data_7XJW
#
_model_server_result.job_id            ogyRkewsck1qn_mowDgwDQ 
_model_server_result.datetime_utc      '2024-11-15 06:24:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xjw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":401}' 
#
_entry.id    7XJW 
#
_exptl.entry_id    7XJW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              485.551 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.47 
_cell.angle_gamma         90 
_cell.entry_id            7XJW 
_cell.length_a            156.975 
_cell.length_b            125.749 
_cell.length_c            160.418 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XJW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,Q,R 1 1 
C,D,K,L,S,T 2 1 
E,F,M,N,U,V 3 1 
G,H,O,P,W,X 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 144 A CYS 144 1_555 I C21 K36 . A K36 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.641 ? 
covale ? covale2 C SG CYS 144 C CYS 144 1_555 K C21 K36 . C K36 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? 
covale ? covale3 E SG CYS 144 E CYS 144 1_555 M C21 K36 . E K36 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.708 ? 
covale ? covale4 G SG CYS 144 G CYS 144 1_555 O C21 K36 . G K36 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
#
_chem_comp.formula           'C21 H31 N3 O8 S' 
_chem_comp.formula_weight    485.551 
_chem_comp.id                K36 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid' 
_chem_comp.type              peptide-like 
_chem_comp.pdbx_synonyms     GC376 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O22 C21 K36 sing 173 n n 
C21 C20 K36 sing 174 n n 
C20 C24 K36 sing 175 n n 
C20 N19 K36 sing 176 n n 
C24 C25 K36 sing 177 n n 
C26 C27 K36 sing 178 n n 
C26 C25 K36 sing 179 n n 
C27 N28 K36 sing 180 n n 
O18 C17 K36 doub 181 n n 
N19 C17 K36 sing 182 n n 
C25 C29 K36 sing 183 n n 
C29 N28 K36 sing 184 n n 
C29 O30 K36 doub 185 n n 
C17 C12 K36 sing 186 n n 
C13 C12 K36 sing 187 n n 
C13 C14 K36 sing 188 n n 
C12 N11 K36 sing 189 n n 
C15 C14 K36 sing 190 n n 
C14 C16 K36 sing 191 n n 
N11 C9 K36 sing 192 n n 
O10 C9 K36 doub 193 n n 
C9 O8 K36 sing 194 n n 
O8 C7 K36 sing 195 n n 
C7 H1 K36 sing 196 n n 
C7 H2 K36 sing 197 n n 
N11 H4 K36 sing 198 n n 
C12 H5 K36 sing 199 n n 
C13 H6 K36 sing 200 n n 
C13 H7 K36 sing 201 n n 
C14 H8 K36 sing 202 n n 
C15 H9 K36 sing 203 n n 
C15 H10 K36 sing 204 n n 
C15 H11 K36 sing 205 n n 
C16 H12 K36 sing 206 n n 
C16 H13 K36 sing 207 n n 
C16 H14 K36 sing 208 n n 
N19 H15 K36 sing 209 n n 
C20 H16 K36 sing 210 n n 
C21 H17 K36 sing 211 n n 
O22 H19 K36 sing 212 n n 
C24 H20 K36 sing 213 n n 
C24 H21 K36 sing 214 n n 
C25 H22 K36 sing 215 n n 
C26 H23 K36 sing 216 n n 
C26 H24 K36 sing 217 n n 
C27 H25 K36 sing 218 n n 
C27 H26 K36 sing 219 n n 
N28 H27 K36 sing 220 n n 
C7 C1 K36 sing 221 n n 
C1 C2 K36 sing 222 n y 
C2 C3 K36 doub 223 n y 
C3 C4 K36 sing 224 n y 
C4 C5 K36 doub 225 n y 
C5 C6 K36 sing 226 n y 
C6 C1 K36 doub 227 n y 
C21 S1 K36 sing 228 n n 
S1 O1 K36 doub 229 n n 
S1 O2 K36 doub 230 n n 
S1 O3 K36 sing 231 n n 
C2 H3 K36 sing 232 n n 
C3 H18 K36 sing 233 n n 
C4 H28 K36 sing 234 n n 
C5 H29 K36 sing 235 n n 
C6 H30 K36 sing 236 n n 
O3 H31 K36 sing 237 n n 
#
_atom_sites.entry_id                     7XJW 
_atom_sites.fract_transf_matrix[1][1]    0.00637 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000835 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007952 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006287 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 2 K36 A 1 401 310 K36 K36 . 
J 2 K36 B 1 401 310 K36 K36 . 
K 2 K36 C 1 401 301 K36 K36 . 
L 2 K36 D 1 401 310 K36 K36 . 
M 2 K36 E 1 401 310 K36 K36 . 
N 2 K36 F 1 401 310 K36 K36 . 
O 2 K36 G 1 401 310 K36 K36 . 
P 2 K36 H 1 401 301 K36 K36 . 
Q 3 HOH A 1 501 59 HOH HOH . 
Q 3 HOH A 2 502 26 HOH HOH . 
Q 3 HOH A 3 503 58 HOH HOH . 
Q 3 HOH A 4 504 52 HOH HOH . 
Q 3 HOH A 5 505 67 HOH HOH . 
Q 3 HOH A 6 506 50 HOH HOH . 
Q 3 HOH A 7 507 47 HOH HOH . 
Q 3 HOH A 8 508 80 HOH HOH . 
Q 3 HOH A 9 509 78 HOH HOH . 
Q 3 HOH A 10 510 13 HOH HOH . 
Q 3 HOH A 11 511 85 HOH HOH . 
Q 3 HOH A 12 512 37 HOH HOH . 
Q 3 HOH A 13 513 68 HOH HOH . 
Q 3 HOH A 14 514 84 HOH HOH . 
Q 3 HOH A 15 515 10 HOH HOH . 
Q 3 HOH A 16 516 22 HOH HOH . 
Q 3 HOH A 17 517 92 HOH HOH . 
Q 3 HOH A 18 518 57 HOH HOH . 
Q 3 HOH A 19 519 76 HOH HOH . 
Q 3 HOH A 20 520 18 HOH HOH . 
Q 3 HOH A 21 521 79 HOH HOH . 
Q 3 HOH A 22 522 20 HOH HOH . 
Q 3 HOH A 23 523 4 HOH HOH . 
R 3 HOH B 1 501 43 HOH HOH . 
R 3 HOH B 2 502 44 HOH HOH . 
R 3 HOH B 3 503 61 HOH HOH . 
R 3 HOH B 4 504 21 HOH HOH . 
R 3 HOH B 5 505 96 HOH HOH . 
R 3 HOH B 6 506 94 HOH HOH . 
R 3 HOH B 7 507 55 HOH HOH . 
R 3 HOH B 8 508 64 HOH HOH . 
R 3 HOH B 9 509 60 HOH HOH . 
R 3 HOH B 10 510 31 HOH HOH . 
R 3 HOH B 11 511 29 HOH HOH . 
R 3 HOH B 12 512 93 HOH HOH . 
R 3 HOH B 13 513 95 HOH HOH . 
R 3 HOH B 14 514 105 HOH HOH . 
R 3 HOH B 15 515 106 HOH HOH . 
R 3 HOH B 16 516 65 HOH HOH . 
R 3 HOH B 17 517 83 HOH HOH . 
R 3 HOH B 18 518 53 HOH HOH . 
R 3 HOH B 19 519 86 HOH HOH . 
R 3 HOH B 20 520 77 HOH HOH . 
S 3 HOH C 1 501 30 HOH HOH . 
S 3 HOH C 2 502 62 HOH HOH . 
S 3 HOH C 3 503 48 HOH HOH . 
S 3 HOH C 4 504 32 HOH HOH . 
S 3 HOH C 5 505 8 HOH HOH . 
S 3 HOH C 6 506 75 HOH HOH . 
S 3 HOH C 7 507 88 HOH HOH . 
S 3 HOH C 8 508 45 HOH HOH . 
S 3 HOH C 9 509 1 HOH HOH . 
S 3 HOH C 10 510 74 HOH HOH . 
T 3 HOH D 1 501 17 HOH HOH . 
T 3 HOH D 2 502 36 HOH HOH . 
T 3 HOH D 3 503 14 HOH HOH . 
T 3 HOH D 4 504 16 HOH HOH . 
T 3 HOH D 5 505 19 HOH HOH . 
T 3 HOH D 6 506 46 HOH HOH . 
T 3 HOH D 7 507 72 HOH HOH . 
T 3 HOH D 8 508 33 HOH HOH . 
T 3 HOH D 9 509 87 HOH HOH . 
U 3 HOH E 1 501 35 HOH HOH . 
U 3 HOH E 2 502 5 HOH HOH . 
U 3 HOH E 3 503 54 HOH HOH . 
U 3 HOH E 4 504 25 HOH HOH . 
U 3 HOH E 5 505 11 HOH HOH . 
U 3 HOH E 6 506 27 HOH HOH . 
U 3 HOH E 7 507 82 HOH HOH . 
U 3 HOH E 8 508 9 HOH HOH . 
U 3 HOH E 9 509 38 HOH HOH . 
U 3 HOH E 10 510 34 HOH HOH . 
U 3 HOH E 11 511 51 HOH HOH . 
U 3 HOH E 12 512 99 HOH HOH . 
U 3 HOH E 13 513 81 HOH HOH . 
V 3 HOH F 1 501 6 HOH HOH . 
V 3 HOH F 2 502 7 HOH HOH . 
V 3 HOH F 3 503 2 HOH HOH . 
V 3 HOH F 4 504 107 HOH HOH . 
V 3 HOH F 5 505 42 HOH HOH . 
V 3 HOH F 6 506 23 HOH HOH . 
V 3 HOH F 7 507 56 HOH HOH . 
V 3 HOH F 8 508 40 HOH HOH . 
V 3 HOH F 9 509 91 HOH HOH . 
V 3 HOH F 10 510 90 HOH HOH . 
V 3 HOH F 11 511 15 HOH HOH . 
V 3 HOH F 12 512 89 HOH HOH . 
V 3 HOH F 13 513 41 HOH HOH . 
V 3 HOH F 14 514 73 HOH HOH . 
W 3 HOH G 1 501 108 HOH HOH . 
W 3 HOH G 2 502 71 HOH HOH . 
W 3 HOH G 3 503 12 HOH HOH . 
W 3 HOH G 4 504 28 HOH HOH . 
W 3 HOH G 5 505 98 HOH HOH . 
W 3 HOH G 6 506 100 HOH HOH . 
W 3 HOH G 7 507 101 HOH HOH . 
W 3 HOH G 8 508 69 HOH HOH . 
W 3 HOH G 9 509 97 HOH HOH . 
X 3 HOH H 1 501 63 HOH HOH . 
X 3 HOH H 2 502 66 HOH HOH . 
X 3 HOH H 3 503 24 HOH HOH . 
X 3 HOH H 4 504 103 HOH HOH . 
X 3 HOH H 5 505 49 HOH HOH . 
X 3 HOH H 6 506 39 HOH HOH . 
X 3 HOH H 7 507 70 HOH HOH . 
X 3 HOH H 8 508 3 HOH HOH . 
X 3 HOH H 9 509 104 HOH HOH . 
