 131.789 96.375 1 105.58 ? C32 WB2 501 R 1 
HETATM 24 C C33 WB2 . . . F 6 121.398 132.668 95.545 1 105.58 ? C33 WB2 501 R 1 
HETATM 25 C C34 WB2 . . . F 6 120.362 133.478 96.174 1 105.58 ? C34 WB2 501 R 1 
HETATM 26 C C35 WB2 . . . F 6 120.214 133.233 97.501 1 105.58 ? C35 WB2 501 R 1 
HETATM 27 C C37 WB2 . . . F 6 130.038 127.417 94.637 1 105.58 ? C37 WB2 501 R 1 
HETATM 28 C C38 WB2 . . . F 6 131.241 127.054 93.568 1 105.58 ? C38 WB2 501 R 1 
HETATM 29 C C42 WB2 . . . F 6 129.916 129.977 94.531 1 105.58 ? C42 WB2 501 R 1 
HETATM 30 C C44 WB2 . . . F 6 129.959 131.362 95.155 1 105.58 ? C44 WB2 501 R 1 
HETATM 31 C C45 WB2 . . . F 6 129.031 132.33 94.708 1 105.58 ? C45 WB2 501 R 1 
HETATM 32 C C46 WB2 . . . F 6 129.018 133.621 95.249 1 105.58 ? C46 WB2 501 R 1 
HETATM 33 C C47 WB2 . . . F 6 129.914 134.024 96.256 1 105.58 ? C47 WB2 501 R 1 
HETATM 34 C C48 WB2 . . . F 6 130.828 133.042 96.694 1 105.58 ? C48 WB2 501 R 1 
HETATM 35 C C49 WB2 . . . F 6 130.838 131.746 96.149 1 105.58 ? C49 WB2 501 R 1 
HETATM 36 C C51 WB2 . . . F 6 130.554 136.5 96.166 1 105.58 ? C51 WB2 501 R 1 
HETATM 37 C C53 WB2 . . . F 6 130.446 137.969 96.724 1 105.58 ? C53 WB2 501 R 1 
HETATM 38 C C54 WB2 . . . F 6 129.813 138.991 95.748 1 105.58 ? C54 WB2 501 R 1 
HETATM 39 C C55 WB2 . . . F 6 131.849 138.467 97.132 1 105.58 ? C55 WB2 501 R 1 
HETATM 40 C C56 WB2 . . . F 6 129.833 126.267 95.734 1 105.58 ? C56 WB2 501 R 1 
HETATM 41 C C57 WB2 . . . F 6 129.701 126.779 97.222 1 105.58 ? C57 WB2 501 R 1 
HETATM 42 C C58 WB2 . . . F 6 128.53 126.72 98.028 1 105.58 ? C58 WB2 501 R 1 
HETATM 43 C C59 WB2 . . . F 6 128.428 127.177 99.364 1 105.58 ? C59 WB2 501 R 1 
HETATM 44 C C61 WB2 . . . F 6 126.087 127.702 99.513 1 105.58 ? C61 WB2 501 R 1 
HETATM 45 C C62 WB2 . . . F 6 129.555 127.734 99.987 1 105.58 ? C62 WB2 501 R 1 
HETATM 46 C C63 WB2 . . . F 6 130.749 127.809 99.222 1 105.58 ? C63 WB2 501 R 1 
HETATM 47 C C64 WB2 . . . F 6 130.816 127.342 97.888 1 105.58 ? C64 WB2 501 R 1 
HETATM 48 C C66 WB2 . . . F 6 128.883 129.424 101.652 1 105.58 ? C66 WB2 501 R 1 
HETATM 49 C C68 WB2 . . . F 6 128.452 129.865 103.078 1 105.58 ? C68 WB2 501 R 1 
HETATM 50 C C69 WB2 . . . F 6 129.22 129.914 104.22 1 105.58 ? C69 WB2 501 R 1 
HETATM 51 C C70 WB2 . . . F 6 128.568 130.371 105.438 1 105.58 ? C70 WB2 501 R 1 
HETATM 52 C C71 WB2 . . . F 6 127.27 130.683 105.244 1 105.58 ? C71 WB2 501 R 1 
HETATM 53 N N06 WB2 . . . F 6 121.247 123.936 98.325 1 105.58 ? N06 WB2 501 R 1 
HETATM 54 N N15 WB2 . . . F 6 127.333 125.411 95.693 1 105.58 ? N15 WB2 501 R 1 
HETATM 55 N N41 WB2 . . . F 6 130.104 128.764 95.217 1 105.58 ? N41 WB2 501 R 1 
HETATM 56 N N50 WB2 . . . F 6 129.818 135.39 96.76 1 105.58 ? N50 WB2 501 R 1 
HETATM 57 O O05 WB2 . . . F 6 120.071 122.385 99.554 1 105.58 ? O05 WB2 501 R 1 
HETATM 58 O O14 WB2 . . . F 6 125.903 125.371 93.931 1 105.58 ? O14 WB2 501 R 1 
HETATM 59 O O18 WB2 . . . F 6 129.594 123.529 94.563 1 105.58 ? O18 WB2 501 R 1 
HETATM 60 O O19 WB2 . . . F 6 128.389 124.359 92.886 1 105.58 ? O19 WB2 501 R 1 
HETATM 61 O O24 WB2 . . . F 6 125.9 130.016 97.216 1 105.58 ? O24 WB2 501 R 1 
HETATM 62 O O29 WB2 . . . F 6 124.336 131.059 95.21 1 105.58 ? O29 WB2 501 R 1 
HETATM 63 O O31 WB2 . . . F 6 123.182 129.68 96.496 1 105.58 ? O31 WB2 501 R 1 
HETATM 64 O O39 WB2 . . . F 6 132.412 127.176 93.991 1 105.58 ? O39 WB2 501 R 1 
HETATM 65 O O40 WB2 . . . F 6 130.957 126.683 92.433 1 105.58 ? O40 WB2 501 R 1 
HETATM 66 O O43 WB2 . . . F 6 129.677 130.015 93.367 1 105.58 ? O43 WB2 501 R 1 
HETATM 67 O O52 WB2 . . . F 6 131.275 136.308 95.222 1 105.58 ? O52 WB2 501 R 1 
HETATM 68 O O60 WB2 . . . F 6 127.233 127.08 100.07 1 105.58 ? O60 WB2 501 R 1 
HETATM 69 O O65 WB2 . . . F 6 129.472 128.199 101.325 1 105.58 ? O65 WB2 501 R 1 
HETATM 70 O O67 WB2 . . . F 6 128.707 130.181 100.728 1 105.58 ? O67 WB2 501 R 1 
HETATM 71 S S36 WB2 . . . F 6 121.333 132.03 97.959 1 105.58 ? S36 WB2 501 R 1 
HETATM 72 S S72 WB2 . . . F 6 126.853 130.419 103.579 1 105.58 ? S72 WB2 501 R 1 
#
_model_server_stats.io_time_ms              41 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           248 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           72 
#