data_7XC1
#
_model_server_result.job_id            S9fSazWIveC0wAel0XapQw 
_model_server_result.datetime_utc      '2024-11-15 03:20:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xc1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":404}' 
#
_entry.id    7XC1 
#
_exptl.entry_id    7XC1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7XC1 
_cell.length_a            82.653 
_cell.length_b            82.653 
_cell.length_c            275.074 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XC1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,M 1 1 
B,I,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 K N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ASP 132 A ASP 124 1_555 A N NEP 133 A NEP 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale2 A C NEP 133 A NEP 125 1_555 A N ILE 134 A ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale3 B C ASP 132 B ASP 124 1_555 B N NEP 133 B NEP 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale4 B C NEP 133 B NEP 125 1_555 B N ILE 134 B ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 246 n n 
C1 C2 GOL sing 247 n n 
C1 H11 GOL sing 248 n n 
C1 H12 GOL sing 249 n n 
O1 HO1 GOL sing 250 n n 
C2 O2 GOL sing 251 n n 
C2 C3 GOL sing 252 n n 
C2 H2 GOL sing 253 n n 
O2 HO2 GOL sing 254 n n 
C3 O3 GOL sing 255 n n 
C3 H31 GOL sing 256 n n 
C3 H32 GOL sing 257 n n 
O3 HO3 GOL sing 258 n n 
#
_atom_sites.entry_id                     7XC1 
_atom_sites.fract_transf_matrix[1][1]    0.012099 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012099 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003635 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 5ID A 1 401 401 5ID 5ID . 
D 3 EPE A 1 402 501 EPE EPE . 
E 4 GOL A 1 403 601 GOL GOL . 
F 4 GOL A 1 404 701 GOL GOL . 
G 5 B8Z A 1 405 901 B8Z HT2 . 
H 6 SO4 A 1 406 1 SO4 SO4 . 
I 3 EPE B 1 401 401 EPE EPE . 
J 2 5ID B 1 402 501 5ID 5ID . 
K 4 GOL B 1 403 601 GOL GOL . 
L 4 GOL B 1 404 701 GOL GOL . 
M 7 HOH A 1 501 8 HOH HOH . 
M 7 HOH A 2 502 15 HOH HOH . 
M 7 HOH A 3 503 52 HOH HOH . 
M 7 HOH A 4 504 180 HOH HOH . 
M 7 HOH A 5 505 175 HOH HOH . 
M 7 HOH A 6 506 14 HOH HOH . 
M 7 HOH A 7 507 27 HOH HOH . 
M 7 HOH A 8 508 97 HOH HOH . 
M 7 HOH A 9 509 123 HOH HOH . 
M 7 HOH A 10 510 106 HOH HOH . 
M 7 HOH A 11 511 12 HOH HOH . 
M 7 HOH A 12 512 53 HOH HOH . 
M 7 HOH A 13 513 176 HOH HOH . 
M 7 HOH A 14 514 16 HOH HOH . 
M 7 HOH A 15 515 173 HOH HOH . 
M 7 HOH A 16 516 177 HOH HOH . 
M 7 HOH A 17 517 28 HOH HOH . 
M 7 HOH A 18 518 121 HOH HOH . 
M 7 HOH A 19 519 23 HOH HOH . 
M 7 HOH A 20 520 57 HOH HOH . 
M 7 HOH A 21 521 18 HOH HOH . 
M 7 HOH A 22 522 124 HOH HOH . 
M 7 HOH A 23 523 44 HOH HOH . 
M 7 HOH A 24 524 113 HOH HOH . 
M 7 HOH A 25 525 31 HOH HOH . 
M 7 HOH A 26 526 102 HOH HOH . 
M 7 HOH A 27 527 99 HOH HOH . 
M 7 HOH A 28 528 22 HOH HOH . 
M 7 HOH A 29 529 45 HOH HOH . 
M 7 HOH A 30 530 139 HOH HOH . 
M 7 HOH A 31 531 17 HOH HOH . 
M 7 HOH A 32 532 50 HOH HOH . 
M 7 HOH A 33 533 129 HOH HOH . 
M 7 HOH A 34 534 56 HOH HOH . 
M 7 HOH A 35 535 24 HOH HOH . 
M 7 HOH A 36 536 148 HOH HOH . 
M 7 HOH A 37 537 118 HOH HOH . 
M 7 HOH A 38 538 39 HOH HOH . 
M 7 HOH A 39 539 100 HOH HOH . 
M 7 HOH A 40 540 91 HOH HOH . 
M 7 HOH A 41 541 7 HOH HOH . 
M 7 HOH A 42 542 131 HOH HOH . 
M 7 HOH A 43 543 119 HOH HOH . 
M 7 HOH A 44 544 9 HOH HOH . 
M 7 HOH A 45 545 117 HOH HOH . 
M 7 HOH A 46 546 109 HOH HOH . 
M 7 HOH A 47 547 29 HOH HOH . 
