data_7XE9 # _model_server_result.job_id LROXlG_hi2Fm2hgwQOX9wg _model_server_result.datetime_utc '2024-10-12 22:16:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xe9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":208}' # _entry.id 7XE9 # _exptl.entry_id 7XE9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7XE9 _cell.length_a 59.873 _cell.length_b 59.873 _cell.length_c 96.03 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XE9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 44 1_555 A SG CYS 115 A CYS 115 3_655 ? A ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 44 A CYS 44 1_555 A SG CYS 115 A CYS 115 3_655 ? C ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 68 A CYS 68 1_555 A SG CYS 93 A CYS 93 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A O ASP 20 A ASP 20 1_555 I NA NA . A NA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XE9 _atom_sites.fract_transf_matrix[1][1] 0.016702 _atom_sites.fract_transf_matrix[1][2] 0.009643 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 203 GOL GOL . C 3 DMS A 1 202 206 DMS DMS . D 4 HEZ A 1 203 207 HEZ HEZ . E 3 DMS A 1 204 208 DMS DMS . F 4 HEZ A 1 205 209 HEZ HEZ . G 3 DMS A 1 206 210 DMS DMS . H 2 GOL A 1 207 211 GOL GOL . I 5 NA A 1 208 1 NA NA . J 6 CL A 1 209 1 CL CL . K 7 HOH A 1 301 88 HOH HOH . K 7 HOH A 2 302 93 HOH HOH . K 7 HOH A 3 303 143 HOH HOH . K 7 HOH A 4 304 47 HOH HOH . K 7 HOH A 5 305 64 HOH HOH . K 7 HOH A 6 306 84 HOH HOH . K 7 HOH A 7 307 51 HOH HOH . K 7 HOH A 8 308 94 HOH HOH . K 7 HOH A 9 309 20 HOH HOH . K 7 HOH A 10 310 14 HOH HOH . K 7 HOH A 11 311 55 HOH HOH . K 7 HOH A 12 312 80 HOH HOH . K 7 HOH A 13 313 56 HOH HOH . K 7 HOH A 14 314 4 HOH HOH . K 7 HOH A 15 315 2 HOH HOH . K 7 HOH A 16 316 68 HOH HOH . K 7 HOH A 17 317 48 HOH HOH . K 7 HOH A 18 318 67 HOH HOH . K 7 HOH A 19 319 10 HOH HOH . K 7 HOH A 20 320 23 HOH HOH . K 7 HOH A 21 321 87 HOH HOH . K 7 HOH A 22 322 30 HOH HOH . K 7 HOH A 23 323 33 HOH HOH . K 7 HOH A 24 324 58 HOH HOH . K 7 HOH A 25 325 3 HOH HOH . K 7 HOH A 26 326 19 HOH HOH . K 7 HOH A 27 327 6 HOH HOH . K 7 HOH A 28 328 5 HOH HOH . K 7 HOH A 29 329 60 HOH HOH . K 7 HOH A 30 330 8 HOH HOH . K 7 HOH A 31 331 50 HOH HOH . K 7 HOH A 32 332 17 HOH HOH . K 7 HOH A 33 333 77 HOH HOH . K 7 HOH A 34 334 9 HOH HOH . K 7 HOH A 35 335 95 HOH HOH . K 7 HOH A 36 336 29 HOH HOH . K 7 HOH A 37 337 32 HOH HOH . K 7 HOH A 38 338 35 HOH HOH . K 7 HOH A 39 339 89 HOH HOH . K 7 HOH A 40 340 7 HOH HOH . K 7 HOH A 41 341 39 HOH HOH . K 7 HOH A 42 342 28 HOH HOH . K 7 HOH A 43 343 37 HOH HOH . K 7 HOH A 44 344 144 HOH HOH . K 7 HOH A 45 345 70 HOH HOH . K 7 HOH A 46 346 43 HOH HOH . K 7 HOH A 47 347 123 HOH HOH . K 7 HOH A 48 348 44 HOH HOH . K 7 HOH A 49 349 82 HOH HOH . K 7 HOH A 50 350 97 HOH HOH . K 7 HOH A 51 351 41 HOH HOH . K 7 HOH A 52 352 38 HOH HOH . K 7 HOH A 53 353 86 HOH HOH . K 7 HOH A 54 354 53 HOH HOH . K 7 HOH A 55 355 42 HOH HOH . K 7 HOH A 56 356 57 HOH HOH . K 7 HOH A 57 357 132 HOH HOH . K 7 HOH A 58 358 13 HOH HOH . K 7 HOH A 59 359 75 HOH HOH . K 7 HOH A 60 360 83 HOH HOH . K 7 HOH A 61 361 27 HOH HOH . K 7 HOH A 62 362 25 HOH HOH . K 7 HOH A 63 363 46 HOH HOH . K 7 HOH A 64 364 78 HOH HOH . K 7 HOH A 65 365 108 HOH HOH . K 7 HOH A 66 366 11 HOH HOH . K 7 HOH A 67 367 113 HOH HOH . K 7 HOH A 68 368 76 HOH HOH . K 7 HOH A 69 369 147 HOH HOH . K 7 HOH A 70 370 72 HOH HOH . K 7 HOH A 71 371 24 HOH HOH . K 7 HOH A 72 372 74 HOH HOH . K 7 HOH A 73 373 52 HOH HOH . K 7 HOH A 74 374 31 HOH HOH . K 7 HOH A 75 375 122 HOH HOH . K 7 HOH A 76 376 59 HOH HOH . K 7 HOH A 77 377 36 HOH HOH . K 7 HOH A 78 378 100 HOH HOH . K 7 HOH A 79 379 12 HOH HOH . K 7 HOH A 80 380 15 HOH HOH . K 7 HOH A 81 381 85 HOH HOH . K 7 HOH A 82 382 61 HOH HOH . K 7 HOH A 83 383 135 HOH HOH . K 7 HOH A 84 384 1 HOH HOH . K 7 HOH A 85 385 16 HOH HOH . K 7 HOH A 86 386 148 HOH HOH . K 7 HOH A 87 387 18 HOH HOH . K 7 HOH A 88 388 129 HOH HOH . K 7 HOH A 89 389 145 HOH HOH . K 7 HOH A 90 390 120 HOH HOH . K 7 HOH A 91 391 45 HOH HOH . K 7 HOH A 92 392 26 HOH HOH . K 7 HOH A 93 393 22 HOH HOH . K 7 HOH A 94 394 118 HOH HOH . K 7 HOH A 95 395 90 HOH HOH . K 7 HOH A 96 396 96 HOH HOH . K 7 HOH A 97 397 105 HOH HOH . K 7 HOH A 98 398 103 HOH HOH . K 7 HOH A 99 399 73 HOH HOH . K 7 HOH A 100 400 134 HOH HOH . K 7 HOH A 101 401 128 HOH HOH . K 7 HOH A 102 402 40 HOH HOH . K 7 HOH A 103 403 66 HOH HOH . K 7 HOH A 104 404 91 HOH HOH . K 7 HOH A 105 405 104 HOH HOH . K 7 HOH A 106 406 92 HOH HOH . K 7 HOH A 107 407 110 HOH HOH . K 7 HOH A 108 408 79 HOH HOH . K 7 HOH A 109 409 121 HOH HOH . K 7 HOH A 110 410 140 HOH HOH . K 7 HOH A 111 411 71 HOH HOH . K 7 HOH A 112 412 107 HOH HOH . K 7 HOH A 113 413 69 HOH HOH . K 7 HOH A 114 414 126 HOH HOH . K 7 HOH A 115 415 63 HOH HOH . K 7 HOH A 116 416 125 HOH HOH . K 7 HOH A 117 417 49 HOH HOH . K 7 HOH A 118 418 124 HOH HOH . K 7 HOH A 119 419 98 HOH HOH . K 7 HOH A 120 420 99 HOH HOH . K 7 HOH A 121 421 137 HOH HOH . K 7 HOH A 122 422 101 HOH HOH . K 7 HOH A 123 423 81 HOH HOH . K 7 HOH A 124 424 127 HOH HOH . K 7 HOH A 125 425 54 HOH HOH . K 7 HOH A 126 426 117 HOH HOH . K 7 HOH A 127 427 141 HOH HOH . K 7 HOH A 128 428 133 HOH HOH . K 7 HOH A 129 429 34 HOH HOH . K 7 HOH A 130 430 138 HOH HOH . K 7 HOH A 131 431 139 HOH HOH . K 7 HOH A 132 432 21 HOH HOH . K 7 HOH A 133 433 131 HOH HOH . K 7 HOH A 134 434 146 HOH HOH . K 7 HOH A 135 435 109 HOH HOH . K 7 HOH A 136 436 112 HOH HOH . K 7 HOH A 137 437 142 HOH HOH . K 7 HOH A 138 438 116 HOH HOH . K 7 HOH A 139 439 130 HOH HOH . K 7 HOH A 140 440 119 HOH HOH . K 7 HOH A 141 441 136 HOH HOH . K 7 HOH A 142 442 106 HOH HOH . K 7 HOH A 143 443 62 HOH HOH . K 7 HOH A 144 444 102 HOH HOH . K 7 HOH A 145 445 111 HOH HOH . K 7 HOH A 146 446 65 HOH HOH . K 7 HOH A 147 447 114 HOH HOH . K 7 HOH A 148 448 115 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 5 _atom_site.Cartn_x 16.829 _atom_site.Cartn_y -25.194 _atom_site.Cartn_z 9.714 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 208 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #