data_7XAX
#
_model_server_result.job_id            PpD6BKku-hahGQ37haCLWA 
_model_server_result.datetime_utc      '2025-01-29 05:50:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xax 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7XAX 
#
_exptl.entry_id    7XAX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              270.237 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90.951 
_cell.angle_beta          102.715 
_cell.angle_gamma         108.649 
_cell.entry_id            7XAX 
_cell.length_a            55.51 
_cell.length_b            60.55 
_cell.length_c            68.28 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XAX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            N 
_struct_conn.ptnr1_label_comp_id            GLY 
_struct_conn.ptnr1_label_seq_id             143 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             GLY 
_struct_conn.ptnr1_auth_seq_id              143 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            O3 
_struct_conn.ptnr2_label_comp_id            3WL 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             3WL 
_struct_conn.ptnr2_auth_seq_id              401 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.305 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C15 H10 O5' 
_chem_comp.formula_weight    270.237 
_chem_comp.id                3WL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Baicalein 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C5 C 3WL doub 1 n y 
C5 C4 3WL sing 2 n y 
C C1 3WL sing 3 n y 
C4 C3 3WL doub 4 n y 
C1 C2 3WL doub 5 n y 
C3 C2 3WL sing 6 n y 
C3 C6 3WL sing 7 n n 
C7 C6 3WL doub 8 n n 
C7 C8 3WL sing 9 n n 
O C8 3WL doub 10 n n 
C6 O1 3WL sing 11 n n 
C8 C9 3WL sing 12 n n 
O1 C14 3WL sing 13 n n 
C9 C14 3WL doub 14 n y 
C9 C10 3WL sing 15 n y 
O4 C10 3WL sing 16 n n 
C14 C13 3WL sing 17 n y 
C10 C11 3WL doub 18 n y 
C13 C12 3WL doub 19 n y 
C11 C12 3WL sing 20 n y 
C11 O3 3WL sing 21 n n 
C12 O2 3WL sing 22 n n 
C4 H1 3WL sing 23 n n 
C5 H2 3WL sing 24 n n 
C7 H3 3WL sing 25 n n 
C13 H4 3WL sing 26 n n 
O2 H5 3WL sing 27 n n 
O3 H6 3WL sing 28 n n 
O4 H7 3WL sing 29 n n 
C2 H8 3WL sing 30 n n 
C1 H9 3WL sing 31 n n 
C H10 3WL sing 32 n n 
#
_atom_sites.entry_id                     7XAX 
_atom_sites.fract_transf_matrix[1][1]    0.018015 
_atom_sites.fract_transf_matrix[1][2]    0.00608 
_atom_sites.fract_transf_matrix[1][3]    0.004658 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01743 
_atom_sites.fract_transf_matrix[2][3]    0.001648 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015081 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 3WL A 1 401 1 3WL 3WL . 
D 3 HOH A 1 501 85 HOH HOH . 
D 3 HOH A 2 502 42 HOH HOH . 
D 3 HOH A 3 503 77 HOH HOH . 
D 3 HOH A 4 504 81 HOH HOH . 
D 3 HOH A 5 505 15 HOH HOH . 
D 3 HOH A 6 506 24 HOH HOH . 
D 3 HOH A 7 507 41 HOH HOH . 
D 3 HOH A 8 508 35 HOH HOH . 
D 3 HOH A 9 509 50 HOH HOH . 
D 3 HOH A 10 510 66 HOH HOH . 
D 3 HOH A 11 511 57 HOH HOH . 
D 3 HOH A 12 512 91 HOH HOH . 
D 3 HOH A 13 513 3 HOH HOH . 
D 3 HOH A 14 514 22 HOH HOH . 
D 3 HOH A 15 515 72 HOH HOH . 
D 3 HOH A 16 516 63 HOH HOH . 
D 3 HOH A 17 517 32 HOH HOH . 
D 3 HOH A 18 518 87 HOH HOH . 
D 3 HOH A 19 519 4 HOH HOH . 
D 3 HOH A 20 520 36 HOH HOH . 
D 3 HOH A 21 521 9 HOH HOH . 
D 3 HOH A 22 522 5 HOH HOH . 
D 3 HOH A 23 523 69 HOH HOH . 
D 3 HOH A 24 524 25 HOH HOH . 
D 3 HOH A 25 525 2 HOH HOH . 
D 3 HOH A 26 526 83 HOH HOH . 
D 3 HOH A 27 527 78 HOH HOH . 
D 3 HOH A 28 528 44 HOH HOH . 
D 3 HOH A 29 529 21 HOH HOH . 
D 3 HOH A 30 530 6 HOH HOH . 
D 3 HOH A 31 531 8 HOH HOH . 
D 3 HOH A 32 532 28 HOH HOH . 
D 3 HOH A 33 533 54 HOH HOH . 
D 3 HOH A 34 534 49 HOH HOH . 
D 3 HOH A 35 535 47 HOH HOH . 
D 3 HOH A 36 536 20 HOH HOH . 
D 3 HOH A 37 537 75 HOH HOH . 
D 3 HOH A 38 538 65 HOH HOH . 
D 3 HOH A 39 539 76 HOH HOH . 
D 3 HOH A 40 540 79 HOH HOH . 
D 3 HOH A 41 541 17 HOH HOH . 
D 3 HOH A 42 542 90 HOH HOH . 
D 3 HOH A 43 543 34 HOH HOH . 
D 3 HOH A 44 544 61 HOH HOH . 
D 3 HOH A 45 545 56 HOH HOH . 
