data_7XM7
#
_model_server_result.job_id            px-U6F3EsMzFVtTx2hlqpw 
_model_server_result.datetime_utc      '2025-01-10 13:45:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xm7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1202}' 
#
_entry.id    7XM7 
#
_exptl.entry_id    7XM7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.5 
_cell.angle_gamma         90 
_cell.entry_id            7XM7 
_cell.length_a            53.969 
_cell.length_b            90.18 
_cell.length_c            59.11 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XM7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,N 1 1 
B,G,H,I,O 2 1 
C,J,K,P 3 1 
D,L,M,Q 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 199 n n 
C1 C2 GOL sing 200 n n 
C1 H11 GOL sing 201 n n 
C1 H12 GOL sing 202 n n 
O1 HO1 GOL sing 203 n n 
C2 O2 GOL sing 204 n n 
C2 C3 GOL sing 205 n n 
C2 H2 GOL sing 206 n n 
O2 HO2 GOL sing 207 n n 
C3 O3 GOL sing 208 n n 
C3 H31 GOL sing 209 n n 
C3 H32 GOL sing 210 n n 
O3 HO3 GOL sing 211 n n 
#
_atom_sites.entry_id                     7XM7 
_atom_sites.fract_transf_matrix[1][1]    0.018529 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007299 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011089 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018183 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GAY A 1 1201 2 GAY JHR . 
F 3 GOL A 1 1202 8 GOL GOL . 
G 2 GAY B 1 1201 1 GAY JHR . 
H 4 NO3 B 1 1202 4 NO3 NO3 . 
I 5 DMS B 1 1203 9 DMS DMS . 
J 6 PEG C 1 1201 3 PEG PEG . 
K 4 NO3 C 1 1202 5 NO3 NO3 . 
L 7 EDO D 1 1201 6 EDO EDO . 
M 7 EDO D 1 1202 7 EDO EDO . 
N 8 HOH A 1 1301 11 HOH HOH . 
N 8 HOH A 2 1302 49 HOH HOH . 
N 8 HOH A 3 1303 33 HOH HOH . 
N 8 HOH A 4 1304 8 HOH HOH . 
N 8 HOH A 5 1305 62 HOH HOH . 
N 8 HOH A 6 1306 69 HOH HOH . 
N 8 HOH A 7 1307 48 HOH HOH . 
N 8 HOH A 8 1308 7 HOH HOH . 
N 8 HOH A 9 1309 58 HOH HOH . 
N 8 HOH A 10 1310 61 HOH HOH . 
N 8 HOH A 11 1311 67 HOH HOH . 
N 8 HOH A 12 1312 59 HOH HOH . 
N 8 HOH A 13 1313 57 HOH HOH . 
N 8 HOH A 14 1314 34 HOH HOH . 
N 8 HOH A 15 1315 45 HOH HOH . 
N 8 HOH A 16 1316 55 HOH HOH . 
N 8 HOH A 17 1317 32 HOH HOH . 
N 8 HOH A 18 1318 9 HOH HOH . 
N 8 HOH A 19 1319 20 HOH HOH . 
N 8 HOH A 20 1320 35 HOH HOH . 
N 8 HOH A 21 1321 19 HOH HOH . 
N 8 HOH A 22 1322 54 HOH HOH . 
O 8 HOH B 1 1301 37 HOH HOH . 
O 8 HOH B 2 1302 71 HOH HOH . 
O 8 HOH B 3 1303 51 HOH HOH . 
O 8 HOH B 4 1304 41 HOH HOH . 
O 8 HOH B 5 1305 6 HOH HOH . 
O 8 HOH B 6 1306 46 HOH HOH . 
O 8 HOH B 7 1307 63 HOH HOH . 
O 8 HOH B 8 1308 36 HOH HOH . 
O 8 HOH B 9 1309 4 HOH HOH . 
O 8 HOH B 10 1310 56 HOH HOH . 
O 8 HOH B 11 1311 38 HOH HOH . 
O 8 HOH B 12 1312 52 HOH HOH . 
O 8 HOH B 13 1313 64 HOH HOH . 
O 8 HOH B 14 1314 72 HOH HOH . 
O 8 HOH B 15 1315 43 HOH HOH . 
O 8 HOH B 16 1316 30 HOH HOH . 
O 8 HOH B 17 1317 60 HOH HOH . 
O 8 HOH B 18 1318 70 HOH HOH . 
P 8 HOH C 1 1301 26 HOH HOH . 
P 8 HOH C 2 1302 1 HOH HOH . 
P 8 HOH C 3 1303 27 HOH HOH . 
P 8 HOH C 4 1304 22 HOH HOH . 
P 8 HOH C 5 1305 68 HOH HOH . 
P 8 HOH C 6 1306 50 HOH HOH . 
P 8 HOH C 7 1307 24 HOH HOH . 
P 8 HOH C 8 1308 23 HOH HOH . 
P 8 HOH C 9 1309 65 HOH HOH . 
P 8 HOH C 10 1310 10 HOH HOH . 
P 8 HOH C 11 1311 29 HOH HOH . 
P 8 HOH C 12 1312 31 HOH HOH . 
P 8 HOH C 13 1313 25 HOH HOH . 
P 8 HOH C 14 1314 28 HOH HOH . 
P 8 HOH C 15 1315 40 HOH HOH . 
P 8 HOH C 16 1316 42 HOH HOH . 
Q 8 HOH D 1 1301 66 HOH HOH . 
Q 8 HOH D 2 1302 2 HOH HOH . 
Q 8 HOH D 3 1303 44 HOH HOH . 
Q 8 HOH D 4 1304 53 HOH HOH . 
Q 8 HOH D 5 1305 17 HOH HOH . 
Q 8 HOH D 6 1306 47 HOH HOH . 
Q 8 HOH D 7 1307 18 HOH HOH . 
Q 8 HOH D 8 1308 5 HOH HOH . 
Q 8 HOH D 9 1309 3 HOH HOH . 
Q 8 HOH D 10 1310 16 HOH HOH . 
Q 8 HOH D 11 1311 15 HOH HOH . 
Q 8 HOH D 12 1312 12 HOH HOH . 
Q 8 HOH D 13 1313 13 HOH HOH . 
Q 8 HOH D 14 1314 21 HOH HOH . 
Q 8 HOH D 15 1315 14 HOH HOH . 
Q 8 HOH D 16 1316 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 3 -39.605 -5.22 -11.53 1 36.13 ? C1 GOL 1202 A 1 
HETATM 2 O O1 GOL . . . F 3 -38.626 -4.792 -10.575 1 32.99 ? O1 GOL 1202 A 1 
HETATM 3 C C2 GOL . . . F 3 -40.643 -6.235 -10.987 1 36.5 ? C2 GOL 1202 A 1 
HETATM 4 O O2 GOL . . . F 3 -40.145 -7.595 -11.135 1 34.03 ? O2 GOL 1202 A 1 
HETATM 5 C C3 GOL . . . F 3 -41.018 -5.861 -9.54 1 36.13 ? C3 GOL 1202 A 1 
HETATM 6 O O3 GOL . . . F 3 -41.92 -6.802 -8.936 1 34.61 ? O3 GOL 1202 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
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