data_7XMW # _model_server_result.job_id 3bKMT1cXI77nTg_qpV2s7A _model_server_result.datetime_utc '2024-12-26 16:23:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 7XMW # _exptl.entry_id 7XMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 354.436 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XMW _cell.length_a 123.377 _cell.length_b 123.377 _cell.length_c 123.377 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 _symmetry.space_group_name_Hall 'P 4 2 3' _symmetry.space_group_name_H-M 'P 4 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 10 A CYS 4 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc2 A SG CYS 13 A CYS 7 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc3 A SG CYS 52 A CYS 46 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc4 A SG CYS 55 A CYS 49 1_555 D ZN ZN . A ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc5 B SG CYS 10 B CYS 4 1_555 F ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc6 B SG CYS 13 B CYS 7 1_555 F ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc7 B SG CYS 52 B CYS 46 1_555 F ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc8 B SG CYS 55 B CYS 49 1_555 F ZN ZN . B ZN 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C16 H34 O8' _chem_comp.formula_weight 354.436 _chem_comp.id PE4 _chem_comp.mon_nstd_flag . _chem_comp.name 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG4000' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PE4 sing 235 n n O1 HO1 PE4 sing 236 n n C1 C2 PE4 sing 237 n n C1 H11 PE4 sing 238 n n C1 H12 PE4 sing 239 n n C2 O2 PE4 sing 240 n n C2 H21 PE4 sing 241 n n C2 H22 PE4 sing 242 n n O2 C3 PE4 sing 243 n n C3 C4 PE4 sing 244 n n C3 H31 PE4 sing 245 n n C3 H32 PE4 sing 246 n n C4 O3 PE4 sing 247 n n C4 H41 PE4 sing 248 n n C4 H42 PE4 sing 249 n n O3 C5 PE4 sing 250 n n C5 C6 PE4 sing 251 n n C5 H51 PE4 sing 252 n n C5 H52 PE4 sing 253 n n C6 O4 PE4 sing 254 n n C6 H61 PE4 sing 255 n n C6 H62 PE4 sing 256 n n O4 C7 PE4 sing 257 n n C7 C8 PE4 sing 258 n n C7 H71 PE4 sing 259 n n C7 H72 PE4 sing 260 n n C8 O5 PE4 sing 261 n n C8 H81 PE4 sing 262 n n C8 H82 PE4 sing 263 n n O5 C9 PE4 sing 264 n n C9 C10 PE4 sing 265 n n C9 H91 PE4 sing 266 n n C9 H92 PE4 sing 267 n n C10 O6 PE4 sing 268 n n C10 H101 PE4 sing 269 n n C10 H102 PE4 sing 270 n n O6 C11 PE4 sing 271 n n C11 C12 PE4 sing 272 n n C11 H111 PE4 sing 273 n n C11 H112 PE4 sing 274 n n C12 O7 PE4 sing 275 n n C12 H121 PE4 sing 276 n n C12 H122 PE4 sing 277 n n O7 C13 PE4 sing 278 n n C13 C14 PE4 sing 279 n n C13 H131 PE4 sing 280 n n C13 H132 PE4 sing 281 n n C14 O8 PE4 sing 282 n n C14 H141 PE4 sing 283 n n C14 H142 PE4 sing 284 n n O8 C15 PE4 sing 285 n n C15 C16 PE4 sing 286 n n C15 H151 PE4 sing 287 n n C15 H152 PE4 sing 288 n n C16 H161 PE4 sing 289 n n C16 H162 PE4 sing 290 n n C16 H163 PE4 sing 291 n n # _atom_sites.entry_id 7XMW _atom_sites.fract_transf_matrix[1][1] 0.008105 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008105 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PE4 A 1 101 101 PE4 PE4 . D 3 ZN A 1 102 1 ZN ZN . E 2 PE4 B 1 101 101 PE4 PE4 . F 3 ZN B 1 102 2 ZN ZN . G 4 SE Z 1 7 7 SE SE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PE4 . . . E 2 34.791 22.866 21.347 1 120.28 ? O1 PE4 101 B 1 HETATM 2 C C1 PE4 . . . E 2 35.502 23.419 20.273 1 132.79 ? C1 PE4 101 B 1 HETATM 3 C C2 PE4 . . . E 2 35.354 24.943 20.28 1 142.39 ? C2 PE4 101 B 1 HETATM 4 O O2 PE4 . . . E 2 36.523 25.576 20.737 1 120.89 ? O2 PE4 101 B 1 HETATM 5 C C3 PE4 . . . E 2 36.524 26.978 20.615 1 109.82 ? C3 PE4 101 B 1 HETATM 6 C C4 PE4 . . . E 2 35.298 27.619 21.289 1 130.43 ? C4 PE4 101 B 1 HETATM 7 O O3 PE4 . . . E 2 35.384 29.012 21.444 1 131.22 ? O3 PE4 101 B 1 HETATM 8 C C5 PE4 . . . E 2 35.88 29.719 20.348 1 117.1 ? C5 PE4 101 B 1 HETATM 9 C C6 PE4 . . . E 2 34.994 29.552 19.114 1 125.29 ? C6 PE4 101 B 1 HETATM 10 O O4 PE4 . . . E 2 33.71 29.083 19.417 1 121.28 ? O4 PE4 101 B 1 HETATM 11 C C7 PE4 . . . E 2 32.936 28.779 18.283 1 117.74 ? C7 PE4 101 B 1 HETATM 12 C C8 PE4 . . . E 2 33.446 27.531 17.549 1 125.64 ? C8 PE4 101 B 1 HETATM 13 O O5 PE4 . . . E 2 32.479 26.516 17.53 1 126.91 ? O5 PE4 101 B 1 HETATM 14 C C9 PE4 . . . E 2 32.919 25.323 16.941 1 126.03 ? C9 PE4 101 B 1 HETATM 15 C C10 PE4 . . . E 2 31.797 24.292 16.987 1 132.23 ? C10 PE4 101 B 1 HETATM 16 O O6 PE4 . . . E 2 32.092 23.297 17.928 1 129.98 ? O6 PE4 101 B 1 HETATM 17 C C11 PE4 . . . E 2 32.811 22.214 17.412 1 130.38 ? C11 PE4 101 B 1 HETATM 18 C C12 PE4 . . . E 2 31.982 21.448 16.374 1 129.64 ? C12 PE4 101 B 1 HETATM 19 O O7 PE4 . . . E 2 31.582 20.213 16.888 1 130.58 ? O7 PE4 101 B 1 HETATM 20 C C13 PE4 . . . E 2 30.77 19.47 16.022 1 118.9 ? C13 PE4 101 B 1 HETATM 21 C C14 PE4 . . . E 2 30.4 18.152 16.697 1 128 ? C14 PE4 101 B 1 HETATM 22 O O8 PE4 . . . E 2 30.288 17.153 15.724 1 129.24 ? O8 PE4 101 B 1 HETATM 23 C C15 PE4 . . . E 2 29.929 15.9 16.229 1 121.23 ? C15 PE4 101 B 1 HETATM 24 C C16 PE4 . . . E 2 30.286 14.815 15.215 1 114.91 ? C16 PE4 101 B 1 HETATM 25 H HO1 PE4 . . . E 2 34.759 23.496 22.048 1 144.4 ? HO1 PE4 101 B 1 HETATM 26 H H11 PE4 . . . E 2 35.11 23.024 19.341 1 159.42 ? H11 PE4 101 B 1 HETATM 27 H H12 PE4 . . . E 2 36.551 23.159 20.363 1 159.42 ? H12 PE4 101 B 1 HETATM 28 H H21 PE4 . . . E 2 34.53 25.213 20.933 1 170.93 ? H21 PE4 101 B 1 HETATM 29 H H22 PE4 . . . E 2 35.142 25.281 19.271 1 170.93 ? H22 PE4 101 B 1 HETATM 30 H H31 PE4 . . . E 2 36.519 27.237 19.561 1 131.85 ? H31 PE4 101 B 1 HETATM 31 H H32 PE4 . . . E 2 37.423 27.369 21.079 1 131.85 ? H32 PE4 101 B 1 HETATM 32 H H41 PE4 . . . E 2 35.18 27.175 22.273 1 156.58 ? H41 PE4 101 B 1 HETATM 33 H H42 PE4 . . . E 2 34.424 27.397 20.686 1 156.58 ? H42 PE4 101 B 1 HETATM 34 H H51 PE4 . . . E 2 36.875 29.355 20.117 1 140.58 ? H51 PE4 101 B 1 HETATM 35 H H52 PE4 . . . E 2 35.93 30.772 20.605 1 140.58 ? H52 PE4 101 B 1 HETATM 36 H H61 PE4 . . . E 2 35.469 28.847 18.441 1 150.41 ? H61 PE4 101 B 1 HETATM 37 H H62 PE4 . . . E 2 34.902 30.515 18.623 1 150.41 ? H62 PE4 101 B 1 HETATM 38 H H71 PE4 . . . E 2 32.97 29.623 17.602 1 141.35 ? H71 PE4 101 B 1 HETATM 39 H H72 PE4 . . . E 2 31.912 28.607 18.595 1 141.35 ? H72 PE4 101 B 1 HETATM 40 H H81 PE4 . . . E 2 34.333 27.164 18.054 1 150.84 ? H81 PE4 101 B 1 HETATM 41 H H82 PE4 . . . E 2 33.695 27.8 16.528 1 150.84 ? H82 PE4 101 B 1 HETATM 42 H H91 PE4 . . . E 2 33.779 24.947 17.484 1 151.29 ? H91 PE4 101 B 1 HETATM 43 H H92 PE4 . . . E 2 33.196 25.51 15.909 1 151.29 ? H92 PE4 101 B 1 HETATM 44 H H101 PE4 . . . E 2 31.687 23.838 16.008 1 158.74 ? H101 PE4 101 B 1 HETATM 45 H H102 PE4 . . . E 2 30.87 24.784 17.264 1 158.74 ? H102 PE4 101 B 1 HETATM 46 H H111 PE4 . . . E 2 33.071 21.542 18.223 1 156.52 ? H111 PE4 101 B 1 HETATM 47 H H112 PE4 . . . E 2 33.716 22.582 16.941 1 156.52 ? H112 PE4 101 B 1 HETATM 48 H H121 PE4 . . . E 2 32.583 21.288 15.485 1 155.63 ? H121 PE4 101 B 1 HETATM 49 H H122 PE4 . . . E 2 31.104 22.031 16.117 1 155.63 ? H122 PE4 101 B 1 HETATM 50 H H131 PE4 . . . E 2 31.309 19.269 15.102 1 142.74 ? H131 PE4 101 B 1 HETATM 51 H H132 PE4 . . . E 2 29.869 20.03 15.798 1 142.74 ? H132 PE4 101 B 1 HETATM 52 H H141 PE4 . . . E 2 29.453 18.263 17.215 1 153.67 ? H141 PE4 101 B 1 HETATM 53 H H142 PE4 . . . E 2 31.172 17.88 17.41 1 153.67 ? H142 PE4 101 B 1 HETATM 54 H H151 PE4 . . . E 2 28.861 15.88 16.418 1 145.54 ? H151 PE4 101 B 1 HETATM 55 H H152 PE4 . . . E 2 30.463 15.718 17.155 1 145.54 ? H152 PE4 101 B 1 HETATM 56 H H161 PE4 . . . E 2 31.236 15.055 14.747 1 137.95 ? H161 PE4 101 B 1 HETATM 57 H H162 PE4 . . . E 2 29.512 14.76 14.455 1 137.95 ? H162 PE4 101 B 1 HETATM 58 H H163 PE4 . . . E 2 30.364 13.857 15.722 1 137.95 ? H163 PE4 101 B 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 58 #