M 7 HOH A 48 548 112 HOH HOH . 
M 7 HOH A 49 549 108 HOH HOH . 
M 7 HOH A 50 550 153 HOH HOH . 
M 7 HOH A 51 551 128 HOH HOH . 
M 7 HOH A 52 552 95 HOH HOH . 
M 7 HOH A 53 553 107 HOH HOH . 
M 7 HOH A 54 554 38 HOH HOH . 
M 7 HOH A 55 555 126 HOH HOH . 
M 7 HOH A 56 556 93 HOH HOH . 
M 7 HOH A 57 557 43 HOH HOH . 
M 7 HOH A 58 558 42 HOH HOH . 
M 7 HOH A 59 559 13 HOH HOH . 
M 7 HOH A 60 560 110 HOH HOH . 
M 7 HOH A 61 561 154 HOH HOH . 
M 7 HOH A 62 562 6 HOH HOH . 
M 7 HOH A 63 563 3 HOH HOH . 
M 7 HOH A 64 564 25 HOH HOH . 
M 7 HOH A 65 565 174 HOH HOH . 
M 7 HOH A 66 566 21 HOH HOH . 
M 7 HOH A 67 567 98 HOH HOH . 
M 7 HOH A 68 568 130 HOH HOH . 
M 7 HOH A 69 569 30 HOH HOH . 
M 7 HOH A 70 570 137 HOH HOH . 
M 7 HOH A 71 571 40 HOH HOH . 
M 7 HOH A 72 572 185 HOH HOH . 
M 7 HOH A 73 573 10 HOH HOH . 
M 7 HOH A 74 574 143 HOH HOH . 
M 7 HOH A 75 575 145 HOH HOH . 
M 7 HOH A 76 576 138 HOH HOH . 
M 7 HOH A 77 577 166 HOH HOH . 
M 7 HOH A 78 578 85 HOH HOH . 
M 7 HOH A 79 579 54 HOH HOH . 
M 7 HOH A 80 580 168 HOH HOH . 
M 7 HOH A 81 581 171 HOH HOH . 
M 7 HOH A 82 582 11 HOH HOH . 
M 7 HOH A 83 583 141 HOH HOH . 
M 7 HOH A 84 584 48 HOH HOH . 
M 7 HOH A 85 585 133 HOH HOH . 
M 7 HOH A 86 586 172 HOH HOH . 
M 7 HOH A 87 587 146 HOH HOH . 
M 7 HOH A 88 588 46 HOH HOH . 
M 7 HOH A 89 589 152 HOH HOH . 
M 7 HOH A 90 590 58 HOH HOH . 
M 7 HOH A 91 591 144 HOH HOH . 
M 7 HOH A 92 592 51 HOH HOH . 
M 7 HOH A 93 593 135 HOH HOH . 
M 7 HOH A 94 594 19 HOH HOH . 
M 7 HOH A 95 595 20 HOH HOH . 
M 7 HOH A 96 596 170 HOH HOH . 
M 7 HOH A 97 597 134 HOH HOH . 
M 7 HOH A 98 598 49 HOH HOH . 
M 7 HOH A 99 599 59 HOH HOH . 
M 7 HOH A 100 600 167 HOH HOH . 
M 7 HOH A 101 601 184 HOH HOH . 
M 7 HOH A 102 602 41 HOH HOH . 
M 7 HOH A 103 603 47 HOH HOH . 
M 7 HOH A 104 604 142 HOH HOH . 
M 7 HOH A 105 605 183 HOH HOH . 
N 7 HOH B 1 501 60 HOH HOH . 
N 7 HOH B 2 502 64 HOH HOH . 
N 7 HOH B 3 503 80 HOH HOH . 
N 7 HOH B 4 504 61 HOH HOH . 
N 7 HOH B 5 505 79 HOH HOH . 
N 7 HOH B 6 506 96 HOH HOH . 
N 7 HOH B 7 507 66 HOH HOH . 
N 7 HOH B 8 508 151 HOH HOH . 
N 7 HOH B 9 509 116 HOH HOH . 
N 7 HOH B 10 510 88 HOH HOH . 
N 7 HOH B 11 511 71 HOH HOH . 
N 7 HOH B 12 512 86 HOH HOH . 
N 7 HOH B 13 513 82 HOH HOH . 
N 7 HOH B 14 514 157 HOH HOH . 
N 7 HOH B 15 515 178 HOH HOH . 
N 7 HOH B 16 516 114 HOH HOH . 
N 7 HOH B 17 517 73 HOH HOH . 
N 7 HOH B 18 518 74 HOH HOH . 
N 7 HOH B 19 519 65 HOH HOH . 
N 7 HOH B 20 520 67 HOH HOH . 
N 7 HOH B 21 521 89 HOH HOH . 
N 7 HOH B 22 522 94 HOH HOH . 
N 7 HOH B 23 523 181 HOH HOH . 
N 7 HOH B 24 524 125 HOH HOH . 
N 7 HOH B 25 525 92 HOH HOH . 
N 7 HOH B 26 526 122 HOH HOH . 
N 7 HOH B 27 527 159 HOH HOH . 
N 7 HOH B 28 528 149 HOH HOH . 
N 7 HOH B 29 529 81 HOH HOH . 
N 7 HOH B 30 530 115 HOH HOH . 
N 7 HOH B 31 531 34 HOH HOH . 
N 7 HOH B 32 532 104 HOH HOH . 
N 7 HOH B 33 533 69 HOH HOH . 
N 7 HOH B 34 534 127 HOH HOH . 
N 7 HOH B 35 535 182 HOH HOH . 
N 7 HOH B 36 536 105 HOH HOH . 
N 7 HOH B 37 537 179 HOH HOH . 
N 7 HOH B 38 538 160 HOH HOH . 
N 7 HOH B 39 539 120 HOH HOH . 
N 7 HOH B 40 540 103 HOH HOH . 
N 7 HOH B 41 541 111 HOH HOH . 
N 7 HOH B 42 542 132 HOH HOH . 
N 7 HOH B 43 543 4 HOH HOH . 
N 7 HOH B 44 544 68 HOH HOH . 
N 7 HOH B 45 545 150 HOH HOH . 
N 7 HOH B 46 546 83 HOH HOH . 
N 7 HOH B 47 547 84 HOH HOH . 
N 7 HOH B 48 548 162 HOH HOH . 
N 7 HOH B 49 549 32 HOH HOH . 
N 7 HOH B 50 550 136 HOH HOH . 
N 7 HOH B 51 551 76 HOH HOH . 
N 7 HOH B 52 552 70 HOH HOH . 
N 7 HOH B 53 553 72 HOH HOH . 
N 7 HOH B 54 554 161 HOH HOH . 
N 7 HOH B 55 555 101 HOH HOH . 
N 7 HOH B 56 556 156 HOH HOH . 
N 7 HOH B 57 557 33 HOH HOH . 
N 7 HOH B 58 558 63 HOH HOH . 
N 7 HOH B 59 559 87 HOH HOH . 
N 7 HOH B 60 560 90 HOH HOH . 
N 7 HOH B 61 561 155 HOH HOH . 
N 7 HOH B 62 562 158 HOH HOH . 
N 7 HOH B 63 563 163 HOH HOH . 
N 7 HOH B 64 564 26 HOH HOH . 
N 7 HOH B 65 565 140 HOH HOH . 
N 7 HOH B 66 566 169 HOH HOH . 
N 7 HOH B 67 567 36 HOH HOH . 
N 7 HOH B 68 568 75 HOH HOH . 
N 7 HOH B 69 569 55 HOH HOH . 
N 7 HOH B 70 570 165 HOH HOH . 
N 7 HOH B 71 571 147 HOH HOH . 
N 7 HOH B 72 572 77 HOH HOH . 
N 7 HOH B 73 573 164 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 14.011 -21.159 -31.317 1 66.42 ? C1 GOL 404 A 1 
HETATM 2 O O1 GOL . . . F 4 14.706 -20.185 -30.584 1 74.14 ? O1 GOL 404 A 1 
HETATM 3 C C2 GOL . . . F 4 15.002 -21.834 -32.336 1 71.09 ? C2 GOL 404 A 1 
HETATM 4 O O2 GOL . . . F 4 15.971 -22.581 -31.676 1 73.99 ? O2 GOL 404 A 1 
HETATM 5 C C3 GOL . . . F 4 14.05 -22.606 -33.279 1 63.68 ? C3 GOL 404 A 1 
HETATM 6 O O3 GOL . . . F 4 14.806 -23.666 -33.938 1 65.06 ? O3 GOL 404 A 1 
HETATM 7 H H11 GOL . . . F 4 13.264 -20.784 -31.81 1 79.7 ? H11 GOL 404 A 1 
HETATM 8 H H12 GOL . . . F 4 13.633 -21.847 -30.747 1 79.7 ? H12 GOL 404 A 1 
HETATM 9 H HO1 GOL . . . F 4 14.117 -19.653 -30.268 1 88.97 ? HO1 GOL 404 A 1 
HETATM 10 H H2 GOL . . . F 4 15.529 -21.208 -32.856 1 85.31 ? H2 GOL 404 A 1 
HETATM 11 H HO2 GOL . . . F 4 16.466 -22.032 -31.238 1 88.79 ? HO2 GOL 404 A 1 
HETATM 12 H H31 GOL . . . F 4 13.659 -21.975 -33.903 1 76.42 ? H31 GOL 404 A 1 
HETATM 13 H H32 GOL . . . F 4 13.306 -22.941 -32.754 1 76.42 ? H32 GOL 404 A 1 
HETATM 14 H HO3 GOL . . . F 4 14.841 -23.467 -34.766 1 78.07 ? HO3 GOL 404 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           14 
#