data_7XR4
#
_model_server_result.job_id            pa_EOWns3ZoGB90klC_qMQ 
_model_server_result.datetime_utc      '2025-02-05 16:57:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xr4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":602}' 
#
_entry.id    7XR4 
#
_exptl.entry_id    7XR4 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7XR4 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XR4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 O N N 
? 3 Y N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 515 n n 
CBA CAB Y01 sing 516 n n 
CBA CAN Y01 sing 517 n n 
CAN CAJ Y01 sing 518 n n 
CAJ CAO Y01 sing 519 n n 
CAO CBB Y01 sing 520 n n 
CBB CAC Y01 sing 521 n n 
CBB CBE Y01 sing 522 n n 
CBE CAP Y01 sing 523 n n 
CBE CBI Y01 sing 524 n n 
CAP CAQ Y01 sing 525 n n 
CAQ CBG Y01 sing 526 n n 
CBG CBI Y01 sing 527 n n 
CBG CBD Y01 sing 528 n n 
CBI CAE Y01 sing 529 n n 
CBI CAU Y01 sing 530 n n 
CAU CAS Y01 sing 531 n n 
CAS CBF Y01 sing 532 n n 
CBF CBD Y01 sing 533 n n 
CBF CBH Y01 sing 534 n n 
CBD CAK Y01 sing 535 n n 
CAK CAI Y01 sing 536 n n 
CAI CAZ Y01 doub 537 n n 
CAZ CAV Y01 sing 538 n n 
CAZ CBH Y01 sing 539 n n 
CAV CBC Y01 sing 540 n n 
CBH CAD Y01 sing 541 n n 
CBH CAT Y01 sing 542 n n 
CAT CAR Y01 sing 543 n n 
CAR CBC Y01 sing 544 n n 
CBC OAW Y01 sing 545 n n 
OAW CAY Y01 sing 546 n n 
CAY OAG Y01 doub 547 n n 
CAY CAM Y01 sing 548 n n 
CAM CAL Y01 sing 549 n n 
CAL CAX Y01 sing 550 n n 
CAX OAH Y01 sing 551 n n 
CAX OAF Y01 doub 552 n n 
CAA HAA1 Y01 sing 553 n n 
CAA HAA2 Y01 sing 554 n n 
CAA HAA3 Y01 sing 555 n n 
CBA HBA Y01 sing 556 n n 
CAB HAB1 Y01 sing 557 n n 
CAB HAB2 Y01 sing 558 n n 
CAB HAB3 Y01 sing 559 n n 
CAN HAN1 Y01 sing 560 n n 
CAN HAN2 Y01 sing 561 n n 
CAJ HAJ1 Y01 sing 562 n n 
CAJ HAJ2 Y01 sing 563 n n 
CAO HAO1 Y01 sing 564 n n 
CAO HAO2 Y01 sing 565 n n 
CBB HBB Y01 sing 566 n n 
CAC HAC1 Y01 sing 567 n n 
CAC HAC2 Y01 sing 568 n n 
CAC HAC3 Y01 sing 569 n n 
CBE HBE Y01 sing 570 n n 
CAP HAP1 Y01 sing 571 n n 
CAP HAP2 Y01 sing 572 n n 
CAQ HAQ1 Y01 sing 573 n n 
CAQ HAQ2 Y01 sing 574 n n 
CBG HBG Y01 sing 575 n n 
CBD HBD Y01 sing 576 n n 
CAE HAE1 Y01 sing 577 n n 
CAE HAE2 Y01 sing 578 n n 
CAE HAE3 Y01 sing 579 n n 
CAU HAU1 Y01 sing 580 n n 
CAU HAU2 Y01 sing 581 n n 
CAS HAS1 Y01 sing 582 n n 
CAS HAS2 Y01 sing 583 n n 
CBF HBF Y01 sing 584 n n 
CAK HAK1 Y01 sing 585 n n 
CAK HAK2 Y01 sing 586 n n 
CAI HAI Y01 sing 587 n n 
CAV HAV1 Y01 sing 588 n n 
CAV HAV2 Y01 sing 589 n n 
CBC HBC Y01 sing 590 n n 
CAD HAD1 Y01 sing 591 n n 
CAD HAD2 Y01 sing 592 n n 
CAD HAD3 Y01 sing 593 n n 
CAT HAT1 Y01 sing 594 n n 
CAT HAT2 Y01 sing 595 n n 
CAR HAR1 Y01 sing 596 n n 
CAR HAR2 Y01 sing 597 n n 
CAM HAM1 Y01 sing 598 n n 
CAM HAM2 Y01 sing 599 n n 
CAL HAL1 Y01 sing 600 n n 
CAL HAL2 Y01 sing 601 n n 
OAH HAH Y01 sing 602 n n 
#
_atom_sites.entry_id                     7XR4 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 GLU A 1 601 601 GLU GLU . 
E 3 Y01 A 1 602 602 Y01 Y01 . 
F 4 PC1 A 1 603 603 PC1 PC1 . 
G 4 PC1 A 1 604 604 PC1 PC1 . 
H 4 PC1 A 1 605 605 PC1 PC1 . 
I 4 PC1 A 1 606 606 PC1 PC1 . 
J 4 PC1 A 1 607 607 PC1 PC1 . 
K 4 PC1 A 1 608 608 PC1 PC1 . 
L 4 PC1 A 1 609 609 PC1 PC1 . 
M 4 PC1 A 1 610 610 PC1 PC1 . 
N 2 GLU B 1 601 601 GLU GLU . 
O 3 Y01 B 1 602 602 Y01 Y01 . 
P 4 PC1 B 1 603 603 PC1 PC1 . 
Q 4 PC1 B 1 604 604 PC1 PC1 . 
R 4 PC1 B 1 605 605 PC1 PC1 . 
S 4 PC1 B 1 606 606 PC1 PC1 . 
T 4 PC1 B 1 607 607 PC1 PC1 . 
U 4 PC1 B 1 608 608 PC1 PC1 . 
V 4 PC1 B 1 609 609 PC1 PC1 . 
W 4 PC1 B 1 610 610 PC1 PC1 . 
X 2 GLU C 1 601 601 GLU GLU . 
Y 3 Y01 C 1 602 602 Y01 Y01 . 
Z 4 PC1 C 1 603 603 PC1 PC1 . 
AA 4 PC1 C 1 604 604 PC1 PC1 . 
BA 4 PC1 C 1 605 605 PC1 PC1 . 
CA 4 PC1 C 1 606 606 PC1 PC1 . 
DA 4 PC1 C 1 607 607 PC1 PC1 . 
EA 4 PC1 C 1 608 608 PC1 PC1 . 
FA 4 PC1 C 1 609 609 PC1 PC1 . 
GA 4 PC1 C 1 610 610 PC1 PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . Y 3 167.937 111.476 129.254 1 46.03 ? CAA Y01 602 C 1 
HETATM 2 C CBA Y01 . . . Y 3 168.945 111.449 128.104 1 46.03 ? CBA Y01 602 C 1 
HETATM 3 C CAB Y01 . . . Y 3 169.275 112.879 127.686 1 46.03 ? CAB Y01 602 C 1 
HETATM 4 C CAN Y01 . . . Y 3 168.374 110.676 126.912 1 46.03 ? CAN Y01 602 C 1 
HETATM 5 C CAJ Y01 . . . Y 3 166.923 111.09 126.654 1 46.03 ? CAJ Y01 602 C 1 
HETATM 6 C CAO Y01 . . . Y 3 166.69 111.27 125.152 1 46.03 ? CAO Y01 602 C 1 
HETATM 7 C CBB Y01 . . . Y 3 165.653 110.282 124.608 1 46.03 ? CBB Y01 602 C 1 
HETATM 8 C CAC Y01 . . . Y 3 164.755 109.785 125.741 1 46.03 ? CAC Y01 602 C 1 
HETATM 9 C CBE Y01 . . . Y 3 164.757 110.944 123.55 1 46.03 ? CBE Y01 602 C 1 
HETATM 10 C CAP Y01 . . . Y 3 165.277 112.332 123.102 1 46.03 ? CAP Y01 602 C 1 
HETATM 11 C CAQ Y01 . . . Y 3 165.14 112.372 121.556 1 46.03 ? CAQ Y01 602 C 1 
HETATM 12 C CBG Y01 . . . Y 3 164.183 111.212 121.278 1 46.03 ? CBG Y01 602 C 1 
HETATM 13 C CBI Y01 . . . Y 3 164.726 110.141 122.258 1 46.03 ? CBI Y01 602 C 1 
HETATM 14 C CAE Y01 . . . Y 3 166.143 109.721 121.862 1 46.03 ? CAE Y01 602 C 1 
HETATM 15 C CAU Y01 . . . Y 3 163.788 108.949 122.248 1 46.03 ? CAU Y01 602 C 1 
HETATM 16 C CAS Y01 . . . Y 3 163.659 108.418 120.813 1 46.03 ? CAS Y01 602 C 1 
HETATM 17 C CBF Y01 . . . Y 3 163.191 109.512 119.866 1 46.03 ? CBF Y01 602 C 1 
HETATM 18 C CBD Y01 . . . Y 3 164.202 110.66 119.866 1 46.03 ? CBD Y01 602 C 1 
HETATM 19 C CAK Y01 . . . Y 3 163.735 111.771 118.914 1 46.03 ? CAK Y01 602 C 1 
HETATM 20 C CAI Y01 . . . Y 3 163.27 111.22 117.598 1 46.03 ? CAI Y01 602 C 1 
HETATM 21 C CAZ Y01 . . . Y 3 162.757 110.039 117.478 1 46.03 ? CAZ Y01 602 C 1 
HETATM 22 C CAV Y01 . . . Y 3 162.006 109.684 116.211 1 46.03 ? CAV Y01 602 C 1 
HETATM 23 C CBH Y01 . . . Y 3 162.99 108.956 118.474 1 46.03 ? CBH Y01 602 C 1 
HETATM 24 C CAD Y01 . . . Y 3 164.243 108.186 118.063 1 46.03 ? CAD Y01 602 C 1 
HETATM 25 C CAT Y01 . . . Y 3 161.813 107.985 118.449 1 46.03 ? CAT Y01 602 C 1 
HETATM 26 C CAR Y01 . . . Y 3 160.542 108.731 118.041 1 46.03 ? CAR Y01 602 C 1 
HETATM 27 C CBC Y01 . . . Y 3 160.605 109.183 116.579 1 46.03 ? CBC Y01 602 C 1 
HETATM 28 O OAW Y01 . . . Y 3 160.26 108.062 115.726 1 46.03 ? OAW Y01 602 C 1 
HETATM 29 C CAY Y01 . . . Y 3 158.975 107.942 115.364 1 46.03 ? CAY Y01 602 C 1 
HETATM 30 O OAG Y01 . . . Y 3 158.269 107.128 115.909 1 46.03 ? OAG Y01 602 C 1 
HETATM 31 C CAM Y01 . . . Y 3 158.41 108.813 114.274 1 46.03 ? CAM Y01 602 C 1 
HETATM 32 C CAL Y01 . . . Y 3 157.096 108.206 113.778 1 46.03 ? CAL Y01 602 C 1 
HETATM 33 C CAX Y01 . . . Y 3 157.37 107.189 112.699 1 46.03 ? CAX Y01 602 C 1 
HETATM 34 O OAH Y01 . . . Y 3 158.417 106.356 112.8 1 46.03 ? OAH Y01 602 C 1 
HETATM 35 O OAF Y01 . . . Y 3 156.641 107.12 111.739 1 46.03 ? OAF Y01 602 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           35 
#