D 3 HOH A 46 546 62 HOH HOH . 
D 3 HOH A 47 547 80 HOH HOH . 
D 3 HOH A 48 548 37 HOH HOH . 
E 3 HOH B 1 401 71 HOH HOH . 
E 3 HOH B 2 402 70 HOH HOH . 
E 3 HOH B 3 403 13 HOH HOH . 
E 3 HOH B 4 404 89 HOH HOH . 
E 3 HOH B 5 405 38 HOH HOH . 
E 3 HOH B 6 406 64 HOH HOH . 
E 3 HOH B 7 407 7 HOH HOH . 
E 3 HOH B 8 408 33 HOH HOH . 
E 3 HOH B 9 409 52 HOH HOH . 
E 3 HOH B 10 410 31 HOH HOH . 
E 3 HOH B 11 411 30 HOH HOH . 
E 3 HOH B 12 412 27 HOH HOH . 
E 3 HOH B 13 413 12 HOH HOH . 
E 3 HOH B 14 414 23 HOH HOH . 
E 3 HOH B 15 415 59 HOH HOH . 
E 3 HOH B 16 416 67 HOH HOH . 
E 3 HOH B 17 417 45 HOH HOH . 
E 3 HOH B 18 418 68 HOH HOH . 
E 3 HOH B 19 419 1 HOH HOH . 
E 3 HOH B 20 420 11 HOH HOH . 
E 3 HOH B 21 421 10 HOH HOH . 
E 3 HOH B 22 422 18 HOH HOH . 
E 3 HOH B 23 423 48 HOH HOH . 
E 3 HOH B 24 424 16 HOH HOH . 
E 3 HOH B 25 425 46 HOH HOH . 
E 3 HOH B 26 426 55 HOH HOH . 
E 3 HOH B 27 427 53 HOH HOH . 
E 3 HOH B 28 428 40 HOH HOH . 
E 3 HOH B 29 429 73 HOH HOH . 
E 3 HOH B 30 430 29 HOH HOH . 
E 3 HOH B 31 431 39 HOH HOH . 
E 3 HOH B 32 432 14 HOH HOH . 
E 3 HOH B 33 433 26 HOH HOH . 
E 3 HOH B 34 434 86 HOH HOH . 
E 3 HOH B 35 435 58 HOH HOH . 
E 3 HOH B 36 436 43 HOH HOH . 
E 3 HOH B 37 437 88 HOH HOH . 
E 3 HOH B 38 438 19 HOH HOH . 
E 3 HOH B 39 439 84 HOH HOH . 
E 3 HOH B 40 440 51 HOH HOH . 
E 3 HOH B 41 441 82 HOH HOH . 
E 3 HOH B 42 442 60 HOH HOH . 
E 3 HOH B 43 443 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 3WL . . . C 2 67.226 -31.725 0.312 1 58.74 ? C4 3WL 401 A 1 
HETATM 2 C C5 3WL . . . C 2 68.395 -31.984 -0.389 1 63.8 ? C5 3WL 401 A 1 
HETATM 3 C C6 3WL . . . C 2 65.048 -32.671 1.217 1 56.2 ? C6 3WL 401 A 1 
HETATM 4 C C7 3WL . . . C 2 64.166 -33.692 0.914 1 52.83 ? C7 3WL 401 A 1 
HETATM 5 C C8 3WL . . . C 2 62.919 -33.73 1.582 1 59.02 ? C8 3WL 401 A 1 
HETATM 6 C C10 3WL . . . C 2 61.412 -32.68 3.262 1 59.31 ? C10 3WL 401 A 1 
HETATM 7 C C13 3WL . . . C 2 63.339 -30.702 3.749 1 56.35 ? C13 3WL 401 A 1 
HETATM 8 O O 3WL . . . C 2 61.976 -34.74 1.312 1 59.06 ? O 3WL 401 A 1 
HETATM 9 C C9 3WL . . . C 2 62.647 -32.675 2.552 1 62.56 ? C9 3WL 401 A 1 
HETATM 10 C C14 3WL . . . C 2 63.605 -31.724 2.781 1 58.37 ? C14 3WL 401 A 1 
HETATM 11 C C12 3WL . . . C 2 62.117 -30.703 4.432 1 61.64 ? C12 3WL 401 A 1 
HETATM 12 O O2 3WL . . . C 2 61.828 -29.704 5.375 1 69.25 ? O2 3WL 401 A 1 
HETATM 13 C C11 3WL . . . C 2 61.145 -31.682 4.201 1 57.73 ? C11 3WL 401 A 1 
HETATM 14 O O3 3WL . . . C 2 59.909 -31.639 4.894 1 63.66 ? O3 3WL 401 A 1 
HETATM 15 O O4 3WL . . . C 2 60.492 -33.702 2.974 1 54.38 ? O4 3WL 401 A 1 
HETATM 16 O O1 3WL . . . C 2 64.787 -31.744 2.112 1 61.33 ? O1 3WL 401 A 1 
HETATM 17 C C3 3WL . . . C 2 66.354 -32.77 0.47 1 55.04 ? C3 3WL 401 A 1 
HETATM 18 C C2 3WL . . . C 2 66.668 -34.025 -0.023 1 58.4 ? C2 3WL 401 A 1 
HETATM 19 C C1 3WL . . . C 2 67.841 -34.273 -0.717 1 57.75 ? C1 3WL 401 A 1 
HETATM 20 C C 3WL . . . C 2 68.722 -33.23 -0.902 1 60.64 ? C 3WL 401 A 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           586 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#