data_7XF0
#
_model_server_result.job_id            5dIjy859C4dtgXGPz8CenA 
_model_server_result.datetime_utc      '2024-10-10 03:29:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xf0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":701}' 
#
_entry.id    7XF0 
#
_exptl.entry_id    7XF0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.84 
_cell.angle_gamma         90 
_cell.entry_id            7XF0 
_cell.length_a            135.546 
_cell.length_b            72.095 
_cell.length_c            224.23 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XF0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D 1 1 
B,E 2 1 
C,F 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7XF0 
_atom_sites.fract_transf_matrix[1][1]    0.007378 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000108 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013871 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00446 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ATP C 1 701 701 ATP ATP . 
E 2 ATP A 1 701 701 ATP ATP . 
F 2 ATP B 1 701 701 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . D 2 31.956 -24.684 41.802 1 79.05 ? PG ATP 701 C 1 
HETATM 2 O O1G ATP . . . D 2 31.353 -25.833 42.539 1 77.67 ? O1G ATP 701 C 1 
HETATM 3 O O2G ATP . . . D 2 31.98 -24.872 40.279 1 71.34 ? O2G ATP 701 C 1 
HETATM 4 O O3G ATP . . . D 2 31.303 -23.336 42.129 1 71.11 ? O3G ATP 701 C 1 
HETATM 5 P PB ATP . . . D 2 34.786 -25.372 42.571 1 58.99 ? PB ATP 701 C 1 
HETATM 6 O O1B ATP . . . D 2 34.646 -26.777 42.134 1 55.37 ? O1B ATP 701 C 1 
HETATM 7 O O2B ATP . . . D 2 36.008 -24.627 42.035 1 53.95 ? O2B ATP 701 C 1 
HETATM 8 O O3B ATP . . . D 2 33.498 -24.495 42.211 1 67.24 ? O3B ATP 701 C 1 
HETATM 9 P PA ATP . . . D 2 33.798 -24.95 45.329 1 69.45 ? PA ATP 701 C 1 
HETATM 10 O O1A ATP . . . D 2 32.864 -26.077 45.523 1 69.32 ? O1A ATP 701 C 1 
HETATM 11 O O2A ATP . . . D 2 33.143 -23.602 45.024 1 60.58 ? O2A ATP 701 C 1 
HETATM 12 O O3A ATP . . . D 2 34.832 -25.247 44.157 1 71.03 ? O3A ATP 701 C 1 
HETATM 13 O O5' ATP . . . D 2 34.742 -24.764 46.581 1 67.28 ? O5' ATP 701 C 1 
HETATM 14 C C5' ATP . . . D 2 35.494 -25.869 47.125 1 66.15 ? C5' ATP 701 C 1 
HETATM 15 C C4' ATP . . . D 2 35.613 -25.689 48.618 1 76.73 ? C4' ATP 701 C 1 
HETATM 16 O O4' ATP . . . D 2 36.828 -24.968 48.927 1 79.05 ? O4' ATP 701 C 1 
HETATM 17 C C3' ATP . . . D 2 34.469 -24.917 49.279 1 75.46 ? C3' ATP 701 C 1 
HETATM 18 O O3' ATP . . . D 2 34.098 -25.514 50.516 1 78.84 ? O3' ATP 701 C 1 
HETATM 19 C C2' ATP . . . D 2 35.066 -23.52 49.477 1 76.87 ? C2' ATP 701 C 1 
HETATM 20 O O2' ATP . . . D 2 34.486 -22.845 50.588 1 76.07 ? O2' ATP 701 C 1 
HETATM 21 C C1' ATP . . . D 2 36.527 -23.863 49.755 1 79.17 ? C1' ATP 701 C 1 
HETATM 22 N N9 ATP . . . D 2 37.465 -22.787 49.452 1 78.4 ? N9 ATP 701 C 1 
HETATM 23 C C8 ATP . . . D 2 37.332 -21.811 48.498 1 72.44 ? C8 ATP 701 C 1 
HETATM 24 N N7 ATP . . . D 2 38.336 -20.969 48.45 1 72.98 ? N7 ATP 701 C 1 
HETATM 25 C C5 ATP . . . D 2 39.191 -21.422 49.444 1 77.37 ? C5 ATP 701 C 1 
HETATM 26 C C6 ATP . . . D 2 40.44 -20.963 49.906 1 75.82 ? C6 ATP 701 C 1 
HETATM 27 N N6 ATP . . . D 2 41.074 -19.898 49.405 1 74.26 ? N6 ATP 701 C 1 
HETATM 28 N N1 ATP . . . D 2 41.027 -21.645 50.915 1 75.9 ? N1 ATP 701 C 1 
HETATM 29 C C2 ATP . . . D 2 40.4 -22.71 51.421 1 76.78 ? C2 ATP 701 C 1 
HETATM 30 N N3 ATP . . . D 2 39.224 -23.234 51.068 1 75.84 ? N3 ATP 701 C 1 
HETATM 31 C C4 ATP . . . D 2 38.666 -22.54 50.071 1 78.89 ? C4 ATP 701 C 1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#