data_7XH6 # _model_server_result.job_id 6CXzrN4mfN-0T2rg_FF-OQ _model_server_result.datetime_utc '2024-12-18 17:18:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xh6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1202}' # _entry.id 7XH6 # _exptl.entry_id 7XH6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.13 _cell.angle_gamma 90 _cell.entry_id 7XH6 _cell.length_a 48.457 _cell.length_b 33.713 _cell.length_c 78.342 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XH6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7XH6 _atom_sites.fract_transf_matrix[1][1] 0.020637 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001853 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012816 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 1201 1201 GOL GOL . D 3 DMS A 1 1202 1202 DMS DMS . E 4 JHL A 1 1203 1 JHL JHL . F 4 JHL B 1 1201 2 JHL JHL . G 5 HOH A 1 1301 76 HOH HOH . G 5 HOH A 2 1302 40 HOH HOH . G 5 HOH A 3 1303 6 HOH HOH . G 5 HOH A 4 1304 80 HOH HOH . G 5 HOH A 5 1305 42 HOH HOH . G 5 HOH A 6 1306 45 HOH HOH . G 5 HOH A 7 1307 17 HOH HOH . G 5 HOH A 8 1308 86 HOH HOH . G 5 HOH A 9 1309 35 HOH HOH . G 5 HOH A 10 1310 43 HOH HOH . G 5 HOH A 11 1311 9 HOH HOH . G 5 HOH A 12 1312 68 HOH HOH . G 5 HOH A 13 1313 7 HOH HOH . G 5 HOH A 14 1314 62 HOH HOH . G 5 HOH A 15 1315 87 HOH HOH . G 5 HOH A 16 1316 66 HOH HOH . G 5 HOH A 17 1317 44 HOH HOH . G 5 HOH A 18 1318 53 HOH HOH . G 5 HOH A 19 1319 12 HOH HOH . G 5 HOH A 20 1320 70 HOH HOH . G 5 HOH A 21 1321 31 HOH HOH . G 5 HOH A 22 1322 13 HOH HOH . G 5 HOH A 23 1323 19 HOH HOH . G 5 HOH A 24 1324 16 HOH HOH . G 5 HOH A 25 1325 29 HOH HOH . G 5 HOH A 26 1326 83 HOH HOH . G 5 HOH A 27 1327 14 HOH HOH . G 5 HOH A 28 1328 48 HOH HOH . G 5 HOH A 29 1329 81 HOH HOH . G 5 HOH A 30 1330 24 HOH HOH . G 5 HOH A 31 1331 23 HOH HOH . G 5 HOH A 32 1332 36 HOH HOH . G 5 HOH A 33 1333 67 HOH HOH . G 5 HOH A 34 1334 3 HOH HOH . G 5 HOH A 35 1335 11 HOH HOH . G 5 HOH A 36 1336 64 HOH HOH . G 5 HOH A 37 1337 8 HOH HOH . G 5 HOH A 38 1338 33 HOH HOH . G 5 HOH A 39 1339 84 HOH HOH . G 5 HOH A 40 1340 10 HOH HOH . G 5 HOH A 41 1341 4 HOH HOH . G 5 HOH A 42 1342 73 HOH HOH . G 5 HOH A 43 1343 37 HOH HOH . G 5 HOH A 44 1344 55 HOH HOH . G 5 HOH A 45 1345 82 HOH HOH . G 5 HOH A 46 1346 69 HOH HOH . G 5 HOH A 47 1347 32 HOH HOH . G 5 HOH A 48 1348 21 HOH HOH . G 5 HOH A 49 1349 50 HOH HOH . G 5 HOH A 50 1350 27 HOH HOH . G 5 HOH A 51 1351 20 HOH HOH . G 5 HOH A 52 1352 41 HOH HOH . G 5 HOH A 53 1353 63 HOH HOH . G 5 HOH A 54 1354 51 HOH HOH . G 5 HOH A 55 1355 77 HOH HOH . G 5 HOH A 56 1356 71 HOH HOH . G 5 HOH A 57 1357 72 HOH HOH . G 5 HOH A 58 1358 65 HOH HOH . G 5 HOH A 59 1359 54 HOH HOH . G 5 HOH A 60 1360 38 HOH HOH . G 5 HOH A 61 1361 52 HOH HOH . G 5 HOH A 62 1362 75 HOH HOH . G 5 HOH A 63 1363 88 HOH HOH . H 5 HOH B 1 1301 25 HOH HOH . H 5 HOH B 2 1302 18 HOH HOH . H 5 HOH B 3 1303 30 HOH HOH . H 5 HOH B 4 1304 39 HOH HOH . H 5 HOH B 5 1305 59 HOH HOH . H 5 HOH B 6 1306 74 HOH HOH . H 5 HOH B 7 1307 61 HOH HOH . H 5 HOH B 8 1308 15 HOH HOH . H 5 HOH B 9 1309 78 HOH HOH . H 5 HOH B 10 1310 49 HOH HOH . H 5 HOH B 11 1311 46 HOH HOH . H 5 HOH B 12 1312 60 HOH HOH . H 5 HOH B 13 1313 22 HOH HOH . H 5 HOH B 14 1314 26 HOH HOH . H 5 HOH B 15 1315 57 HOH HOH . H 5 HOH B 16 1316 28 HOH HOH . H 5 HOH B 17 1317 58 HOH HOH . H 5 HOH B 18 1318 56 HOH HOH . H 5 HOH B 19 1319 47 HOH HOH . H 5 HOH B 20 1320 85 HOH HOH . H 5 HOH B 21 1321 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 18.462 11.151 2.368 1 78.42 ? S DMS 1202 A 1 HETATM 2 O O DMS . . . D 3 18.887 9.889 3.074 1 53.61 ? O DMS 1202 A 1 HETATM 3 C C1 DMS . . . D 3 18.689 10.951 0.687 1 66.19 ? C1 DMS 1202 A 1 HETATM 4 C C2 DMS . . . D 3 16.779 11.515 2.473 1 68.99 ? C2 DMS 1202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 427 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #