data_7XMF # _model_server_result.job_id STtPHVPbLXVFqLyWDTUr1w _model_server_result.datetime_utc '2025-03-31 05:13:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xmf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":2303}' # _entry.id 7XMF # _exptl.entry_id 7XMF _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 407.441 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[[4-[3-(4-fluoranyl-2-methyl-phenoxy)azetidin-1-yl]pyrimidin-2-yl]amino]-~{N}-methyl-benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XMF _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XMF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n D NAG 1 D 1 NAG D 1 NAG 4 n D NAG 2 D 2 NAG D 2 NAG 4 n E NAG 1 E 1 NAG E 1 NAG 4 n E NAG 2 E 2 NAG E 2 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 275 A CYS 275 1_555 A SG CYS 315 A CYS 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 886 A CYS 897 1_555 A SG CYS 892 A CYS 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 924 A CYS 935 1_555 A SG CYS 933 A CYS 944 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf4 A SG CYS 1339 A CYS 1350 1_555 A SG CYS 1359 A CYS 1370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 A SG CYS 1704 A CYS 1715 1_555 A SG CYS 1719 A CYS 1730 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 21 B CYS 21 1_555 B SG CYS 43 B CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf7 B SG CYS 40 B CYS 40 1_555 B SG CYS 121 B CYS 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 C SG CYS 50 C CYS 50 1_555 C SG CYS 127 C CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? disulf ? disulf9 C SG CYS 72 C CYS 72 1_555 C SG CYS 75 C CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? covale ? covale1 A ND2 ASN 283 A ASN 283 1_555 G C1 NAG . A NAG 2302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale2 A ND2 ASN 1341 A ASN 1352 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale3 A ND2 ASN 1355 A ASN 1366 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale4 A ND2 ASN 1364 A ASN 1375 1_555 F C1 NAG . A NAG 2301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale5 B ND2 ASN 93 B ASN 93 1_555 I C1 NAG . B NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale6 B ND2 ASN 110 B ASN 110 1_555 J C1 NAG . B NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale7 B ND2 ASN 114 B ASN 114 1_555 K C1 NAG . B NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale8 B ND2 ASN 135 B ASN 135 1_555 L C1 NAG . B NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale9 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale10 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'C22 H22 F N5 O2' _chem_comp.formula_weight 407.441 _chem_comp.id G2W _chem_comp.mon_nstd_flag . _chem_comp.name 3-[[4-[3-(4-fluoranyl-2-methyl-phenoxy)azetidin-1-yl]pyrimidin-2-yl]amino]-~{N}-methyl-benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C25 G2W doub 83 n y C27 C28 G2W sing 84 n y C25 C23 G2W sing 85 n y C28 C26 G2W doub 86 n y C20 C15 G2W sing 87 n n C11 C09 G2W sing 88 n n C11 N04 G2W sing 89 n n O02 C09 G2W sing 90 n n O02 C13 G2W sing 91 n n C15 C13 G2W doub 92 n y C15 C19 G2W sing 93 n y C23 N07 G2W sing 94 n n C23 C24 G2W doub 95 n y C26 C24 G2W sing 96 n y C26 C29 G2W sing 97 n n N08 C30 G2W sing 98 n n N08 C29 G2W sing 99 n n C09 C10 G2W sing 100 n n C13 C16 G2W sing 101 n y C19 C22 G2W doub 102 n y N04 C12 G2W sing 103 n n N04 C10 G2W sing 104 n n N05 C12 G2W doub 105 n y N05 C17 G2W sing 106 n y N07 C17 G2W sing 107 n n C12 C14 G2W sing 108 n y C17 N06 G2W doub 109 n y C29 O03 G2W doub 110 n n C14 C18 G2W doub 111 n y N06 C18 G2W sing 112 n y C16 C21 G2W doub 113 n y C22 C21 G2W sing 114 n y C22 F01 G2W sing 115 n n C10 H1 G2W sing 116 n n C10 H2 G2W sing 117 n n C20 H3 G2W sing 118 n n C20 H4 G2W sing 119 n n C20 H5 G2W sing 120 n n C21 H6 G2W sing 121 n n C24 H7 G2W sing 122 n n C28 H8 G2W sing 123 n n N07 H9 G2W sing 124 n n N08 H10 G2W sing 125 n n C09 H11 G2W sing 126 n n C11 H12 G2W sing 127 n n C11 H13 G2W sing 128 n n C14 H14 G2W sing 129 n n C16 H15 G2W sing 130 n n C18 H16 G2W sing 131 n n C19 H17 G2W sing 132 n n C25 H18 G2W sing 133 n n C27 H19 G2W sing 134 n n C30 H20 G2W sing 135 n n C30 H21 G2W sing 136 n n C30 H22 G2W sing 137 n n # _atom_sites.entry_id 7XMF _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 NAG A 1 2301 2005 NAG NAG . G 5 NAG A 1 2302 2006 NAG NAG . H 6 G2W A 1 2303 2201 G2W LIG . I 5 NAG B 1 501 301 NAG NAG . J 5 NAG B 1 502 302 NAG NAG . K 5 NAG B 1 503 303 NAG NAG . L 5 NAG B 1 504 304 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 G2W . . . H 6 131.94 129.807 133.772 1 20 ? C10 G2W 2303 A 1 HETATM 2 C C13 G2W . . . H 6 132.423 132.621 132.587 1 20 ? C13 G2W 2303 A 1 HETATM 3 C C15 G2W . . . H 6 131.125 133.298 132.199 1 20 ? C15 G2W 2303 A 1 HETATM 4 C C17 G2W . . . H 6 136.321 128.253 133.012 1 20 ? C17 G2W 2303 A 1 HETATM 5 C C20 G2W . . . H 6 130.107 132.577 131.314 1 20 ? C20 G2W 2303 A 1 HETATM 6 C C21 G2W . . . H 6 133.165 134.751 133.965 1 20 ? C21 G2W 2303 A 1 HETATM 7 C C22 G2W . . . H 6 131.861 135.426 133.573 1 20 ? C22 G2W 2303 A 1 HETATM 8 C C24 G2W . . . H 6 137.162 131.628 133.089 1 20 ? C24 G2W 2303 A 1 HETATM 9 C C26 G2W . . . H 6 137.318 133.002 132.425 1 20 ? C26 G2W 2303 A 1 HETATM 10 C C28 G2W . . . H 6 137.973 133.109 131.052 1 20 ? C28 G2W 2303 A 1 HETATM 11 F F01 G2W . . . H 6 131.602 136.682 134 1 20 ? F01 G2W 2303 A 1 HETATM 12 O O02 G2W . . . H 6 132.692 131.333 132.144 1 20 ? O02 G2W 2303 A 1 HETATM 13 O O03 G2W . . . H 6 136.359 134.211 134.206 1 20 ? O03 G2W 2303 A 1 HETATM 14 N N04 G2W . . . H 6 132.523 128.72 132.938 1 20 ? N04 G2W 2303 A 1 HETATM 15 N N05 G2W . . . H 6 134.99 128.879 132.946 1 20 ? N05 G2W 2303 A 1 HETATM 16 N N06 G2W . . . H 6 136.419 126.783 133.148 1 20 ? N06 G2W 2303 A 1 HETATM 17 N N07 G2W . . . H 6 137.531 129.051 132.966 1 20 ? N07 G2W 2303 A 1 HETATM 18 N N08 G2W . . . H 6 136.968 135.567 132.465 1 20 ? N08 G2W 2303 A 1 HETATM 19 C C09 G2W . . . H 6 131.654 130.517 132.532 1 20 ? C09 G2W 2303 A 1 HETATM 20 C C11 G2W . . . H 6 131.703 129.22 131.826 1 20 ? C11 G2W 2303 A 1 HETATM 21 C C12 G2W . . . H 6 133.801 128.065 132.999 1 20 ? C12 G2W 2303 A 1 HETATM 22 C C14 G2W . . . H 6 133.881 126.59 133.139 1 20 ? C14 G2W 2303 A 1 HETATM 23 C C16 G2W . . . H 6 133.438 133.337 133.465 1 20 ? C16 G2W 2303 A 1 HETATM 24 C C18 G2W . . . H 6 135.226 125.958 133.213 1 20 ? C18 G2W 2303 A 1 HETATM 25 C C19 G2W . . . H 6 130.847 134.709 132.695 1 20 ? C19 G2W 2303 A 1 HETATM 26 C C23 G2W . . . H 6 137.651 130.37 132.367 1 20 ? C23 G2W 2303 A 1 HETATM 27 C C25 G2W . . . H 6 138.314 130.494 130.998 1 20 ? C25 G2W 2303 A 1 HETATM 28 C C27 G2W . . . H 6 138.473 131.859 130.342 1 20 ? C27 G2W 2303 A 1 HETATM 29 C C29 G2W . . . H 6 136.835 134.276 133.123 1 20 ? C29 G2W 2303 A 1 HETATM 30 C C30 G2W . . . H 6 136.515 136.786 133.108 1 20 ? C30 G2W 2303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #