data_7XI0
#
_model_server_result.job_id            QSTmYLaMggS4AU5QrszNnw 
_model_server_result.datetime_utc      '2025-01-25 11:32:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xi0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1201}' 
#
_entry.id    7XI0 
#
_exptl.entry_id    7XI0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              598.113 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (6S)-1-(3-chloranyl-4-methoxy-phenyl)-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3R)-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]piperidin-2-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.65 
_cell.angle_gamma         90 
_cell.entry_id            7XI0 
_cell.length_a            48.54 
_cell.length_b            33.84 
_cell.length_c            78.699 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XI0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C29 H32 Cl N5 O5 S' 
_chem_comp.formula_weight    598.113 
_chem_comp.id                EL0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (6S)-1-(3-chloranyl-4-methoxy-phenyl)-6-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(3R)-1-methylsulfonylpyrrolidin-3-yl]benzimidazol-2-yl]piperidin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAX CAW EL0 sing 83 n n 
CAX CAY EL0 sing 84 n n 
CAW CAR EL0 sing 85 n n 
CAY CAZ EL0 sing 86 n n 
CBE SBB EL0 sing 87 n n 
CAZ OBF EL0 doub 88 n n 
CAZ NBA EL0 sing 89 n n 
CAR NBA EL0 sing 90 n n 
CAR CAO EL0 sing 91 n n 
OBD SBB EL0 doub 92 n n 
CAV NAU EL0 sing 93 n n 
CAV CAQ EL0 sing 94 n n 
SBB NAU EL0 sing 95 n n 
SBB OBC EL0 doub 96 n n 
NBA CBG EL0 sing 97 n n 
NAU CAT EL0 sing 98 n n 
CAQ NAN EL0 sing 99 n n 
CAQ CAS EL0 sing 100 n n 
CAO NAN EL0 sing 101 n y 
CAO NAP EL0 doub 102 n y 
NAN CAK EL0 sing 103 n y 
CBH CBG EL0 doub 104 n y 
CBH CBI EL0 sing 105 n y 
CBG CBL EL0 sing 106 n y 
NAP CAL EL0 sing 107 n y 
CAT CAS EL0 sing 108 n n 
CAK CAL EL0 doub 109 n y 
CAK CAJ EL0 sing 110 n y 
CAL CAM EL0 sing 111 n y 
CBI CBJ EL0 doub 112 n y 
CBL CBK EL0 doub 113 n y 
CAJ CAI EL0 doub 114 n y 
CAM CAH EL0 doub 115 n y 
CAF CAE EL0 sing 116 n n 
CBJ CBK EL0 sing 117 n y 
CBJ OBN EL0 sing 118 n n 
CBK CL EL0 sing 119 n n 
CAI CAH EL0 sing 120 n y 
CAH CAA EL0 sing 121 n n 
CAE CAA EL0 doub 122 n y 
CAE OAD EL0 sing 123 n y 
CBO OBN EL0 sing 124 n n 
CAA CAB EL0 sing 125 n y 
OAD NAC EL0 sing 126 n y 
CAB NAC EL0 doub 127 n y 
CAB CAG EL0 sing 128 n n 
CBO H1 EL0 sing 129 n n 
CBO H2 EL0 sing 130 n n 
CBO H3 EL0 sing 131 n n 
CBL H4 EL0 sing 132 n n 
CBI H5 EL0 sing 133 n n 
CBH H6 EL0 sing 134 n n 
CAY H7 EL0 sing 135 n n 
CAY H8 EL0 sing 136 n n 
CAX H9 EL0 sing 137 n n 
CAX H10 EL0 sing 138 n n 
CAW H11 EL0 sing 139 n n 
CAW H12 EL0 sing 140 n n 
CAR H13 EL0 sing 141 n n 
CAM H14 EL0 sing 142 n n 
CAF H15 EL0 sing 143 n n 
CAF H16 EL0 sing 144 n n 
CAF H17 EL0 sing 145 n n 
CAG H18 EL0 sing 146 n n 
CAG H19 EL0 sing 147 n n 
CAG H20 EL0 sing 148 n n 
CAI H21 EL0 sing 149 n n 
CAJ H22 EL0 sing 150 n n 
CAQ H23 EL0 sing 151 n n 
CAV H24 EL0 sing 152 n n 
CAV H25 EL0 sing 153 n n 
CAS H26 EL0 sing 154 n n 
CAS H27 EL0 sing 155 n n 
CAT H28 EL0 sing 156 n n 
CAT H29 EL0 sing 157 n n 
CBE H30 EL0 sing 158 n n 
CBE H31 EL0 sing 159 n n 
CBE H32 EL0 sing 160 n n 
#
_atom_sites.entry_id                     7XI0 
_atom_sites.fract_transf_matrix[1][1]    0.020602 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001676 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.029551 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012749 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EL0 A 1 1201 1 EL0 JHI . 
D 3 GOL A 1 1202 1 GOL GOL . 
E 2 EL0 B 1 1201 2 EL0 JHI . 
F 4 HOH A 1 1301 134 HOH HOH . 
F 4 HOH A 2 1302 115 HOH HOH . 
F 4 HOH A 3 1303 93 HOH HOH . 
F 4 HOH A 4 1304 97 HOH HOH . 
F 4 HOH A 5 1305 44 HOH HOH . 
F 4 HOH A 6 1306 14 HOH HOH . 
F 4 HOH A 7 1307 25 HOH HOH . 
F 4 HOH A 8 1308 18 HOH HOH . 
F 4 HOH A 9 1309 49 HOH HOH . 
F 4 HOH A 10 1310 23 HOH HOH . 
F 4 HOH A 11 1311 101 HOH HOH . 
F 4 HOH A 12 1312 87 HOH HOH . 
F 4 HOH A 13 1313 94 HOH HOH . 
F 4 HOH A 14 1314 28 HOH HOH . 
F 4 HOH A 15 1315 11 HOH HOH . 
F 4 HOH A 16 1316 75 HOH HOH . 
F 4 HOH A 17 1317 68 HOH HOH . 
F 4 HOH A 18 1318 63 HOH HOH . 
F 4 HOH A 19 1319 15 HOH HOH . 
F 4 HOH A 20 1320 135 HOH HOH . 
F 4 HOH A 21 1321 16 HOH HOH . 
F 4 HOH A 22 1322 80 HOH HOH . 
F 4 HOH A 23 1323 133 HOH HOH . 
F 4 HOH A 24 1324 37 HOH HOH . 
F 4 HOH A 25 1325 117 HOH HOH . 
F 4 HOH A 26 1326 89 HOH HOH . 
F 4 HOH A 27 1327 73 HOH HOH . 
F 4 HOH A 28 1328 129 HOH HOH . 
F 4 HOH A 29 1329 77 HOH HOH . 
F 4 HOH A 30 1330 31 HOH HOH . 
F 4 HOH A 31 1331 8 HOH HOH . 
F 4 HOH A 32 1332 50 HOH HOH . 
F 4 HOH A 33 1333 41 HOH HOH . 
F 4 HOH A 34 1334 69 HOH HOH . 
F 4 HOH A 35 1335 4 HOH HOH . 
F 4 HOH A 36 1336 34 HOH HOH . 
F 4 HOH A 37 1337 124 HOH HOH . 
F 4 HOH A 38 1338 1 HOH HOH . 
F 4 HOH A 39 1339 3 HOH HOH . 
F 4 HOH A 40 1340 19 HOH HOH . 
F 4 HOH A 41 1341 62 HOH HOH . 
F 4 HOH A 42 1342 84 HOH HOH . 
F 4 HOH A 43 1343 10 HOH HOH . 
F 4 HOH A 44 1344 42 HOH HOH . 
F 4 HOH A 45 1345 9 HOH HOH . 
F 4 HOH A 46 1346 118 HOH HOH . 
F 4 HOH A 47 1347 128 HOH HOH . 
F 4 HOH A 48 1348 7 HOH HOH . 
F 4 HOH A 49 1349 6 HOH HOH . 
F 4 HOH A 50 1350 70 HOH HOH . 
F 4 HOH A 51 1351 81 HOH HOH . 
F 4 HOH A 52 1352 2 HOH HOH . 
F 4 HOH A 53 1353 33 HOH HOH . 
F 4 HOH A 54 1354 45 HOH HOH . 
F 4 HOH A 55 1355 66 HOH HOH . 
F 4 HOH A 56 1356 21 HOH HOH . 
F 4 HOH A 57 1357 30 HOH HOH . 
F 4 HOH A 58 1358 13 HOH HOH . 
F 4 HOH A 59 1359 98 HOH HOH . 
F 4 HOH A 60 1360 17 HOH HOH . 
F 4 HOH A 61 1361 54 HOH HOH . 
F 4 HOH A 62 1362 48 HOH HOH . 
F 4 HOH A 63 1363 24 HOH HOH . 
F 4 HOH A 64 1364 85 HOH HOH . 
F 4 HOH A 65 1365 38 HOH HOH . 
F 4 HOH A 66 1366 91 HOH HOH . 
F 4 HOH A 67 1367 107 HOH HOH . 
F 4 HOH A 68 1368 56 HOH HOH . 
F 4 HOH A 69 1369 65 HOH HOH . 
F 4 HOH A 70 1370 59 HOH HOH . 
F 4 HOH A 71 1371 20 HOH HOH . 
F 4 HOH A 72 1372 39 HOH HOH . 
F 4 HOH A 73 1373 12 HOH HOH . 
F 4 HOH A 74 1374 5 HOH HOH . 
F 4 HOH A 75 1375 79 HOH HOH . 
F 4 HOH A 76 1376 51 HOH HOH . 
F 4 HOH A 77 1377 131 HOH HOH . 
F 4 HOH A 78 1378 55 HOH HOH . 
F 4 HOH A 79 1379 86 HOH HOH . 
F 4 HOH A 80 1380 109 HOH HOH . 
F 4 HOH A 81 1381 108 HOH HOH . 
F 4 HOH A 82 1382 83 HOH HOH . 
F 4 HOH A 83 1383 106 HOH HOH . 
F 4 HOH A 84 1384 72 HOH HOH . 
F 4 HOH A 85 1385 29 HOH HOH . 
F 4 HOH A 86 1386 100 HOH HOH . 
F 4 HOH A 87 1387 74 HOH HOH . 
F 4 HOH A 88 1388 111 HOH HOH . 
F 4 HOH A 89 1389 132 HOH HOH . 
F 4 HOH A 90 1390 61 HOH HOH . 
F 4 HOH A 91 1391 58 HOH HOH . 
F 4 HOH A 92 1392 88 HOH HOH . 
G 4 HOH B 1 1301 71 HOH HOH . 
G 4 HOH B 2 1302 123 HOH HOH . 
G 4 HOH B 3 1303 116 HOH HOH . 
G 4 HOH B 4 1304 126 HOH HOH . 
G 4 HOH B 5 1305 99 HOH HOH . 
G 4 HOH B 6 1306 104 HOH HOH . 
G 4 HOH B 7 1307 92 HOH HOH . 
G 4 HOH B 8 1308 35 HOH HOH . 
G 4 HOH B 9 1309 122 HOH HOH . 
G 4 HOH B 10 1310 90 HOH HOH . 
G 4 HOH B 11 1311 130 HOH HOH . 
G 4 HOH B 12 1312 22 HOH HOH . 
G 4 HOH B 13 1313 46 HOH HOH . 
G 4 HOH B 14 1314 96 HOH HOH . 
G 4 HOH B 15 1315 64 HOH HOH . 
G 4 HOH B 16 1316 52 HOH HOH . 
G 4 HOH B 17 1317 36 HOH HOH . 
G 4 HOH B 18 1318 26 HOH HOH . 
G 4 HOH B 19 1319 32 HOH HOH . 
G 4 HOH B 20 1320 40 HOH HOH . 
G 4 HOH B 21 1321 78 HOH HOH . 
G 4 HOH B 22 1322 43 HOH HOH . 
G 4 HOH B 23 1323 105 HOH HOH . 
G 4 HOH B 24 1324 114 HOH HOH . 
G 4 HOH B 25 1325 67 HOH HOH . 
G 4 HOH B 26 1326 60 HOH HOH . 
G 4 HOH B 27 1327 113 HOH HOH . 
G 4 HOH B 28 1328 57 HOH HOH . 
G 4 HOH B 29 1329 103 HOH HOH . 
G 4 HOH B 30 1330 53 HOH HOH . 
G 4 HOH B 31 1331 76 HOH HOH . 
G 4 HOH B 32 1332 120 HOH HOH . 
G 4 HOH B 33 1333 112 HOH HOH . 
G 4 HOH B 34 1334 47 HOH HOH . 
G 4 HOH B 35 1335 125 HOH HOH . 
G 4 HOH B 36 1336 27 HOH HOH . 
G 4 HOH B 37 1337 102 HOH HOH . 
G 4 HOH B 38 1338 127 HOH HOH . 
G 4 HOH B 39 1339 121 HOH HOH . 
G 4 HOH B 40 1340 82 HOH HOH . 
G 4 HOH B 41 1341 110 HOH HOH . 
G 4 HOH B 42 1342 95 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CBO EL0 . . . C 2 8.324 -8.468 -8.509 1 11.65 ? CBO EL0 1201 A 1 
HETATM 2 O OBN EL0 . . . C 2 7.226 -7.531 -8.484 1 11.31 ? OBN EL0 1201 A 1 
HETATM 3 C CBJ EL0 . . . C 2 6.917 -6.878 -9.611 1 12.52 ? CBJ EL0 1201 A 1 
HETATM 4 C CBK EL0 . . . C 2 5.921 -5.92 -9.459 1 12.89 ? CBK EL0 1201 A 1 
HETATM 5 CL CL EL0 . . . C 2 5.272 -5.59 -7.879 1 14.29 ? CL EL0 1201 A 1 
HETATM 6 C CBL EL0 . . . C 2 5.588 -5.153 -10.574 1 13.56 ? CBL EL0 1201 A 1 
HETATM 7 C CBI EL0 . . . C 2 7.423 -7.173 -10.889 1 13.58 ? CBI EL0 1201 A 1 
HETATM 8 C CBH EL0 . . . C 2 7.078 -6.402 -12.006 1 14.72 ? CBH EL0 1201 A 1 
HETATM 9 C CBG EL0 . . . C 2 6.094 -5.437 -11.864 1 14.93 ? CBG EL0 1201 A 1 
HETATM 10 N NBA EL0 . . . C 2 5.752 -4.664 -12.962 1 16.84 ? NBA EL0 1201 A 1 
HETATM 11 C CAZ EL0 . . . C 2 4.58 -4.9 -13.59 1 17.66 ? CAZ EL0 1201 A 1 
HETATM 12 O OBF EL0 . . . C 2 3.83 -5.73 -13.094 1 18.05 ? OBF EL0 1201 A 1 
HETATM 13 C CAY EL0 . . . C 2 4.18 -4.105 -14.736 1 17.99 ? CAY EL0 1201 A 1 
HETATM 14 C CAX EL0 . . . C 2 5.378 -3.816 -15.521 1 18.39 ? CAX EL0 1201 A 1 
HETATM 15 C CAW EL0 . . . C 2 6.336 -2.83 -14.77 1 16.83 ? CAW EL0 1201 A 1 
HETATM 16 C CAR EL0 . . . C 2 6.797 -3.678 -13.511 1 15.59 ? CAR EL0 1201 A 1 
HETATM 17 C CAO EL0 . . . C 2 7.38 -2.783 -12.516 1 13.86 ? CAO EL0 1201 A 1 
HETATM 18 N NAP EL0 . . . C 2 6.7 -1.871 -11.852 1 13.52 ? NAP EL0 1201 A 1 
HETATM 19 C CAL EL0 . . . C 2 7.544 -1.202 -11.01 1 11.52 ? CAL EL0 1201 A 1 
HETATM 20 C CAM EL0 . . . C 2 7.325 -0.175 -10.108 1 10.93 ? CAM EL0 1201 A 1 
HETATM 21 C CAH EL0 . . . C 2 8.337 0.363 -9.315 1 10.96 ? CAH EL0 1201 A 1 
HETATM 22 C CAA EL0 . . . C 2 8.14 1.405 -8.399 1 10.36 ? CAA EL0 1201 A 1 
HETATM 23 C CAE EL0 . . . C 2 7.472 2.564 -8.672 1 10.55 ? CAE EL0 1201 A 1 
HETATM 24 C CAF EL0 . . . C 2 6.878 3.015 -9.972 1 11.04 ? CAF EL0 1201 A 1 
HETATM 25 O OAD EL0 . . . C 2 7.389 3.333 -7.63 1 9.49 ? OAD EL0 1201 A 1 
HETATM 26 N NAC EL0 . . . C 2 8.061 2.611 -6.552 1 11.77 ? NAC EL0 1201 A 1 
HETATM 27 C CAB EL0 . . . C 2 8.487 1.467 -7.098 1 10.95 ? CAB EL0 1201 A 1 
HETATM 28 C CAG EL0 . . . C 2 9.224 0.496 -6.255 1 10.43 ? CAG EL0 1201 A 1 
HETATM 29 C CAI EL0 . . . C 2 9.599 -0.245 -9.447 1 10.66 ? CAI EL0 1201 A 1 
HETATM 30 C CAJ EL0 . . . C 2 9.784 -1.277 -10.374 1 11.33 ? CAJ EL0 1201 A 1 
HETATM 31 C CAK EL0 . . . C 2 8.773 -1.754 -11.143 1 12.34 ? CAK EL0 1201 A 1 
HETATM 32 N NAN EL0 . . . C 2 8.667 -2.734 -12.113 1 13.16 ? NAN EL0 1201 A 1 
HETATM 33 C CAQ EL0 . . . C 2 9.791 -3.625 -12.549 1 16.45 ? CAQ EL0 1201 A 1 
HETATM 34 C CAV EL0 . . . C 2 10.884 -2.734 -13.022 1 18.32 ? CAV EL0 1201 A 1 
HETATM 35 C CAS EL0 . . . C 2 10.282 -4.519 -11.411 1 15.3 ? CAS EL0 1201 A 1 
HETATM 36 C CAT EL0 . . . C 2 11.759 -4.562 -11.631 1 17.41 ? CAT EL0 1201 A 1 
HETATM 37 N NAU EL0 . . . C 2 12.045 -3.563 -12.679 1 20.34 ? NAU EL0 1201 A 1 
HETATM 38 S SBB EL0 . . . C 2 13.62 -2.883 -12.987 1 22.01 ? SBB EL0 1201 A 1 
HETATM 39 O OBC EL0 . . . C 2 14.659 -3.352 -11.968 1 24.59 ? OBC EL0 1201 A 1 
HETATM 40 O OBD EL0 . . . C 2 13.676 -1.379 -13.294 1 27.84 ? OBD EL0 1201 A 1 
HETATM 41 C CBE EL0 . . . C 2 13.93 -3.758 -14.521 1 22.44 ? CBE EL0 1201 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           833 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           41 
#