X 3 HOH H 10 510 102 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C7 K36 . . . K 2 -7.921 -14.623 18.05 1 36.48 ? C7 K36 401 C 1 
HETATM 2 O O8 K36 . . . K 2 -7.5 -14.241 19.357 1 35 ? O8 K36 401 C 1 
HETATM 3 C C9 K36 . . . K 2 -6.833 -12.992 19.312 1 36.63 ? C9 K36 401 C 1 
HETATM 4 O O10 K36 . . . K 2 -7.542 -12.042 19.498 1 44.16 ? O10 K36 401 C 1 
HETATM 5 C C1 K36 . . . K 2 -9.397 -15.011 18.081 1 35.34 ? C1 K36 401 C 1 
HETATM 6 C C2 K36 . . . K 2 -10.137 -14.881 16.899 1 33.58 ? C2 K36 401 C 1 
HETATM 7 C C3 K36 . . . K 2 -11.494 -15.249 16.887 1 31.73 ? C3 K36 401 C 1 
HETATM 8 C C4 K36 . . . K 2 -12.079 -15.739 18.074 1 32.72 ? C4 K36 401 C 1 
HETATM 9 C C5 K36 . . . K 2 -11.345 -15.854 19.253 1 33.52 ? C5 K36 401 C 1 
HETATM 10 C C6 K36 . . . K 2 -9.976 -15.496 19.27 1 32.96 ? C6 K36 401 C 1 
HETATM 11 N N11 K36 . . . K 2 -5.696 -12.762 18.384 1 39.8 ? N11 K36 401 C 1 
HETATM 12 C C12 K36 . . . K 2 -5.539 -11.428 17.944 1 42.17 ? C12 K36 401 C 1 
HETATM 13 C C17 K36 . . . K 2 -6.823 -10.937 17.195 1 43.54 ? C17 K36 401 C 1 
HETATM 14 O O18 K36 . . . K 2 -7.478 -11.696 16.508 1 43.08 ? O18 K36 401 C 1 
HETATM 15 C C13 K36 . . . K 2 -4.295 -11.258 17.04 1 40.01 ? C13 K36 401 C 1 
HETATM 16 C C14 K36 . . . K 2 -3.008 -10.784 17.828 1 40.53 ? C14 K36 401 C 1 
HETATM 17 C C15 K36 . . . K 2 -3.052 -11.164 19.338 1 40.89 ? C15 K36 401 C 1 
HETATM 18 C C16 K36 . . . K 2 -1.728 -11.324 17.182 1 38.53 ? C16 K36 401 C 1 
HETATM 19 N N19 K36 . . . K 2 -7.244 -9.547 17.351 1 43.34 ? N19 K36 401 C 1 
HETATM 20 C C20 K36 . . . K 2 -8.397 -8.991 16.699 1 40.16 ? C20 K36 401 C 1 
HETATM 21 C C21 K36 . . . K 2 -7.917 -7.688 16.178 1 39.69 ? C21 K36 401 C 1 
HETATM 22 O O22 K36 . . . K 2 -8.145 -7.476 14.779 1 47.82 ? O22 K36 401 C 1 
HETATM 23 C C24 K36 . . . K 2 -9.524 -8.754 17.747 1 39.88 ? C24 K36 401 C 1 
HETATM 24 C C25 K36 . . . K 2 -10.164 -10.107 18.341 1 43.68 ? C25 K36 401 C 1 
HETATM 25 C C26 K36 . . . K 2 -10.914 -10.819 17.24 1 42.16 ? C26 K36 401 C 1 
HETATM 26 C C27 K36 . . . K 2 -11.982 -11.605 18.032 1 47.6 ? C27 K36 401 C 1 
HETATM 27 N N28 K36 . . . K 2 -12.319 -10.815 19.145 1 45.58 ? N28 K36 401 C 1 
HETATM 28 C C29 K36 . . . K 2 -11.202 -9.85 19.367 1 46.34 ? C29 K36 401 C 1 
HETATM 29 O O30 K36 . . . K 2 -11.182 -9.034 20.25 1 45.32 ? O30 K36 401 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           29 
#