data_7XLP # _model_server_result.job_id e5MGhKxLMivpRX6RvP3Xbg _model_server_result.datetime_utc '2024-10-26 02:36:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xlp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7XLP # _exptl.entry_id 7XLP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 463.959 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1~{R},3~{S})-3-[[6-[2-chloranyl-4-(4-methylpyrimidin-2-yl)oxy-phenyl]-3-methyl-1~{H}-indazol-4-yl]oxy]cyclohexan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7XLP _cell.length_a 76.76 _cell.length_b 76.76 _cell.length_c 222.438 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XLP _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 30 A ASP 65 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc2 A OD2 ASP 30 A ASP 65 1_555 D CA CA . A CA 403 11_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc3 A OD1 ASP 30 A ASP 65 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc4 A OD2 ASP 30 A ASP 65 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc5 A OD1 ASP 31 A ASP 66 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.697 ? metalc ? metalc6 A OD1 ASP 31 A ASP 66 1_555 D CA CA . A CA 403 11_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc7 A OD2 ASP 31 A ASP 66 1_555 E CA CA . A CA 404 11_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc8 E CA CA . A CA 404 1_555 G O HOH . A HOH 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc9 F CA CA . A CA 405 1_555 G O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.19 ? # _chem_comp.formula 'C25 H26 Cl N5 O2' _chem_comp.formula_weight 463.959 _chem_comp.id FZC _chem_comp.mon_nstd_flag . _chem_comp.name (1~{R},3~{S})-3-[[6-[2-chloranyl-4-(4-methylpyrimidin-2-yl)oxy-phenyl]-3-methyl-1~{H}-indazol-4-yl]oxy]cyclohexan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N24 C23 FZC sing 92 n n C01 C02 FZC sing 93 n n C25 C23 FZC sing 94 n n C25 C19 FZC sing 95 n n C23 C22 FZC sing 96 n n C22 C21 FZC sing 97 n n C28 C27 FZC sing 98 n n C02 C03 FZC doub 99 n y C02 N33 FZC sing 100 n y C03 C04 FZC sing 101 n y C27 N29 FZC doub 102 n y C27 C26 FZC sing 103 n y N29 N30 FZC sing 104 n y O18 C19 FZC sing 105 n n O18 C17 FZC sing 106 n n C21 C20 FZC sing 107 n n C19 C20 FZC sing 108 n n C26 C17 FZC sing 109 n y C26 C31 FZC doub 110 n y C17 C16 FZC doub 111 n y N30 C31 FZC sing 112 n y N33 C06 FZC doub 113 n y C31 C32 FZC sing 114 n y C10 C09 FZC doub 115 n y C10 C11 FZC sing 116 n y C16 C15 FZC sing 117 n y C09 C08 FZC sing 118 n y C32 C15 FZC doub 119 n y C15 C11 FZC sing 120 n n C04 N05 FZC doub 121 n y C11 C12 FZC doub 122 n y C06 N05 FZC sing 123 n y C06 O07 FZC sing 124 n n C08 O07 FZC sing 125 n n C08 C14 FZC doub 126 n y C12 C14 FZC sing 127 n y C12 CL1 FZC sing 128 n n C10 H1 FZC sing 129 n n C20 H2 FZC sing 130 n n C20 H3 FZC sing 131 n n C21 H4 FZC sing 132 n n C21 H5 FZC sing 133 n n C22 H6 FZC sing 134 n n C22 H7 FZC sing 135 n n C28 H8 FZC sing 136 n n C28 H9 FZC sing 137 n n C28 H10 FZC sing 138 n n C01 H11 FZC sing 139 n n C01 H12 FZC sing 140 n n C01 H13 FZC sing 141 n n C03 H14 FZC sing 142 n n C04 H15 FZC sing 143 n n C09 H16 FZC sing 144 n n C14 H17 FZC sing 145 n n C16 H18 FZC sing 146 n n C19 H19 FZC sing 147 n n C23 H20 FZC sing 148 n n C25 H21 FZC sing 149 n n C25 H22 FZC sing 150 n n C32 H23 FZC sing 151 n n N24 H24 FZC sing 152 n n N24 H25 FZC sing 153 n n N30 H26 FZC sing 154 n n # _atom_sites.entry_id 7XLP _atom_sites.fract_transf_matrix[1][1] 0.013028 _atom_sites.fract_transf_matrix[1][2] 0.007521 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015043 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FZC A 1 401 401 FZC LIG . C 3 DMS A 1 402 402 DMS DMS . D 4 CA A 1 403 501 CA CA . E 4 CA A 1 404 502 CA CA . F 4 CA A 1 405 503 CA CA . G 5 HOH A 1 501 651 HOH HOH . G 5 HOH A 2 502 635 HOH HOH . G 5 HOH A 3 503 659 HOH HOH . G 5 HOH A 4 504 663 HOH HOH . G 5 HOH A 5 505 625 HOH HOH . G 5 HOH A 6 506 656 HOH HOH . G 5 HOH A 7 507 636 HOH HOH . G 5 HOH A 8 508 639 HOH HOH . G 5 HOH A 9 509 638 HOH HOH . G 5 HOH A 10 510 642 HOH HOH . G 5 HOH A 11 511 608 HOH HOH . G 5 HOH A 12 512 637 HOH HOH . G 5 HOH A 13 513 666 HOH HOH . G 5 HOH A 14 514 605 HOH HOH . G 5 HOH A 15 515 616 HOH HOH . G 5 HOH A 16 516 634 HOH HOH . G 5 HOH A 17 517 604 HOH HOH . G 5 HOH A 18 518 652 HOH HOH . G 5 HOH A 19 519 622 HOH HOH . G 5 HOH A 20 520 601 HOH HOH . G 5 HOH A 21 521 629 HOH HOH . G 5 HOH A 22 522 657 HOH HOH . G 5 HOH A 23 523 624 HOH HOH . G 5 HOH A 24 524 650 HOH HOH . G 5 HOH A 25 525 615 HOH HOH . G 5 HOH A 26 526 611 HOH HOH . G 5 HOH A 27 527 612 HOH HOH . G 5 HOH A 28 528 614 HOH HOH . G 5 HOH A 29 529 617 HOH HOH . G 5 HOH A 30 530 610 HOH HOH . G 5 HOH A 31 531 623 HOH HOH . G 5 HOH A 32 532 602 HOH HOH . G 5 HOH A 33 533 628 HOH HOH . G 5 HOH A 34 534 618 HOH HOH . G 5 HOH A 35 535 621 HOH HOH . G 5 HOH A 36 536 664 HOH HOH . G 5 HOH A 37 537 661 HOH HOH . G 5 HOH A 38 538 641 HOH HOH . G 5 HOH A 39 539 646 HOH HOH . G 5 HOH A 40 540 649 HOH HOH . G 5 HOH A 41 541 620 HOH HOH . G 5 HOH A 42 542 643 HOH HOH . G 5 HOH A 43 543 655 HOH HOH . G 5 HOH A 44 544 675 HOH HOH . G 5 HOH A 45 545 632 HOH HOH . G 5 HOH A 46 546 645 HOH HOH . G 5 HOH A 47 547 660 HOH HOH . G 5 HOH A 48 548 673 HOH HOH . G 5 HOH A 49 549 647 HOH HOH . G 5 HOH A 50 550 648 HOH HOH . G 5 HOH A 51 551 665 HOH HOH . G 5 HOH A 52 552 613 HOH HOH . G 5 HOH A 53 553 671 HOH HOH . G 5 HOH A 54 554 626 HOH HOH . G 5 HOH A 55 555 640 HOH HOH . G 5 HOH A 56 556 631 HOH HOH . G 5 HOH A 57 557 654 HOH HOH . G 5 HOH A 58 558 603 HOH HOH . G 5 HOH A 59 559 658 HOH HOH . G 5 HOH A 60 560 619 HOH HOH . G 5 HOH A 61 561 674 HOH HOH . G 5 HOH A 62 562 606 HOH HOH . G 5 HOH A 63 563 644 HOH HOH . G 5 HOH A 64 564 662 HOH HOH . G 5 HOH A 65 565 653 HOH HOH . G 5 HOH A 66 566 633 HOH HOH . G 5 HOH A 67 567 607 HOH HOH . G 5 HOH A 68 568 609 HOH HOH . G 5 HOH A 69 569 668 HOH HOH . G 5 HOH A 70 570 670 HOH HOH . G 5 HOH A 71 571 667 HOH HOH . G 5 HOH A 72 572 672 HOH HOH . G 5 HOH A 73 573 669 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 FZC . . . B 2 -2.487 64.107 34.378 1 49.3 ? C10 FZC 401 A 1 HETATM 2 C C15 FZC . . . B 2 -2.511 66.608 34.818 1 42.88 ? C15 FZC 401 A 1 HETATM 3 C C17 FZC . . . B 2 -4.285 68.223 34.193 1 45.72 ? C17 FZC 401 A 1 HETATM 4 C C20 FZC . . . B 2 -8.039 68.068 34.118 1 54.69 ? C20 FZC 401 A 1 HETATM 5 C C21 FZC . . . B 2 -9.2 67.033 33.996 1 52.39 ? C21 FZC 401 A 1 HETATM 6 C C22 FZC . . . B 2 -9.063 66.046 32.819 1 54.38 ? C22 FZC 401 A 1 HETATM 7 C C26 FZC . . . B 2 -3.317 69.278 34.103 1 39.55 ? C26 FZC 401 A 1 HETATM 8 C C28 FZC . . . B 2 -4.537 71.57 33.408 1 49.28 ? C28 FZC 401 A 1 HETATM 9 C C01 FZC . . . B 2 1.983 60.687 32.409 1 60.52 ? C01 FZC 401 A 1 HETATM 10 C C02 FZC . . . B 2 1.155 60.101 33.553 1 60.97 ? C02 FZC 401 A 1 HETATM 11 C C03 FZC . . . B 2 1.174 58.694 33.766 1 60.39 ? C03 FZC 401 A 1 HETATM 12 C C04 FZC . . . B 2 0.385 58.189 34.845 1 65.95 ? C04 FZC 401 A 1 HETATM 13 C C06 FZC . . . B 2 -0.314 60.338 35.369 1 50.28 ? C06 FZC 401 A 1 HETATM 14 C C08 FZC . . . B 2 -1.43 62.505 35.852 1 52.14 ? C08 FZC 401 A 1 HETATM 15 C C09 FZC . . . B 2 -2.159 62.759 34.689 1 51.72 ? C09 FZC 401 A 1 HETATM 16 C C11 FZC . . . B 2 -2.119 65.217 35.192 1 49.48 ? C11 FZC 401 A 1 HETATM 17 C C12 FZC . . . B 2 -1.396 64.868 36.371 1 50.23 ? C12 FZC 401 A 1 HETATM 18 C C14 FZC . . . B 2 -1.044 63.542 36.722 1 54.37 ? C14 FZC 401 A 1 HETATM 19 C C16 FZC . . . B 2 -3.878 66.931 34.546 1 49.67 ? C16 FZC 401 A 1 HETATM 20 C C19 FZC . . . B 2 -6.613 67.423 34.043 1 53.38 ? C19 FZC 401 A 1 HETATM 21 C C23 FZC . . . B 2 -7.655 65.397 32.769 1 50.23 ? C23 FZC 401 A 1 HETATM 22 C C25 FZC . . . B 2 -6.541 66.519 32.751 1 44.95 ? C25 FZC 401 A 1 HETATM 23 C C27 FZC . . . B 2 -3.355 70.709 33.778 1 40.66 ? C27 FZC 401 A 1 HETATM 24 C C31 FZC . . . B 2 -1.979 68.954 34.375 1 39.21 ? C31 FZC 401 A 1 HETATM 25 C C32 FZC . . . B 2 -1.513 67.634 34.734 1 37.33 ? C32 FZC 401 A 1 HETATM 26 N N05 FZC . . . B 2 -0.347 59.017 35.632 1 50.97 ? N05 FZC 401 A 1 HETATM 27 N N24 FZC . . . B 2 -7.532 64.509 31.571 1 50.53 ? N24 FZC 401 A 1 HETATM 28 N N29 FZC . . . B 2 -2.054 71.183 33.867 1 44.79 ? N29 FZC 401 A 1 HETATM 29 N N30 FZC . . . B 2 -1.211 70.121 34.229 1 37.28 ? N30 FZC 401 A 1 HETATM 30 N N33 FZC . . . B 2 0.413 60.946 34.351 1 54.47 ? N33 FZC 401 A 1 HETATM 31 O O07 FZC . . . B 2 -1.096 61.164 36.227 1 52.59 ? O07 FZC 401 A 1 HETATM 32 O O18 FZC . . . B 2 -5.643 68.509 33.92 1 55.18 ? O18 FZC 401 A 1 HETATM 33 CL CL1 FZC . . . B 2 -0.904 66.221 37.461 1 55.19 ? CL1 FZC 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 33 #