data_7XA9 # _model_server_result.job_id 2hNcWtk0cC-hn4nKkwfcEg _model_server_result.datetime_utc '2025-07-03 15:01:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xa9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":905}' # _entry.id 7XA9 # _exptl.entry_id 7XA9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XA9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 301 A CYS 301 1_555 A SG CYS 306 A CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? disulf ? disulf2 A SG CYS 394 A CYS 394 1_555 A SG CYS 419 A CYS 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? disulf ? disulf3 A SG CYS 397 A CYS 397 1_555 A SG CYS 405 A CYS 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? disulf ? disulf4 B SG CYS 301 B CYS 301 1_555 B SG CYS 306 B CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? disulf ? disulf5 B SG CYS 394 B CYS 394 1_555 B SG CYS 419 B CYS 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? disulf ? disulf6 B SG CYS 397 B CYS 397 1_555 B SG CYS 405 B CYS 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc1 A OE1 GLU 55 A GLU 55 1_555 G MG MG . A MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc2 A OE2 GLU 55 A GLU 55 1_555 G MG MG . A MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc3 F O2B ATP . A ATP 904 1_555 G MG MG . A MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc4 B OE1 GLU 55 B GLU 55 1_555 L MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc5 B OE2 GLU 55 B GLU 55 1_555 L MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc6 K O2B ATP . B ATP 904 1_555 L MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XA9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NO3 A 1 901 802 NO3 NO3 . D 2 NO3 A 1 902 803 NO3 NO3 . E 2 NO3 A 1 903 804 NO3 NO3 . F 3 ATP A 1 904 805 ATP ATP . G 4 MG A 1 905 806 MG MG . H 2 NO3 B 1 901 802 NO3 NO3 . I 2 NO3 B 1 902 803 NO3 NO3 . J 2 NO3 B 1 903 804 NO3 NO3 . K 3 ATP B 1 904 805 ATP ATP . L 4 MG B 1 905 806 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 4 _atom_site.Cartn_x 208.361 _atom_site.Cartn_y 232.298 _atom_site.Cartn_z 240.35 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 905 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #