data_7XEV # _model_server_result.job_id iMQjBTPyILyHvJ2NZFEzIQ _model_server_result.datetime_utc '2024-11-21 14:27:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xev # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1001}' # _entry.id 7XEV # _exptl.entry_id 7XEV _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 225.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-aminoethyl diphenylborinate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XEV _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XEV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C14 H16 B N O' _chem_comp.formula_weight 225.094 _chem_comp.id FZ4 _chem_comp.mon_nstd_flag . _chem_comp.name '2-aminoethyl diphenylborinate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 FZ4 sing 83 n n C15 O14 FZ4 sing 84 n n C16 N17 FZ4 sing 85 n n C06 C07 FZ4 doub 86 n y C06 C05 FZ4 sing 87 n y O14 B01 FZ4 sing 88 n n C07 C02 FZ4 sing 89 n y C05 C04 FZ4 doub 90 n y C02 B01 FZ4 sing 91 n n C02 C03 FZ4 doub 92 n y C04 C03 FZ4 sing 93 n y B01 C08 FZ4 sing 94 n n C08 C13 FZ4 doub 95 n y C08 C09 FZ4 sing 96 n y C13 C12 FZ4 sing 97 n y C09 C10 FZ4 doub 98 n y C12 C11 FZ4 doub 99 n y C10 C11 FZ4 sing 100 n y C03 H1 FZ4 sing 101 n n C04 H2 FZ4 sing 102 n n C05 H3 FZ4 sing 103 n n C06 H4 FZ4 sing 104 n n C07 H5 FZ4 sing 105 n n C09 H6 FZ4 sing 106 n n C10 H7 FZ4 sing 107 n n C11 H8 FZ4 sing 108 n n C12 H9 FZ4 sing 109 n n C13 H10 FZ4 sing 110 n n C15 H11 FZ4 sing 111 n n C15 H12 FZ4 sing 112 n n C16 H13 FZ4 sing 113 n n C16 H14 FZ4 sing 114 n n N17 H15 FZ4 sing 115 n n N17 H16 FZ4 sing 116 n n # _atom_sites.entry_id 7XEV _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FZ4 A 1 1001 1001 FZ4 LIG . F 2 FZ4 B 1 1001 1001 FZ4 LIG . G 2 FZ4 C 1 1001 1001 FZ4 LIG . H 2 FZ4 D 1 1001 1001 FZ4 LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B01 FZ4 . . . F 2 99.033 85.345 122.203 1 58.19 ? B01 FZ4 1001 B 1 HETATM 2 C C02 FZ4 . . . F 2 98.634 86.665 121.448 1 58.19 ? C02 FZ4 1001 B 1 HETATM 3 C C03 FZ4 . . . F 2 97.583 87.407 121.922 1 58.19 ? C03 FZ4 1001 B 1 HETATM 4 C C04 FZ4 . . . F 2 96.549 87.761 121.094 1 58.19 ? C04 FZ4 1001 B 1 HETATM 5 C C05 FZ4 . . . F 2 96.749 87.71 119.726 1 58.19 ? C05 FZ4 1001 B 1 HETATM 6 C C06 FZ4 . . . F 2 98.001 87.328 119.232 1 58.19 ? C06 FZ4 1001 B 1 HETATM 7 C C07 FZ4 . . . F 2 98.957 86.8 120.108 1 58.19 ? C07 FZ4 1001 B 1 HETATM 8 C C08 FZ4 . . . F 2 100.481 85.185 122.796 1 58.19 ? C08 FZ4 1001 B 1 HETATM 9 C C09 FZ4 . . . F 2 100.644 85.159 124.17 1 58.19 ? C09 FZ4 1001 B 1 HETATM 10 C C10 FZ4 . . . F 2 101.4 84.137 124.732 1 58.19 ? C10 FZ4 1001 B 1 HETATM 11 C C11 FZ4 . . . F 2 102.278 83.428 123.921 1 58.19 ? C11 FZ4 1001 B 1 HETATM 12 C C12 FZ4 . . . F 2 102.384 83.757 122.579 1 58.19 ? C12 FZ4 1001 B 1 HETATM 13 C C13 FZ4 . . . F 2 101.476 84.633 122.015 1 58.19 ? C13 FZ4 1001 B 1 HETATM 14 C C15 FZ4 . . . F 2 97.059 84.069 122.758 1 58.19 ? C15 FZ4 1001 B 1 HETATM 15 C C16 FZ4 . . . F 2 97.36 83.748 124.22 1 58.19 ? C16 FZ4 1001 B 1 HETATM 16 N N17 FZ4 . . . F 2 98.532 82.897 124.306 1 58.19 ? N17 FZ4 1001 B 1 HETATM 17 O O14 FZ4 . . . F 2 98.258 84.259 122.066 1 58.19 ? O14 FZ4 1001 B 1 HETATM 18 H H1 FZ4 . . . F 2 97.482 87.56 122.99 1 58.19 ? H1 FZ4 1001 B 1 HETATM 19 H H2 FZ4 . . . F 2 95.543 87.824 121.489 1 58.19 ? H2 FZ4 1001 B 1 HETATM 20 H H3 FZ4 . . . F 2 95.902 87.775 119.055 1 58.19 ? H3 FZ4 1001 B 1 HETATM 21 H H4 FZ4 . . . F 2 98.176 87.305 118.164 1 58.19 ? H4 FZ4 1001 B 1 HETATM 22 H H5 FZ4 . . . F 2 99.844 86.319 119.714 1 58.19 ? H5 FZ4 1001 B 1 HETATM 23 H H6 FZ4 . . . F 2 100.009 85.769 124.8 1 58.19 ? H6 FZ4 1001 B 1 HETATM 24 H H7 FZ4 . . . F 2 101.123 83.737 125.699 1 58.19 ? H7 FZ4 1001 B 1 HETATM 25 H H8 FZ4 . . . F 2 102.755 82.531 124.297 1 58.19 ? H8 FZ4 1001 B 1 HETATM 26 H H9 FZ4 . . . F 2 103.114 83.257 121.955 1 58.19 ? H9 FZ4 1001 B 1 HETATM 27 H H10 FZ4 . . . F 2 101.667 85.037 121.029 1 58.19 ? H10 FZ4 1001 B 1 HETATM 28 H H11 FZ4 . . . F 2 96.463 84.974 122.705 1 58.19 ? H11 FZ4 1001 B 1 HETATM 29 H H12 FZ4 . . . F 2 96.507 83.25 122.311 1 58.19 ? H12 FZ4 1001 B 1 HETATM 30 H H13 FZ4 . . . F 2 96.51 83.235 124.658 1 58.19 ? H13 FZ4 1001 B 1 HETATM 31 H H14 FZ4 . . . F 2 97.544 84.671 124.76 1 58.19 ? H14 FZ4 1001 B 1 HETATM 32 H H15 FZ4 . . . F 2 98.949 82.809 123.399 1 58.19 ? H15 FZ4 1001 B 1 HETATM 33 H H16 FZ4 . . . F 2 98.262 81.991 124.64 1 58.19 ? H16 FZ4 1001 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 33 #