data_7XKE # _model_server_result.job_id -5JCSSXOO5sMFNwo77Ht9A _model_server_result.datetime_utc '2024-12-26 10:07:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xke # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1001}' # _entry.id 7XKE # _exptl.entry_id 7XKE _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 288.424 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XKE _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XKE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 N CYS 22 1_555 D SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 D SG CYS 99 N CYS 99 1_555 D SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 E SG CYS 673 R CYS 686 1_555 E SG CYS 757 R CYS 770 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C19 H28 O2' _chem_comp.formula_weight 288.424 _chem_comp.id AND _chem_comp.mon_nstd_flag . _chem_comp.name 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 AND sing 13 n n C1 C10 AND sing 14 n n C1 H11 AND sing 15 n n C1 H12 AND sing 16 n n C2 C3 AND sing 17 n n C2 H21 AND sing 18 n n C2 H22 AND sing 19 n n C3 O3 AND sing 20 n n C3 C4 AND sing 21 n n C3 H3 AND sing 22 n n O3 HO3 AND sing 23 n n C4 C5 AND sing 24 n n C4 H41 AND sing 25 n n C4 H42 AND sing 26 n n C5 C6 AND doub 27 n n C5 C10 AND sing 28 n n C6 C7 AND sing 29 n n C6 H6 AND sing 30 n n C7 C8 AND sing 31 n n C7 H71 AND sing 32 n n C7 H72 AND sing 33 n n C8 C9 AND sing 34 n n C8 C14 AND sing 35 n n C8 H8 AND sing 36 n n C9 C10 AND sing 37 n n C9 C11 AND sing 38 n n C9 H9 AND sing 39 n n C10 C19 AND sing 40 n n C11 C12 AND sing 41 n n C11 H111 AND sing 42 n n C11 H112 AND sing 43 n n C12 C13 AND sing 44 n n C12 H121 AND sing 45 n n C12 H122 AND sing 46 n n C13 C14 AND sing 47 n n C13 C17 AND sing 48 n n C13 C18 AND sing 49 n n C14 C15 AND sing 50 n n C14 H14 AND sing 51 n n C15 C16 AND sing 52 n n C15 H151 AND sing 53 n n C15 H152 AND sing 54 n n C16 C17 AND sing 55 n n C16 H161 AND sing 56 n n C16 H162 AND sing 57 n n C17 O17 AND doub 58 n n C18 H181 AND sing 59 n n C18 H182 AND sing 60 n n C18 H183 AND sing 61 n n C19 H191 AND sing 62 n n C19 H192 AND sing 63 n n C19 H193 AND sing 64 n n # _atom_sites.entry_id 7XKE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 AND R 1 1001 901 AND AND . G 7 HOH R 1 1101 1001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 AND . . . F 6 130.869 97.611 141.99 1 129.72 ? C1 AND 1001 R 1 HETATM 2 C C2 AND . . . F 6 130.383 99.061 141.91 1 129.72 ? C2 AND 1001 R 1 HETATM 3 C C3 AND . . . F 6 129.005 99.181 141.304 1 129.72 ? C3 AND 1001 R 1 HETATM 4 O O3 AND . . . F 6 128.569 100.524 141.416 1 129.72 ? O3 AND 1001 R 1 HETATM 5 C C4 AND . . . F 6 127.997 98.266 142.019 1 129.72 ? C4 AND 1001 R 1 HETATM 6 C C5 AND . . . F 6 128.481 96.812 142.06 1 129.72 ? C5 AND 1001 R 1 HETATM 7 C C6 AND . . . F 6 127.393 95.55 142.306 1 129.72 ? C6 AND 1001 R 1 HETATM 8 C C7 AND . . . F 6 127.98 94.167 142.371 1 129.72 ? C7 AND 1001 R 1 HETATM 9 C C8 AND . . . F 6 129.4 94.123 143.171 1 129.72 ? C8 AND 1001 R 1 HETATM 10 C C9 AND . . . F 6 130.416 95.155 142.626 1 129.72 ? C9 AND 1001 R 1 HETATM 11 C C10 AND . . . F 6 129.845 96.677 142.676 1 129.72 ? C10 AND 1001 R 1 HETATM 12 C C11 AND . . . F 6 131.745 95.059 143.386 1 129.72 ? C11 AND 1001 R 1 HETATM 13 C C12 AND . . . F 6 132.315 93.521 143.459 1 129.72 ? C12 AND 1001 R 1 HETATM 14 C C13 AND . . . F 6 131.325 92.577 143.907 1 129.72 ? C13 AND 1001 R 1 HETATM 15 C C14 AND . . . F 6 129.962 92.713 143.137 1 129.72 ? C14 AND 1001 R 1 HETATM 16 C C15 AND . . . F 6 129.068 91.368 143.609 1 129.72 ? C15 AND 1001 R 1 HETATM 17 C C16 AND . . . F 6 130.251 90.266 144.255 1 129.72 ? C16 AND 1001 R 1 HETATM 18 C C17 AND . . . F 6 131.615 90.943 143.967 1 129.72 ? C17 AND 1001 R 1 HETATM 19 O O17 AND . . . F 6 132.659 90.402 143.822 1 129.72 ? O17 AND 1001 R 1 HETATM 20 C C18 AND . . . F 6 131.032 92.953 145.359 1 129.72 ? C18 AND 1001 R 1 HETATM 21 C C19 AND . . . F 6 129.739 97.077 144.147 1 129.72 ? C19 AND 1001 R 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #