data_7XEA # _model_server_result.job_id 0DdpRf0-UizM1R4Rxxb9bA _model_server_result.datetime_utc '2024-11-27 08:41:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xea # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7XEA # _exptl.entry_id 7XEA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7XEA _cell.length_a 59.898 _cell.length_b 59.898 _cell.length_c 96.77 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XEA _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall 'P 32 2"' _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 44 1_555 A SG CYS 115 A CYS 115 3_655 ? A ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 A SG CYS 68 A CYS 68 1_555 A SG CYS 93 A CYS 93 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc1 A O LYS 19 A LYS 19 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.188 ? metalc ? metalc2 A O ASP 20 A ASP 20 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? metalc ? metalc3 A O ILE 29 A ILE 29 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.854 ? metalc ? metalc4 A OD2 ASP 70 A ASP 70 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc5 A OE2 GLU 128 A GLU 128 1_555 E NA NA . A NA 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 3.066 ? metalc ? metalc6 A OE1 GLU 128 A GLU 128 1_555 F NA NA . A NA 205 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.241 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XEA _atom_sites.fract_transf_matrix[1][1] 0.016695 _atom_sites.fract_transf_matrix[1][2] 0.009639 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019278 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 201 GOL GOL . C 2 GOL A 1 202 202 GOL GOL . D 3 NA A 1 203 1 NA NA . E 3 NA A 1 204 2 NA NA . F 3 NA A 1 205 3 NA NA . G 3 NA A 1 206 4 NA NA . H 4 CL A 1 207 1 CL CL . I 4 CL A 1 208 2 CL CL . J 5 HOH A 1 301 165 HOH HOH . J 5 HOH A 2 302 256 HOH HOH . J 5 HOH A 3 303 232 HOH HOH . J 5 HOH A 4 304 251 HOH HOH . J 5 HOH A 5 305 178 HOH HOH . J 5 HOH A 6 306 162 HOH HOH . J 5 HOH A 7 307 149 HOH HOH . J 5 HOH A 8 308 268 HOH HOH . J 5 HOH A 9 309 138 HOH HOH . J 5 HOH A 10 310 52 HOH HOH . J 5 HOH A 11 311 114 HOH HOH . J 5 HOH A 12 312 166 HOH HOH . J 5 HOH A 13 313 172 HOH HOH . J 5 HOH A 14 314 207 HOH HOH . J 5 HOH A 15 315 119 HOH HOH . J 5 HOH A 16 316 229 HOH HOH . J 5 HOH A 17 317 75 HOH HOH . J 5 HOH A 18 318 32 HOH HOH . J 5 HOH A 19 319 202 HOH HOH . J 5 HOH A 20 320 33 HOH HOH . J 5 HOH A 21 321 117 HOH HOH . J 5 HOH A 22 322 107 HOH HOH . J 5 HOH A 23 323 233 HOH HOH . J 5 HOH A 24 324 187 HOH HOH . J 5 HOH A 25 325 215 HOH HOH . J 5 HOH A 26 326 92 HOH HOH . J 5 HOH A 27 327 74 HOH HOH . J 5 HOH A 28 328 87 HOH HOH . J 5 HOH A 29 329 118 HOH HOH . J 5 HOH A 30 330 226 HOH HOH . J 5 HOH A 31 331 53 HOH HOH . J 5 HOH A 32 332 84 HOH HOH . J 5 HOH A 33 333 19 HOH HOH . J 5 HOH A 34 334 153 HOH HOH . J 5 HOH A 35 335 43 HOH HOH . J 5 HOH A 36 336 44 HOH HOH . J 5 HOH A 37 337 27 HOH HOH . J 5 HOH A 38 338 18 HOH HOH . J 5 HOH A 39 339 50 HOH HOH . J 5 HOH A 40 340 29 HOH HOH . J 5 HOH A 41 341 158 HOH HOH . J 5 HOH A 42 342 31 HOH HOH . J 5 HOH A 43 343 129 HOH HOH . J 5 HOH A 44 344 81 HOH HOH . J 5 HOH A 45 345 96 HOH HOH . J 5 HOH A 46 346 22 HOH HOH . J 5 HOH A 47 347 55 HOH HOH . J 5 HOH A 48 348 94 HOH HOH . J 5 HOH A 49 349 7 HOH HOH . J 5 HOH A 50 350 243 HOH HOH . J 5 HOH A 51 351 224 HOH HOH . J 5 HOH A 52 352 77 HOH HOH . J 5 HOH A 53 353 28 HOH HOH . J 5 HOH A 54 354 2 HOH HOH . J 5 HOH A 55 355 4 HOH HOH . J 5 HOH A 56 356 115 HOH HOH . J 5 HOH A 57 357 46 HOH HOH . J 5 HOH A 58 358 237 HOH HOH . J 5 HOH A 59 359 214 HOH HOH . J 5 HOH A 60 360 245 HOH HOH . J 5 HOH A 61 361 72 HOH HOH . J 5 HOH A 62 362 110 HOH HOH . J 5 HOH A 63 363 57 HOH HOH . J 5 HOH A 64 364 67 HOH HOH . J 5 HOH A 65 365 147 HOH HOH . J 5 HOH A 66 366 246 HOH HOH . J 5 HOH A 67 367 64 HOH HOH . J 5 HOH A 68 368 208 HOH HOH . J 5 HOH A 69 369 16 HOH HOH . J 5 HOH A 70 370 12 HOH HOH . J 5 HOH A 71 371 108 HOH HOH . J 5 HOH A 72 372 144 HOH HOH . J 5 HOH A 73 373 90 HOH HOH . J 5 HOH A 74 374 140 HOH HOH . J 5 HOH A 75 375 217 HOH HOH . J 5 HOH A 76 376 260 HOH HOH . J 5 HOH A 77 377 8 HOH HOH . J 5 HOH A 78 378 5 HOH HOH . J 5 HOH A 79 379 39 HOH HOH . J 5 HOH A 80 380 41 HOH HOH . J 5 HOH A 81 381 203 HOH HOH . J 5 HOH A 82 382 249 HOH HOH . J 5 HOH A 83 383 112 HOH HOH . J 5 HOH A 84 384 131 HOH HOH . J 5 HOH A 85 385 51 HOH HOH . J 5 HOH A 86 386 66 HOH HOH . J 5 HOH A 87 387 65 HOH HOH . J 5 HOH A 88 388 21 HOH HOH . J 5 HOH A 89 389 248 HOH HOH . J 5 HOH A 90 390 124 HOH HOH . J 5 HOH A 91 391 6 HOH HOH . J 5 HOH A 92 392 14 HOH HOH . J 5 HOH A 93 393 109 HOH HOH . J 5 HOH A 94 394 42 HOH HOH . J 5 HOH A 95 395 218 HOH HOH . J 5 HOH A 96 396 240 HOH HOH . J 5 HOH A 97 397 3 HOH HOH . J 5 HOH A 98 398 136 HOH HOH . J 5 HOH A 99 399 206 HOH HOH . J 5 HOH A 100 400 11 HOH HOH . J 5 HOH A 101 401 37 HOH HOH . J 5 HOH A 102 402 185 HOH HOH . J 5 HOH A 103 403 100 HOH HOH . J 5 HOH A 104 404 45 HOH HOH . J 5 HOH A 105 405 180 HOH HOH . J 5 HOH A 106 406 79 HOH HOH . J 5 HOH A 107 407 128 HOH HOH . J 5 HOH A 108 408 141 HOH HOH . J 5 HOH A 109 409 35 HOH HOH . J 5 HOH A 110 410 182 HOH HOH . J 5 HOH A 111 411 223 HOH HOH . J 5 HOH A 112 412 116 HOH HOH . J 5 HOH A 113 413 15 HOH HOH . J 5 HOH A 114 414 225 HOH HOH . J 5 HOH A 115 415 26 HOH HOH . J 5 HOH A 116 416 83 HOH HOH . J 5 HOH A 117 417 30 HOH HOH . J 5 HOH A 118 418 23 HOH HOH . J 5 HOH A 119 419 150 HOH HOH . J 5 HOH A 120 420 113 HOH HOH . J 5 HOH A 121 421 103 HOH HOH . J 5 HOH A 122 422 126 HOH HOH . J 5 HOH A 123 423 122 HOH HOH . J 5 HOH A 124 424 9 HOH HOH . J 5 HOH A 125 425 48 HOH HOH . J 5 HOH A 126 426 95 HOH HOH . J 5 HOH A 127 427 25 HOH HOH . J 5 HOH A 128 428 85 HOH HOH . J 5 HOH A 129 429 58 HOH HOH . J 5 HOH A 130 430 143 HOH HOH . J 5 HOH A 131 431 160 HOH HOH . J 5 HOH A 132 432 63 HOH HOH . J 5 HOH A 133 433 80 HOH HOH . J 5 HOH A 134 434 236 HOH HOH . J 5 HOH A 135 435 13 HOH HOH . J 5 HOH A 136 436 137 HOH HOH . J 5 HOH A 137 437 86 HOH HOH . J 5 HOH A 138 438 105 HOH HOH . J 5 HOH A 139 439 1 HOH HOH . J 5 HOH A 140 440 132 HOH HOH . J 5 HOH A 141 441 78 HOH HOH . J 5 HOH A 142 442 154 HOH HOH . J 5 HOH A 143 443 91 HOH HOH . J 5 HOH A 144 444 134 HOH HOH . J 5 HOH A 145 445 216 HOH HOH . J 5 HOH A 146 446 101 HOH HOH . J 5 HOH A 147 447 97 HOH HOH . J 5 HOH A 148 448 56 HOH HOH . J 5 HOH A 149 449 168 HOH HOH . J 5 HOH A 150 450 24 HOH HOH . J 5 HOH A 151 451 69 HOH HOH . J 5 HOH A 152 452 120 HOH HOH . J 5 HOH A 153 453 99 HOH HOH . J 5 HOH A 154 454 93 HOH HOH . J 5 HOH A 155 455 102 HOH HOH . J 5 HOH A 156 456 60 HOH HOH . J 5 HOH A 157 457 38 HOH HOH . J 5 HOH A 158 458 125 HOH HOH . J 5 HOH A 159 459 40 HOH HOH . J 5 HOH A 160 460 10 HOH HOH . J 5 HOH A 161 461 197 HOH HOH . J 5 HOH A 162 462 61 HOH HOH . J 5 HOH A 163 463 142 HOH HOH . J 5 HOH A 164 464 167 HOH HOH . J 5 HOH A 165 465 17 HOH HOH . J 5 HOH A 166 466 104 HOH HOH . J 5 HOH A 167 467 177 HOH HOH . J 5 HOH A 168 468 130 HOH HOH . J 5 HOH A 169 469 89 HOH HOH . J 5 HOH A 170 470 133 HOH HOH . J 5 HOH A 171 471 127 HOH HOH . J 5 HOH A 172 472 152 HOH HOH . J 5 HOH A 173 473 98 HOH HOH . J 5 HOH A 174 474 106 HOH HOH . J 5 HOH A 175 475 266 HOH HOH . J 5 HOH A 176 476 73 HOH HOH . J 5 HOH A 177 477 227 HOH HOH . J 5 HOH A 178 478 151 HOH HOH . J 5 HOH A 179 479 190 HOH HOH . J 5 HOH A 180 480 123 HOH HOH . J 5 HOH A 181 481 195 HOH HOH . J 5 HOH A 182 482 121 HOH HOH . J 5 HOH A 183 483 244 HOH HOH . J 5 HOH A 184 484 253 HOH HOH . J 5 HOH A 185 485 82 HOH HOH . J 5 HOH A 186 486 173 HOH HOH . J 5 HOH A 187 487 258 HOH HOH . J 5 HOH A 188 488 220 HOH HOH . J 5 HOH A 189 489 188 HOH HOH . J 5 HOH A 190 490 192 HOH HOH . J 5 HOH A 191 491 159 HOH HOH . J 5 HOH A 192 492 139 HOH HOH . J 5 HOH A 193 493 222 HOH HOH . J 5 HOH A 194 494 238 HOH HOH . J 5 HOH A 195 495 70 HOH HOH . J 5 HOH A 196 496 76 HOH HOH . J 5 HOH A 197 497 204 HOH HOH . J 5 HOH A 198 498 157 HOH HOH . J 5 HOH A 199 499 205 HOH HOH . J 5 HOH A 200 500 257 HOH HOH . J 5 HOH A 201 501 184 HOH HOH . J 5 HOH A 202 502 228 HOH HOH . J 5 HOH A 203 503 234 HOH HOH . J 5 HOH A 204 504 148 HOH HOH . J 5 HOH A 205 505 265 HOH HOH . J 5 HOH A 206 506 47 HOH HOH . J 5 HOH A 207 507 270 HOH HOH . J 5 HOH A 208 508 231 HOH HOH . J 5 HOH A 209 509 189 HOH HOH . J 5 HOH A 210 510 254 HOH HOH . J 5 HOH A 211 511 252 HOH HOH . J 5 HOH A 212 512 62 HOH HOH . J 5 HOH A 213 513 170 HOH HOH . J 5 HOH A 214 514 259 HOH HOH . J 5 HOH A 215 515 54 HOH HOH . J 5 HOH A 216 516 230 HOH HOH . J 5 HOH A 217 517 20 HOH HOH . J 5 HOH A 218 518 247 HOH HOH . J 5 HOH A 219 519 239 HOH HOH . J 5 HOH A 220 520 219 HOH HOH . J 5 HOH A 221 521 169 HOH HOH . J 5 HOH A 222 522 235 HOH HOH . J 5 HOH A 223 523 135 HOH HOH . J 5 HOH A 224 524 199 HOH HOH . J 5 HOH A 225 525 201 HOH HOH . J 5 HOH A 226 526 163 HOH HOH . J 5 HOH A 227 527 34 HOH HOH . J 5 HOH A 228 528 213 HOH HOH . J 5 HOH A 229 529 146 HOH HOH . J 5 HOH A 230 530 145 HOH HOH . J 5 HOH A 231 531 269 HOH HOH . J 5 HOH A 232 532 88 HOH HOH . J 5 HOH A 233 533 209 HOH HOH . J 5 HOH A 234 534 49 HOH HOH . J 5 HOH A 235 535 179 HOH HOH . J 5 HOH A 236 536 186 HOH HOH . J 5 HOH A 237 537 181 HOH HOH . J 5 HOH A 238 538 221 HOH HOH . J 5 HOH A 239 539 196 HOH HOH . J 5 HOH A 240 540 71 HOH HOH . J 5 HOH A 241 541 175 HOH HOH . J 5 HOH A 242 542 261 HOH HOH . J 5 HOH A 243 543 36 HOH HOH . J 5 HOH A 244 544 211 HOH HOH . J 5 HOH A 245 545 156 HOH HOH . J 5 HOH A 246 546 263 HOH HOH . J 5 HOH A 247 547 250 HOH HOH . J 5 HOH A 248 548 200 HOH HOH . J 5 HOH A 249 549 111 HOH HOH . J 5 HOH A 250 550 267 HOH HOH . J 5 HOH A 251 551 68 HOH HOH . J 5 HOH A 252 552 255 HOH HOH . J 5 HOH A 253 553 183 HOH HOH . J 5 HOH A 254 554 193 HOH HOH . J 5 HOH A 255 555 155 HOH HOH . J 5 HOH A 256 556 242 HOH HOH . J 5 HOH A 257 557 174 HOH HOH . J 5 HOH A 258 558 161 HOH HOH . J 5 HOH A 259 559 210 HOH HOH . J 5 HOH A 260 560 59 HOH HOH . J 5 HOH A 261 561 264 HOH HOH . J 5 HOH A 262 562 212 HOH HOH . J 5 HOH A 263 563 164 HOH HOH . J 5 HOH A 264 564 176 HOH HOH . J 5 HOH A 265 565 194 HOH HOH . J 5 HOH A 266 566 262 HOH HOH . J 5 HOH A 267 567 198 HOH HOH . J 5 HOH A 268 568 241 HOH HOH . J 5 HOH A 269 569 191 HOH HOH . J 5 HOH A 270 570 171 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 30.174 _atom_site.Cartn_y -0.508 _atom_site.Cartn_z -11.526 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #