data_7XN2
#
_model_server_result.job_id            hgZVU_UwaG-lHiRom4rGPw 
_model_server_result.datetime_utc      '2025-09-17 06:41:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xn2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    7XN2 
#
_exptl.entry_id    7XN2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          116.04 
_cell.angle_gamma         90 
_cell.entry_id            7XN2 
_cell.length_a            78.579 
_cell.length_b            49.703 
_cell.length_c            40.52 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XN2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -17.78822 0 36.406725 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7XN2 
_atom_sites.fract_transf_matrix[1][1]    0.012726 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006219 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02012 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027468 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 201 201 ATP ATP . 
C 3 PEG A 1 202 301 PEG PEG . 
D 4 HOH A 1 301 81 HOH HOH . 
D 4 HOH A 2 302 90 HOH HOH . 
D 4 HOH A 3 303 55 HOH HOH . 
D 4 HOH A 4 304 52 HOH HOH . 
D 4 HOH A 5 305 42 HOH HOH . 
D 4 HOH A 6 306 72 HOH HOH . 
D 4 HOH A 7 307 88 HOH HOH . 
D 4 HOH A 8 308 77 HOH HOH . 
D 4 HOH A 9 309 49 HOH HOH . 
D 4 HOH A 10 310 5 HOH HOH . 
D 4 HOH A 11 311 68 HOH HOH . 
D 4 HOH A 12 312 63 HOH HOH . 
D 4 HOH A 13 313 71 HOH HOH . 
D 4 HOH A 14 314 3 HOH HOH . 
D 4 HOH A 15 315 12 HOH HOH . 
D 4 HOH A 16 316 60 HOH HOH . 
D 4 HOH A 17 317 69 HOH HOH . 
D 4 HOH A 18 318 28 HOH HOH . 
D 4 HOH A 19 319 29 HOH HOH . 
D 4 HOH A 20 320 23 HOH HOH . 
D 4 HOH A 21 321 31 HOH HOH . 
D 4 HOH A 22 322 30 HOH HOH . 
D 4 HOH A 23 323 82 HOH HOH . 
D 4 HOH A 24 324 7 HOH HOH . 
D 4 HOH A 25 325 44 HOH HOH . 
D 4 HOH A 26 326 22 HOH HOH . 
D 4 HOH A 27 327 37 HOH HOH . 
D 4 HOH A 28 328 73 HOH HOH . 
D 4 HOH A 29 329 20 HOH HOH . 
D 4 HOH A 30 330 19 HOH HOH . 
D 4 HOH A 31 331 34 HOH HOH . 
D 4 HOH A 32 332 91 HOH HOH . 
D 4 HOH A 33 333 9 HOH HOH . 
D 4 HOH A 34 334 75 HOH HOH . 
D 4 HOH A 35 335 15 HOH HOH . 
D 4 HOH A 36 336 59 HOH HOH . 
D 4 HOH A 37 337 24 HOH HOH . 
D 4 HOH A 38 338 8 HOH HOH . 
D 4 HOH A 39 339 13 HOH HOH . 
D 4 HOH A 40 340 4 HOH HOH . 
D 4 HOH A 41 341 11 HOH HOH . 
D 4 HOH A 42 342 2 HOH HOH . 
D 4 HOH A 43 343 10 HOH HOH . 
D 4 HOH A 44 344 87 HOH HOH . 
D 4 HOH A 45 345 16 HOH HOH . 
D 4 HOH A 46 346 85 HOH HOH . 
D 4 HOH A 47 347 53 HOH HOH . 
D 4 HOH A 48 348 84 HOH HOH . 
D 4 HOH A 49 349 67 HOH HOH . 
D 4 HOH A 50 350 18 HOH HOH . 
D 4 HOH A 51 351 32 HOH HOH . 
D 4 HOH A 52 352 51 HOH HOH . 
D 4 HOH A 53 353 76 HOH HOH . 
D 4 HOH A 54 354 27 HOH HOH . 
D 4 HOH A 55 355 1 HOH HOH . 
D 4 HOH A 56 356 21 HOH HOH . 
D 4 HOH A 57 357 61 HOH HOH . 
D 4 HOH A 58 358 83 HOH HOH . 
D 4 HOH A 59 359 40 HOH HOH . 
D 4 HOH A 60 360 26 HOH HOH . 
D 4 HOH A 61 361 41 HOH HOH . 
D 4 HOH A 62 362 17 HOH HOH . 
D 4 HOH A 63 363 56 HOH HOH . 
D 4 HOH A 64 364 74 HOH HOH . 
D 4 HOH A 65 365 57 HOH HOH . 
D 4 HOH A 66 366 45 HOH HOH . 
D 4 HOH A 67 367 78 HOH HOH . 
D 4 HOH A 68 368 36 HOH HOH . 
D 4 HOH A 69 369 62 HOH HOH . 
D 4 HOH A 70 370 79 HOH HOH . 
D 4 HOH A 71 371 14 HOH HOH . 
D 4 HOH A 72 372 89 HOH HOH . 
D 4 HOH A 73 373 6 HOH HOH . 
D 4 HOH A 74 374 46 HOH HOH . 
D 4 HOH A 75 375 39 HOH HOH . 
D 4 HOH A 76 376 25 HOH HOH . 
D 4 HOH A 77 377 33 HOH HOH . 
D 4 HOH A 78 378 35 HOH HOH . 
D 4 HOH A 79 379 70 HOH HOH . 
D 4 HOH A 80 380 48 HOH HOH . 
D 4 HOH A 81 381 58 HOH HOH . 
D 4 HOH A 82 382 50 HOH HOH . 
D 4 HOH A 83 383 47 HOH HOH . 
D 4 HOH A 84 384 65 HOH HOH . 
D 4 HOH A 85 385 64 HOH HOH . 
D 4 HOH A 86 386 66 HOH HOH . 
D 4 HOH A 87 387 43 HOH HOH . 
D 4 HOH A 88 388 54 HOH HOH . 
D 4 HOH A 89 389 86 HOH HOH . 
D 4 HOH A 90 390 92 HOH HOH . 
D 4 HOH A 91 391 80 HOH HOH . 
D 4 HOH A 92 392 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . B 2 -11.187 3.595 -2.305 1 46.11 ? PG ATP 201 A 1 
HETATM 2 O O1G ATP . . . B 2 -12.552 3.476 -2.945 1 49.28 ? O1G ATP 201 A 1 
HETATM 3 O O2G ATP . . . B 2 -10.189 2.568 -2.787 1 45.81 ? O2G ATP 201 A 1 
HETATM 4 O O3G ATP . . . B 2 -10.624 4.99 -2.202 1 46.24 ? O3G ATP 201 A 1 
HETATM 5 P PB ATP . . . B 2 -12.638 3.466 0.233 1 47.7 ? PB ATP 201 A 1 
HETATM 6 O O1B ATP . . . B 2 -13.622 2.362 -0.037 1 45.71 ? O1B ATP 201 A 1 
HETATM 7 O O2B ATP . . . B 2 -12.977 4.932 0.171 1 53.11 ? O2B ATP 201 A 1 
HETATM 8 O O3B ATP . . . B 2 -11.366 3.198 -0.739 1 45.7 ? O3B ATP 201 A 1 
HETATM 9 P PA ATP . . . B 2 -12.105 3.886 3.069 1 47.93 ? PA ATP 201 A 1 
HETATM 10 O O1A ATP . . . B 2 -10.886 3.565 3.914 1 48.39 ? O1A ATP 201 A 1 
HETATM 11 O O2A ATP . . . B 2 -12.466 5.347 2.977 1 46.76 ? O2A ATP 201 A 1 
HETATM 12 O O3A ATP . . . B 2 -11.841 3.222 1.616 1 49.95 ? O3A ATP 201 A 1 
HETATM 13 O O5' ATP . . . B 2 -13.344 2.999 3.577 1 46.07 ? O5' ATP 201 A 1 
HETATM 14 C C5' ATP . . . B 2 -13.607 1.68 3.103 1 45.69 ? C5' ATP 201 A 1 
HETATM 15 C C4' ATP . . . B 2 -14.99 1.282 3.598 1 45.58 ? C4' ATP 201 A 1 
HETATM 16 O O4' ATP . . . B 2 -15.043 1.427 5.025 1 43.64 ? O4' ATP 201 A 1 
HETATM 17 C C3' ATP . . . B 2 -16.034 2.231 3.029 1 46.79 ? C3' ATP 201 A 1 
HETATM 18 O O3' ATP . . . B 2 -17.184 1.498 2.613 1 46.07 ? O3' ATP 201 A 1 
HETATM 19 C C2' ATP . . . B 2 -16.456 3.121 4.174 1 46.97 ? C2' ATP 201 A 1 
HETATM 20 O O2' ATP . . . B 2 -17.845 3.433 4.077 1 49.69 ? O2' ATP 201 A 1 
HETATM 21 C C1' ATP . . . B 2 -16.182 2.231 5.366 1 41 ? C1' ATP 201 A 1 
HETATM 22 N N9 ATP . . . B 2 -15.834 3.015 6.565 1 35.39 ? N9 ATP 201 A 1 
HETATM 23 C C8 ATP . . . B 2 -14.666 3.679 6.736 1 32.22 ? C8 ATP 201 A 1 
HETATM 24 N N7 ATP . . . B 2 -14.641 4.279 7.95 1 31.45 ? N7 ATP 201 A 1 
HETATM 25 C C5 ATP . . . B 2 -15.816 3.993 8.561 1 27.66 ? C5 ATP 201 A 1 
HETATM 26 C C6 ATP . . . B 2 -16.388 4.325 9.869 1 28.81 ? C6 ATP 201 A 1 
HETATM 27 N N6 ATP . . . B 2 -15.689 5.079 10.736 1 29.73 ? N6 ATP 201 A 1 
HETATM 28 N N1 ATP . . . B 2 -17.599 3.821 10.173 1 22.53 ? N1 ATP 201 A 1 
HETATM 29 C C2 ATP . . . B 2 -18.292 3.065 9.267 1 28.37 ? C2 ATP 201 A 1 
HETATM 30 N N3 ATP . . . B 2 -17.848 2.726 8.035 1 29.48 ? N3 ATP 201 A 1 
HETATM 31 C C4 ATP . . . B 2 -16.598 3.144 7.658 1 32.77 ? C4 ATP 201 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#