data_7XE5 # _model_server_result.job_id aASQ9tWSqHdTmUrfiWNiqg _model_server_result.datetime_utc '2024-10-12 22:17:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xe5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7XE5 # _exptl.entry_id 7XE5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7XE5 _cell.length_a 60.295 _cell.length_b 60.295 _cell.length_c 96.872 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 44 1_555 A SG CYS 115 A CYS 115 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 68 A CYS 68 1_555 A SG CYS 93 A CYS 93 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7XE5 _atom_sites.fract_transf_matrix[1][1] 0.016585 _atom_sites.fract_transf_matrix[1][2] 0.009575 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019151 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 202 GOL GOL . C 2 GOL A 1 202 204 GOL GOL . D 3 HEZ A 1 203 207 HEZ HEZ . E 2 GOL A 1 204 208 GOL GOL . F 3 HEZ A 1 205 209 HEZ HEZ . G 4 PO4 A 1 206 1 PO4 PO4 . H 5 NA A 1 207 1 NA NA . I 6 HOH A 1 301 209 HOH HOH . I 6 HOH A 2 302 117 HOH HOH . I 6 HOH A 3 303 142 HOH HOH . I 6 HOH A 4 304 69 HOH HOH . I 6 HOH A 5 305 124 HOH HOH . I 6 HOH A 6 306 159 HOH HOH . I 6 HOH A 7 307 46 HOH HOH . I 6 HOH A 8 308 203 HOH HOH . I 6 HOH A 9 309 218 HOH HOH . I 6 HOH A 10 310 193 HOH HOH . I 6 HOH A 11 311 167 HOH HOH . I 6 HOH A 12 312 163 HOH HOH . I 6 HOH A 13 313 154 HOH HOH . I 6 HOH A 14 314 25 HOH HOH . I 6 HOH A 15 315 116 HOH HOH . I 6 HOH A 16 316 38 HOH HOH . I 6 HOH A 17 317 91 HOH HOH . I 6 HOH A 18 318 180 HOH HOH . I 6 HOH A 19 319 178 HOH HOH . I 6 HOH A 20 320 153 HOH HOH . I 6 HOH A 21 321 188 HOH HOH . I 6 HOH A 22 322 22 HOH HOH . I 6 HOH A 23 323 156 HOH HOH . I 6 HOH A 24 324 51 HOH HOH . I 6 HOH A 25 325 161 HOH HOH . I 6 HOH A 26 326 192 HOH HOH . I 6 HOH A 27 327 131 HOH HOH . I 6 HOH A 28 328 52 HOH HOH . I 6 HOH A 29 329 226 HOH HOH . I 6 HOH A 30 330 164 HOH HOH . I 6 HOH A 31 331 181 HOH HOH . I 6 HOH A 32 332 88 HOH HOH . I 6 HOH A 33 333 144 HOH HOH . I 6 HOH A 34 334 44 HOH HOH . I 6 HOH A 35 335 127 HOH HOH . I 6 HOH A 36 336 185 HOH HOH . I 6 HOH A 37 337 225 HOH HOH . I 6 HOH A 38 338 84 HOH HOH . I 6 HOH A 39 339 126 HOH HOH . I 6 HOH A 40 340 57 HOH HOH . I 6 HOH A 41 341 134 HOH HOH . I 6 HOH A 42 342 97 HOH HOH . I 6 HOH A 43 343 90 HOH HOH . I 6 HOH A 44 344 120 HOH HOH . I 6 HOH A 45 345 75 HOH HOH . I 6 HOH A 46 346 109 HOH HOH . I 6 HOH A 47 347 8 HOH HOH . I 6 HOH A 48 348 24 HOH HOH . I 6 HOH A 49 349 132 HOH HOH . I 6 HOH A 50 350 2 HOH HOH . I 6 HOH A 51 351 10 HOH HOH . I 6 HOH A 52 352 87 HOH HOH . I 6 HOH A 53 353 67 HOH HOH . I 6 HOH A 54 354 49 HOH HOH . I 6 HOH A 55 355 4 HOH HOH . I 6 HOH A 56 356 128 HOH HOH . I 6 HOH A 57 357 33 HOH HOH . I 6 HOH A 58 358 190 HOH HOH . I 6 HOH A 59 359 79 HOH HOH . I 6 HOH A 60 360 29 HOH HOH . I 6 HOH A 61 361 65 HOH HOH . I 6 HOH A 62 362 151 HOH HOH . I 6 HOH A 63 363 83 HOH HOH . I 6 HOH A 64 364 74 HOH HOH . I 6 HOH A 65 365 6 HOH HOH . I 6 HOH A 66 366 119 HOH HOH . I 6 HOH A 67 367 23 HOH HOH . I 6 HOH A 68 368 43 HOH HOH . I 6 HOH A 69 369 15 HOH HOH . I 6 HOH A 70 370 140 HOH HOH . I 6 HOH A 71 371 9 HOH HOH . I 6 HOH A 72 372 58 HOH HOH . I 6 HOH A 73 373 222 HOH HOH . I 6 HOH A 74 374 105 HOH HOH . I 6 HOH A 75 375 146 HOH HOH . I 6 HOH A 76 376 80 HOH HOH . I 6 HOH A 77 377 86 HOH HOH . I 6 HOH A 78 378 3 HOH HOH . I 6 HOH A 79 379 40 HOH HOH . I 6 HOH A 80 380 62 HOH HOH . I 6 HOH A 81 381 19 HOH HOH . I 6 HOH A 82 382 241 HOH HOH . I 6 HOH A 83 383 78 HOH HOH . I 6 HOH A 84 384 54 HOH HOH . I 6 HOH A 85 385 133 HOH HOH . I 6 HOH A 86 386 123 HOH HOH . I 6 HOH A 87 387 5 HOH HOH . I 6 HOH A 88 388 138 HOH HOH . I 6 HOH A 89 389 32 HOH HOH . I 6 HOH A 90 390 27 HOH HOH . I 6 HOH A 91 391 14 HOH HOH . I 6 HOH A 92 392 7 HOH HOH . I 6 HOH A 93 393 64 HOH HOH . I 6 HOH A 94 394 169 HOH HOH . I 6 HOH A 95 395 71 HOH HOH . I 6 HOH A 96 396 34 HOH HOH . I 6 HOH A 97 397 53 HOH HOH . I 6 HOH A 98 398 183 HOH HOH . I 6 HOH A 99 399 179 HOH HOH . I 6 HOH A 100 400 160 HOH HOH . I 6 HOH A 101 401 17 HOH HOH . I 6 HOH A 102 402 145 HOH HOH . I 6 HOH A 103 403 20 HOH HOH . I 6 HOH A 104 404 114 HOH HOH . I 6 HOH A 105 405 76 HOH HOH . I 6 HOH A 106 406 37 HOH HOH . I 6 HOH A 107 407 11 HOH HOH . I 6 HOH A 108 408 245 HOH HOH . I 6 HOH A 109 409 235 HOH HOH . I 6 HOH A 110 410 13 HOH HOH . I 6 HOH A 111 411 39 HOH HOH . I 6 HOH A 112 412 61 HOH HOH . I 6 HOH A 113 413 165 HOH HOH . I 6 HOH A 114 414 115 HOH HOH . I 6 HOH A 115 415 60 HOH HOH . I 6 HOH A 116 416 207 HOH HOH . I 6 HOH A 117 417 198 HOH HOH . I 6 HOH A 118 418 112 HOH HOH . I 6 HOH A 119 419 152 HOH HOH . I 6 HOH A 120 420 118 HOH HOH . I 6 HOH A 121 421 216 HOH HOH . I 6 HOH A 122 422 125 HOH HOH . I 6 HOH A 123 423 48 HOH HOH . I 6 HOH A 124 424 68 HOH HOH . I 6 HOH A 125 425 107 HOH HOH . I 6 HOH A 126 426 30 HOH HOH . I 6 HOH A 127 427 240 HOH HOH . I 6 HOH A 128 428 56 HOH HOH . I 6 HOH A 129 429 98 HOH HOH . I 6 HOH A 130 430 41 HOH HOH . I 6 HOH A 131 431 1 HOH HOH . I 6 HOH A 132 432 31 HOH HOH . I 6 HOH A 133 433 143 HOH HOH . I 6 HOH A 134 434 28 HOH HOH . I 6 HOH A 135 435 47 HOH HOH . I 6 HOH A 136 436 221 HOH HOH . I 6 HOH A 137 437 99 HOH HOH . I 6 HOH A 138 438 16 HOH HOH . I 6 HOH A 139 439 208 HOH HOH . I 6 HOH A 140 440 229 HOH HOH . I 6 HOH A 141 441 70 HOH HOH . I 6 HOH A 142 442 96 HOH HOH . I 6 HOH A 143 443 21 HOH HOH . I 6 HOH A 144 444 93 HOH HOH . I 6 HOH A 145 445 186 HOH HOH . I 6 HOH A 146 446 182 HOH HOH . I 6 HOH A 147 447 12 HOH HOH . I 6 HOH A 148 448 82 HOH HOH . I 6 HOH A 149 449 45 HOH HOH . I 6 HOH A 150 450 72 HOH HOH . I 6 HOH A 151 451 103 HOH HOH . I 6 HOH A 152 452 18 HOH HOH . I 6 HOH A 153 453 158 HOH HOH . I 6 HOH A 154 454 104 HOH HOH . I 6 HOH A 155 455 177 HOH HOH . I 6 HOH A 156 456 212 HOH HOH . I 6 HOH A 157 457 191 HOH HOH . I 6 HOH A 158 458 174 HOH HOH . I 6 HOH A 159 459 139 HOH HOH . I 6 HOH A 160 460 215 HOH HOH . I 6 HOH A 161 461 92 HOH HOH . I 6 HOH A 162 462 110 HOH HOH . I 6 HOH A 163 463 35 HOH HOH . I 6 HOH A 164 464 155 HOH HOH . I 6 HOH A 165 465 197 HOH HOH . I 6 HOH A 166 466 199 HOH HOH . I 6 HOH A 167 467 95 HOH HOH . I 6 HOH A 168 468 202 HOH HOH . I 6 HOH A 169 469 102 HOH HOH . I 6 HOH A 170 470 204 HOH HOH . I 6 HOH A 171 471 73 HOH HOH . I 6 HOH A 172 472 36 HOH HOH . I 6 HOH A 173 473 111 HOH HOH . I 6 HOH A 174 474 242 HOH HOH . I 6 HOH A 175 475 211 HOH HOH . I 6 HOH A 176 476 168 HOH HOH . I 6 HOH A 177 477 108 HOH HOH . I 6 HOH A 178 478 42 HOH HOH . I 6 HOH A 179 479 184 HOH HOH . I 6 HOH A 180 480 232 HOH HOH . I 6 HOH A 181 481 243 HOH HOH . I 6 HOH A 182 482 176 HOH HOH . I 6 HOH A 183 483 166 HOH HOH . I 6 HOH A 184 484 210 HOH HOH . I 6 HOH A 185 485 237 HOH HOH . I 6 HOH A 186 486 233 HOH HOH . I 6 HOH A 187 487 196 HOH HOH . I 6 HOH A 188 488 194 HOH HOH . I 6 HOH A 189 489 59 HOH HOH . I 6 HOH A 190 490 239 HOH HOH . I 6 HOH A 191 491 149 HOH HOH . I 6 HOH A 192 492 162 HOH HOH . I 6 HOH A 193 493 238 HOH HOH . I 6 HOH A 194 494 213 HOH HOH . I 6 HOH A 195 495 150 HOH HOH . I 6 HOH A 196 496 228 HOH HOH . I 6 HOH A 197 497 141 HOH HOH . I 6 HOH A 198 498 122 HOH HOH . I 6 HOH A 199 499 136 HOH HOH . I 6 HOH A 200 500 157 HOH HOH . I 6 HOH A 201 501 205 HOH HOH . I 6 HOH A 202 502 130 HOH HOH . I 6 HOH A 203 503 170 HOH HOH . I 6 HOH A 204 504 113 HOH HOH . I 6 HOH A 205 505 219 HOH HOH . I 6 HOH A 206 506 173 HOH HOH . I 6 HOH A 207 507 220 HOH HOH . I 6 HOH A 208 508 189 HOH HOH . I 6 HOH A 209 509 236 HOH HOH . I 6 HOH A 210 510 148 HOH HOH . I 6 HOH A 211 511 101 HOH HOH . I 6 HOH A 212 512 200 HOH HOH . I 6 HOH A 213 513 147 HOH HOH . I 6 HOH A 214 514 187 HOH HOH . I 6 HOH A 215 515 94 HOH HOH . I 6 HOH A 216 516 231 HOH HOH . I 6 HOH A 217 517 135 HOH HOH . I 6 HOH A 218 518 26 HOH HOH . I 6 HOH A 219 519 224 HOH HOH . I 6 HOH A 220 520 121 HOH HOH . I 6 HOH A 221 521 63 HOH HOH . I 6 HOH A 222 522 175 HOH HOH . I 6 HOH A 223 523 223 HOH HOH . I 6 HOH A 224 524 55 HOH HOH . I 6 HOH A 225 525 195 HOH HOH . I 6 HOH A 226 526 106 HOH HOH . I 6 HOH A 227 527 77 HOH HOH . I 6 HOH A 228 528 244 HOH HOH . I 6 HOH A 229 529 129 HOH HOH . I 6 HOH A 230 530 85 HOH HOH . I 6 HOH A 231 531 100 HOH HOH . I 6 HOH A 232 532 137 HOH HOH . I 6 HOH A 233 533 206 HOH HOH . I 6 HOH A 234 534 234 HOH HOH . I 6 HOH A 235 535 214 HOH HOH . I 6 HOH A 236 536 89 HOH HOH . I 6 HOH A 237 537 81 HOH HOH . I 6 HOH A 238 538 66 HOH HOH . I 6 HOH A 239 539 172 HOH HOH . I 6 HOH A 240 540 50 HOH HOH . I 6 HOH A 241 541 217 HOH HOH . I 6 HOH A 242 542 230 HOH HOH . I 6 HOH A 243 543 171 HOH HOH . I 6 HOH A 244 544 201 HOH HOH . I 6 HOH A 245 545 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 13.415 -13.495 5.905 1 55.83 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . C 2 14.474 -12.981 6.657 1 54.68 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . C 2 12.815 -12.319 5.091 1 57.36 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . C 2 11.881 -12.753 4.159 1 58.67 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . C 2 12.191 -11.374 6.148 1 57.56 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . C 2 11.507 -10.38 5.447 1 57.59 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #