data_7XA7 # _model_server_result.job_id 23BE-lfGYlprEph4dIyl1A _model_server_result.datetime_utc '2024-11-21 10:25:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xa7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":601}' # _entry.id 7XA7 # _exptl.entry_id 7XA7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XA7 _cell.length_a 63.943 _cell.length_b 130.849 _cell.length_c 564.829 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XA7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression G,H,O,P,W 1 1 A,B,I,J,Q,R 2 1 C,D,K,L,S,T 3 1 E,F,M,N,U,V 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 K N N ? 3 M N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 116 A CYS 116 1_555 A SG CYS 124 A CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 327 A CYS 327 1_555 A SG CYS 344 A CYS 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 513 A CYS 513 1_555 A SG CYS 525 A CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 B SG CYS 18 B CYS 336 1_555 B SG CYS 43 B CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 B SG CYS 61 B CYS 379 1_555 B SG CYS 114 B CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 B SG CYS 73 B CYS 391 1_555 B SG CYS 207 B CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 B SG CYS 162 B CYS 480 1_555 B SG CYS 170 B CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 C SG CYS 116 C CYS 116 1_555 C SG CYS 124 C CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf9 C SG CYS 327 C CYS 327 1_555 C SG CYS 344 C CYS 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf10 C SG CYS 513 C CYS 513 1_555 C SG CYS 525 C CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf11 D SG CYS 18 D CYS 336 1_555 D SG CYS 43 D CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 D SG CYS 61 D CYS 379 1_555 D SG CYS 114 D CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf13 D SG CYS 73 D CYS 391 1_555 D SG CYS 207 D CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf14 D SG CYS 162 D CYS 480 1_555 D SG CYS 170 D CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf15 E SG CYS 116 E CYS 116 1_555 E SG CYS 124 E CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf16 E SG CYS 327 E CYS 327 1_555 E SG CYS 344 E CYS 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf17 E SG CYS 513 E CYS 513 1_555 E SG CYS 525 E CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf18 F SG CYS 18 F CYS 336 1_555 F SG CYS 43 F CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf19 F SG CYS 61 F CYS 379 1_555 F SG CYS 114 F CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf20 F SG CYS 73 F CYS 391 1_555 F SG CYS 207 F CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf21 F SG CYS 162 F CYS 480 1_555 F SG CYS 170 F CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf22 G SG CYS 116 G CYS 116 1_555 G SG CYS 124 G CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf23 G SG CYS 327 G CYS 327 1_555 G SG CYS 344 G CYS 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf24 G SG CYS 513 G CYS 513 1_555 G SG CYS 525 G CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf25 H SG CYS 18 H CYS 336 1_555 H SG CYS 43 H CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf26 H SG CYS 61 H CYS 379 1_555 H SG CYS 114 H CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf27 H SG CYS 73 H CYS 391 1_555 H SG CYS 207 H CYS 525 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf28 H SG CYS 162 H CYS 480 1_555 H SG CYS 170 H CYS 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 B ND2 ASN 25 B ASN 343 1_555 J C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale2 D ND2 ASN 25 D ASN 343 1_555 L C1 NAG . D NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 F ND2 ASN 25 F ASN 343 1_555 N C1 NAG . F NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale4 H ND2 ASN 25 H ASN 343 1_555 P C1 NAG . H NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? metalc ? metalc1 A NE2 HIS 357 A HIS 357 1_555 I ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 A NE2 HIS 361 A HIS 361 1_555 I ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 A OE1 GLU 385 A GLU 385 1_555 I ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc4 A OE2 GLU 385 A GLU 385 1_555 I ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc5 C NE2 HIS 357 C HIS 357 1_555 K ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc6 C NE2 HIS 361 C HIS 361 1_555 K ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc7 C OE1 GLU 385 C GLU 385 1_555 K ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc8 C OE2 GLU 385 C GLU 385 1_555 K ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc9 K ZN ZN . C ZN 601 1_555 S O HOH . C HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc10 E NE2 HIS 357 E HIS 357 1_555 M ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc11 E NE2 HIS 361 E HIS 361 1_555 M ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc12 E OE2 GLU 385 E GLU 385 1_555 M ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc13 G NE2 HIS 357 G HIS 357 1_555 O ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc14 G NE2 HIS 361 G HIS 361 1_555 O ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc15 G OE1 GLU 385 G GLU 385 1_555 O ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc16 G OE2 GLU 385 G GLU 385 1_555 O ZN ZN . G ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XA7 _atom_sites.fract_transf_matrix[1][1] 0.015639 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007642 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ZN A 1 601 1 ZN ZN . J 4 NAG B 1 601 601 NAG NAG . K 3 ZN C 1 601 2 ZN ZN . L 4 NAG D 1 601 601 NAG NAG . M 3 ZN E 1 601 3 ZN ZN . N 4 NAG F 1 601 601 NAG NAG . O 3 ZN G 1 601 4 ZN ZN . P 4 NAG H 1 601 601 NAG NAG . Q 5 HOH A 1 701 10 HOH HOH . Q 5 HOH A 2 702 11 HOH HOH . Q 5 HOH A 3 703 17 HOH HOH . Q 5 HOH A 4 704 3 HOH HOH . Q 5 HOH A 5 705 31 HOH HOH . Q 5 HOH A 6 706 27 HOH HOH . Q 5 HOH A 7 707 26 HOH HOH . Q 5 HOH A 8 708 5 HOH HOH . Q 5 HOH A 9 709 43 HOH HOH . R 5 HOH B 1 701 19 HOH HOH . R 5 HOH B 2 702 40 HOH HOH . R 5 HOH B 3 703 29 HOH HOH . S 5 HOH C 1 701 6 HOH HOH . S 5 HOH C 2 702 12 HOH HOH . S 5 HOH C 3 703 13 HOH HOH . S 5 HOH C 4 704 39 HOH HOH . S 5 HOH C 5 705 15 HOH HOH . S 5 HOH C 6 706 18 HOH HOH . S 5 HOH C 7 707 34 HOH HOH . S 5 HOH C 8 708 25 HOH HOH . S 5 HOH C 9 709 9 HOH HOH . S 5 HOH C 10 710 14 HOH HOH . S 5 HOH C 11 711 21 HOH HOH . T 5 HOH D 1 701 23 HOH HOH . U 5 HOH E 1 701 32 HOH HOH . U 5 HOH E 2 702 30 HOH HOH . U 5 HOH E 3 703 38 HOH HOH . U 5 HOH E 4 704 42 HOH HOH . U 5 HOH E 5 705 4 HOH HOH . U 5 HOH E 6 706 44 HOH HOH . U 5 HOH E 7 707 8 HOH HOH . U 5 HOH E 8 708 37 HOH HOH . U 5 HOH E 9 709 41 HOH HOH . V 5 HOH F 1 701 36 HOH HOH . V 5 HOH F 2 702 22 HOH HOH . V 5 HOH F 3 703 24 HOH HOH . V 5 HOH F 4 704 33 HOH HOH . V 5 HOH F 5 705 20 HOH HOH . W 5 HOH G 1 701 1 HOH HOH . W 5 HOH G 2 702 35 HOH HOH . W 5 HOH G 3 703 2 HOH HOH . W 5 HOH G 4 704 7 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 3 _atom_site.Cartn_x -17.838 _atom_site.Cartn_y 74.119 _atom_site.Cartn_z 95.166 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 69.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #