data_7XK7 # _model_server_result.job_id Kv6GnTKfQbEN9gtz6vfEzw _model_server_result.datetime_utc '2024-11-04 22:32:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xk7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":502}' # _entry.id 7XK7 # _exptl.entry_id 7XK7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 785.55 _entity.id 14 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XK7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XK7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 14 _struct_asym.id S _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? covale ? covale2 C OG1 THR 225 C THR 225 1_555 N P FMN . C FMN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? metalc ? metalc1 F N SER 75 F SER 75 1_555 R FE1 FES . F FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc2 F N GLY 77 F GLY 77 1_555 R FE1 FES . F FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XK7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 FMN B 1 501 600 FMN FMN . H 8 RBF B 1 502 601 RBF RBF . I 9 IQT B 1 503 602 IQT KRR . J 10 PEE B 1 504 603 PEE PEE . K 11 LMT B 1 505 604 LMT LMT . L 10 PEE B 1 506 605 PEE PEE . M 11 LMT B 1 507 302 LMT LMT . N 7 FMN C 1 301 301 FMN FMN . O 12 CA C 1 302 302 CA CA . P 10 PEE C 1 303 303 PEE PEE . Q 13 FES D 1 301 301 FES FES . R 13 FES F 1 501 501 FES FES . S 14 FAD F 1 502 502 FAD FAD . T 15 HOH A 1 501 7 HOH HOH . T 15 HOH A 2 502 17 HOH HOH . T 15 HOH A 3 503 16 HOH HOH . T 15 HOH A 4 504 18 HOH HOH . T 15 HOH A 5 505 13 HOH HOH . T 15 HOH A 6 506 12 HOH HOH . T 15 HOH A 7 507 9 HOH HOH . T 15 HOH A 8 508 5 HOH HOH . T 15 HOH A 9 509 14 HOH HOH . T 15 HOH A 10 510 1 HOH HOH . T 15 HOH A 11 511 22 HOH HOH . T 15 HOH A 12 512 2 HOH HOH . T 15 HOH A 13 513 19 HOH HOH . T 15 HOH A 14 514 10 HOH HOH . T 15 HOH A 15 515 8 HOH HOH . T 15 HOH A 16 516 3 HOH HOH . T 15 HOH A 17 517 11 HOH HOH . U 15 HOH B 1 601 34 HOH HOH . U 15 HOH B 2 602 32 HOH HOH . U 15 HOH B 3 603 23 HOH HOH . U 15 HOH B 4 604 25 HOH HOH . U 15 HOH B 5 605 33 HOH HOH . U 15 HOH B 6 606 20 HOH HOH . U 15 HOH B 7 607 31 HOH HOH . U 15 HOH B 8 608 30 HOH HOH . U 15 HOH B 9 609 28 HOH HOH . U 15 HOH B 10 610 21 HOH HOH . U 15 HOH B 11 611 26 HOH HOH . U 15 HOH B 12 612 27 HOH HOH . U 15 HOH B 13 613 29 HOH HOH . U 15 HOH B 14 614 15 HOH HOH . U 15 HOH B 15 615 24 HOH HOH . V 15 HOH C 1 401 35 HOH HOH . W 15 HOH E 1 201 38 HOH HOH . W 15 HOH E 2 202 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . S 14 127.818 104.713 158.698 1 71.92 ? PA FAD 502 F 1 HETATM 2 O O1A FAD . . . S 14 127.492 103.95 157.471 1 71.92 ? O1A FAD 502 F 1 HETATM 3 O O2A FAD . . . S 14 129.222 105.319 158.718 1 71.92 ? O2A FAD 502 F 1 HETATM 4 O O5B FAD . . . S 14 126.758 105.841 158.961 1 71.92 ? O5B FAD 502 F 1 HETATM 5 C C5B FAD . . . S 14 126.242 106.648 157.883 1 71.92 ? C5B FAD 502 F 1 HETATM 6 C C4B FAD . . . S 14 124.94 107.272 158.315 1 71.92 ? C4B FAD 502 F 1 HETATM 7 O O4B FAD . . . S 14 124.479 108.174 157.291 1 71.92 ? O4B FAD 502 F 1 HETATM 8 C C3B FAD . . . S 14 123.787 106.298 158.501 1 71.92 ? C3B FAD 502 F 1 HETATM 9 O O3B FAD . . . S 14 122.788 106.844 159.354 1 71.92 ? O3B FAD 502 F 1 HETATM 10 C C2B FAD . . . S 14 123.272 106.132 157.069 1 71.92 ? C2B FAD 502 F 1 HETATM 11 O O2B FAD . . . S 14 121.883 105.828 157.045 1 71.92 ? O2B FAD 502 F 1 HETATM 12 C C1B FAD . . . S 14 123.527 107.52 156.467 1 71.92 ? C1B FAD 502 F 1 HETATM 13 N N9A FAD . . . S 14 124.053 107.484 155.106 1 71.92 ? N9A FAD 502 F 1 HETATM 14 C C8A FAD . . . S 14 124.93 106.571 154.586 1 71.92 ? C8A FAD 502 F 1 HETATM 15 N N7A FAD . . . S 14 125.238 106.779 153.328 1 71.92 ? N7A FAD 502 F 1 HETATM 16 C C5A FAD . . . S 14 124.511 107.912 152.997 1 71.92 ? C5A FAD 502 F 1 HETATM 17 C C6A FAD . . . S 14 124.396 108.652 151.804 1 71.92 ? C6A FAD 502 F 1 HETATM 18 N N6A FAD . . . S 14 125.042 108.346 150.675 1 71.92 ? N6A FAD 502 F 1 HETATM 19 N N1A FAD . . . S 14 123.584 109.732 151.812 1 71.92 ? N1A FAD 502 F 1 HETATM 20 C C2A FAD . . . S 14 122.938 110.043 152.938 1 71.92 ? C2A FAD 502 F 1 HETATM 21 N N3A FAD . . . S 14 122.966 109.422 154.119 1 71.92 ? N3A FAD 502 F 1 HETATM 22 C C4A FAD . . . S 14 123.776 108.358 154.083 1 71.92 ? C4A FAD 502 F 1 HETATM 23 N N1 FAD . . . S 14 129.761 104.493 168.064 1 71.92 ? N1 FAD 502 F 1 HETATM 24 C C2 FAD . . . S 14 129.046 103.784 168.984 1 71.92 ? C2 FAD 502 F 1 HETATM 25 O O2 FAD . . . S 14 127.873 103.455 168.782 1 71.92 ? O2 FAD 502 F 1 HETATM 26 N N3 FAD . . . S 14 129.639 103.418 170.178 1 71.92 ? N3 FAD 502 F 1 HETATM 27 C C4 FAD . . . S 14 130.929 103.701 170.564 1 71.92 ? C4 FAD 502 F 1 HETATM 28 O O4 FAD . . . S 14 131.345 103.319 171.656 1 71.92 ? O4 FAD 502 F 1 HETATM 29 C C4X FAD . . . S 14 131.682 104.453 169.582 1 71.92 ? C4X FAD 502 F 1 HETATM 30 N N5 FAD . . . S 14 132.916 104.764 169.862 1 71.92 ? N5 FAD 502 F 1 HETATM 31 C C5X FAD . . . S 14 133.635 105.484 168.921 1 71.92 ? C5X FAD 502 F 1 HETATM 32 C C6 FAD . . . S 14 134.956 105.828 169.203 1 71.92 ? C6 FAD 502 F 1 HETATM 33 C C7 FAD . . . S 14 135.718 106.55 168.29 1 71.92 ? C7 FAD 502 F 1 HETATM 34 C C7M FAD . . . S 14 137.142 106.904 168.628 1 71.92 ? C7M FAD 502 F 1 HETATM 35 C C8 FAD . . . S 14 135.149 106.938 167.067 1 71.92 ? C8 FAD 502 F 1 HETATM 36 C C8M FAD . . . S 14 135.945 107.719 166.056 1 71.92 ? C8M FAD 502 F 1 HETATM 37 C C9 FAD . . . S 14 133.831 106.597 166.783 1 71.92 ? C9 FAD 502 F 1 HETATM 38 C C9A FAD . . . S 14 133.075 105.876 167.698 1 71.92 ? C9A FAD 502 F 1 HETATM 39 N N10 FAD . . . S 14 131.738 105.516 167.438 1 71.92 ? N10 FAD 502 F 1 HETATM 40 C C10 FAD . . . S 14 131.012 104.803 168.358 1 71.92 ? C10 FAD 502 F 1 HETATM 41 C C1' FAD . . . S 14 131.093 105.892 166.176 1 71.92 ? C1' FAD 502 F 1 HETATM 42 C C2' FAD . . . S 14 131.177 104.799 165.117 1 71.92 ? C2' FAD 502 F 1 HETATM 43 O O2' FAD . . . S 14 132.496 104.255 165.072 1 71.92 ? O2' FAD 502 F 1 HETATM 44 C C3' FAD . . . S 14 130.825 105.391 163.752 1 71.92 ? C3' FAD 502 F 1 HETATM 45 O O3' FAD . . . S 14 130.49 106.765 163.907 1 71.92 ? O3' FAD 502 F 1 HETATM 46 C C4' FAD . . . S 14 129.67 104.677 163.05 1 71.92 ? C4' FAD 502 F 1 HETATM 47 O O4' FAD . . . S 14 128.809 104.095 164.03 1 71.92 ? O4' FAD 502 F 1 HETATM 48 C C5' FAD . . . S 14 130.147 103.622 162.076 1 71.92 ? C5' FAD 502 F 1 HETATM 49 O O5' FAD . . . S 14 129.044 102.752 161.75 1 71.92 ? O5' FAD 502 F 1 HETATM 50 P P FAD . . . S 14 128.594 102.529 160.259 1 71.92 ? P FAD 502 F 1 HETATM 51 O O1P FAD . . . S 14 129.806 102.616 159.327 1 71.92 ? O1P FAD 502 F 1 HETATM 52 O O2P FAD . . . S 14 127.81 101.289 160.152 1 71.92 ? O2P FAD 502 F 1 HETATM 53 O O3P FAD . . . S 14 127.67 103.781 159.971 1 71.92 ? O3P FAD 502 F 1 # _model_server_stats.io_time_ms 123 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #