data_7XK7 # _model_server_result.job_id '_shfVCsPm-RYJZUMzVocug' _model_server_result.datetime_utc '2024-11-04 22:38:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xk7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":507}' # _entry.id 7XK7 # _exptl.entry_id 7XK7 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 510.615 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XK7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XK7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 K N N ? 11 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG1 THR 236 B THR 236 1_555 G P FMN . B FMN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.599 ? covale ? covale2 C OG1 THR 225 C THR 225 1_555 N P FMN . C FMN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? metalc ? metalc1 F N SER 75 F SER 75 1_555 R FE1 FES . F FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc2 F N GLY 77 F GLY 77 1_555 R FE1 FES . F FES 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XK7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 FMN B 1 501 600 FMN FMN . H 8 RBF B 1 502 601 RBF RBF . I 9 IQT B 1 503 602 IQT KRR . J 10 PEE B 1 504 603 PEE PEE . K 11 LMT B 1 505 604 LMT LMT . L 10 PEE B 1 506 605 PEE PEE . M 11 LMT B 1 507 302 LMT LMT . N 7 FMN C 1 301 301 FMN FMN . O 12 CA C 1 302 302 CA CA . P 10 PEE C 1 303 303 PEE PEE . Q 13 FES D 1 301 301 FES FES . R 13 FES F 1 501 501 FES FES . S 14 FAD F 1 502 502 FAD FAD . T 15 HOH A 1 501 7 HOH HOH . T 15 HOH A 2 502 17 HOH HOH . T 15 HOH A 3 503 16 HOH HOH . T 15 HOH A 4 504 18 HOH HOH . T 15 HOH A 5 505 13 HOH HOH . T 15 HOH A 6 506 12 HOH HOH . T 15 HOH A 7 507 9 HOH HOH . T 15 HOH A 8 508 5 HOH HOH . T 15 HOH A 9 509 14 HOH HOH . T 15 HOH A 10 510 1 HOH HOH . T 15 HOH A 11 511 22 HOH HOH . T 15 HOH A 12 512 2 HOH HOH . T 15 HOH A 13 513 19 HOH HOH . T 15 HOH A 14 514 10 HOH HOH . T 15 HOH A 15 515 8 HOH HOH . T 15 HOH A 16 516 3 HOH HOH . T 15 HOH A 17 517 11 HOH HOH . U 15 HOH B 1 601 34 HOH HOH . U 15 HOH B 2 602 32 HOH HOH . U 15 HOH B 3 603 23 HOH HOH . U 15 HOH B 4 604 25 HOH HOH . U 15 HOH B 5 605 33 HOH HOH . U 15 HOH B 6 606 20 HOH HOH . U 15 HOH B 7 607 31 HOH HOH . U 15 HOH B 8 608 30 HOH HOH . U 15 HOH B 9 609 28 HOH HOH . U 15 HOH B 10 610 21 HOH HOH . U 15 HOH B 11 611 26 HOH HOH . U 15 HOH B 12 612 27 HOH HOH . U 15 HOH B 13 613 29 HOH HOH . U 15 HOH B 14 614 15 HOH HOH . U 15 HOH B 15 615 24 HOH HOH . V 15 HOH C 1 401 35 HOH HOH . W 15 HOH E 1 201 38 HOH HOH . W 15 HOH E 2 202 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . M 11 117.426 162.113 123.842 1 40.42 ? C1B LMT 507 B 1 HETATM 2 C C2B LMT . . . M 11 117.017 162.75 125.186 1 40.42 ? C2B LMT 507 B 1 HETATM 3 C C3B LMT . . . M 11 117.668 164.139 125.404 1 40.42 ? C3B LMT 507 B 1 HETATM 4 C C4B LMT . . . M 11 117.614 165.028 124.131 1 40.42 ? C4B LMT 507 B 1 HETATM 5 C C5B LMT . . . M 11 118.036 164.195 122.906 1 40.42 ? C5B LMT 507 B 1 HETATM 6 C C6B LMT . . . M 11 119.541 163.928 122.915 1 40.42 ? C6B LMT 507 B 1 HETATM 7 O O1B LMT . . . M 11 116.595 161.019 123.628 1 40.42 ? O1B LMT 507 B 1 HETATM 8 O O2B LMT . . . M 11 115.653 162.855 125.174 1 40.42 ? O2B LMT 507 B 1 HETATM 9 O O3B LMT . . . M 11 118.928 164.049 125.949 1 40.42 ? O3B LMT 507 B 1 HETATM 10 O O4' LMT . . . M 11 116.339 165.507 123.933 1 40.42 ? O4' LMT 507 B 1 HETATM 11 O O5B LMT . . . M 11 117.292 163.008 122.781 1 40.42 ? O5B LMT 507 B 1 HETATM 12 O O6B LMT . . . M 11 120.006 163.802 121.633 1 40.42 ? O6B LMT 507 B 1 HETATM 13 C C1' LMT . . . M 11 119.353 157.932 122.984 1 40.42 ? C1' LMT 507 B 1 HETATM 14 C C2' LMT . . . M 11 118.93 158.723 121.725 1 40.42 ? C2' LMT 507 B 1 HETATM 15 C C3' LMT . . . M 11 118.23 160.054 122.105 1 40.42 ? C3' LMT 507 B 1 HETATM 16 C C4' LMT . . . M 11 117.139 159.798 123.157 1 40.42 ? C4' LMT 507 B 1 HETATM 17 C C5' LMT . . . M 11 117.864 159.078 124.31 1 40.42 ? C5' LMT 507 B 1 HETATM 18 C C6' LMT . . . M 11 117.062 158.942 125.573 1 40.42 ? C6' LMT 507 B 1 HETATM 19 O O1' LMT . . . M 11 119.731 156.666 122.636 1 40.42 ? O1' LMT 507 B 1 HETATM 20 O O2' LMT . . . M 11 120.058 159.02 121.009 1 40.42 ? O2' LMT 507 B 1 HETATM 21 O O3' LMT . . . M 11 117.691 160.642 121.002 1 40.42 ? O3' LMT 507 B 1 HETATM 22 O O5' LMT . . . M 11 118.258 157.81 123.878 1 40.42 ? O5' LMT 507 B 1 HETATM 23 O O6' LMT . . . M 11 117.368 157.707 126.077 1 40.42 ? O6' LMT 507 B 1 HETATM 24 C C1 LMT . . . M 11 119.107 155.631 123.357 1 40.42 ? C1 LMT 507 B 1 HETATM 25 C C2 LMT . . . M 11 120.11 155.235 124.394 1 40.42 ? C2 LMT 507 B 1 HETATM 26 C C3 LMT . . . M 11 119.677 154.2 125.375 1 40.42 ? C3 LMT 507 B 1 HETATM 27 C C4 LMT . . . M 11 120.706 154.171 126.47 1 40.42 ? C4 LMT 507 B 1 HETATM 28 C C5 LMT . . . M 11 120.477 153 127.358 1 40.42 ? C5 LMT 507 B 1 HETATM 29 C C6 LMT . . . M 11 120.811 151.718 126.68 1 40.42 ? C6 LMT 507 B 1 HETATM 30 C C7 LMT . . . M 11 122.294 151.605 126.508 1 40.42 ? C7 LMT 507 B 1 HETATM 31 C C8 LMT . . . M 11 122.902 151.239 127.814 1 40.42 ? C8 LMT 507 B 1 HETATM 32 C C9 LMT . . . M 11 123.944 150.176 127.725 1 40.42 ? C9 LMT 507 B 1 HETATM 33 C C10 LMT . . . M 11 125.095 150.611 128.584 1 40.42 ? C10 LMT 507 B 1 HETATM 34 C C11 LMT . . . M 11 125.729 149.453 129.282 1 40.42 ? C11 LMT 507 B 1 HETATM 35 C C12 LMT . . . M 11 124.833 148.888 130.332 1 40.42 ? C12 LMT 507 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #