data_7XR6 # _model_server_result.job_id aBUbslZkkXiUvUFNBrujiw _model_server_result.datetime_utc '2024-12-26 23:09:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xr6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":612}' # _entry.id 7XR6 # _exptl.entry_id 7XR6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 348.475 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'dodecyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XR6 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XR6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 O N N ? 5 BA N N ? 5 PA N N # _chem_comp.formula 'C18 H36 O6' _chem_comp.formula_weight 348.475 _chem_comp.id XKJ _chem_comp.mon_nstd_flag n _chem_comp.name 'dodecyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C27 XKJ sing 554 n n C28 C29 XKJ sing 555 n n C32 C31 XKJ sing 556 n n C32 C33 XKJ sing 557 n n C26 C27 XKJ sing 558 n n C26 C25 XKJ sing 559 n n C31 C30 XKJ sing 560 n n C29 C30 XKJ sing 561 n n C24 C25 XKJ sing 562 n n C24 C23 XKJ sing 563 n n C33 C34 XKJ sing 564 n n C23 O1 XKJ sing 565 n n O2 C2 XKJ sing 566 n n O1 C1 XKJ sing 567 n n C1 C2 XKJ sing 568 n n C1 O5 XKJ sing 569 n n C2 C3 XKJ sing 570 n n C3 O3 XKJ sing 571 n n C3 C4 XKJ sing 572 n n O5 C5 XKJ sing 573 n n C4 C5 XKJ sing 574 n n C4 O4 XKJ sing 575 n n C5 C6 XKJ sing 576 n n C6 O6 XKJ sing 577 n n C6 H61 XKJ sing 578 n n C6 H62 XKJ sing 579 n n C3 H3 XKJ sing 580 n n C24 H241 XKJ sing 581 n n C24 H242 XKJ sing 582 n n C26 H262 XKJ sing 583 n n C26 H261 XKJ sing 584 n n C28 H281 XKJ sing 585 n n C28 H282 XKJ sing 586 n n C5 H5 XKJ sing 587 n n C4 H4 XKJ sing 588 n n C1 H1 XKJ sing 589 n n C2 H2 XKJ sing 590 n n C23 H232 XKJ sing 591 n n C23 H231 XKJ sing 592 n n C25 H252 XKJ sing 593 n n C25 H251 XKJ sing 594 n n C27 H271 XKJ sing 595 n n C27 H272 XKJ sing 596 n n C29 H291 XKJ sing 597 n n C29 H292 XKJ sing 598 n n C30 H302 XKJ sing 599 n n C30 H301 XKJ sing 600 n n C31 H312 XKJ sing 601 n n C31 H311 XKJ sing 602 n n C32 H322 XKJ sing 603 n n C32 H321 XKJ sing 604 n n C33 H331 XKJ sing 605 n n C33 H332 XKJ sing 606 n n C34 H343 XKJ sing 607 n n C34 H342 XKJ sing 608 n n C34 H341 XKJ sing 609 n n O6 HO6 XKJ sing 610 n n O4 HO4 XKJ sing 611 n n O2 HO2 XKJ sing 612 n n O3 HO3 XKJ sing 613 n n # _atom_sites.entry_id 7XR6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GJ0 A 1 601 601 GJ0 WAY . E 3 Y01 A 1 602 602 Y01 Y01 . F 4 PC1 A 1 603 603 PC1 PC1 . G 4 PC1 A 1 604 604 PC1 PC1 . H 4 PC1 A 1 605 605 PC1 PC1 . I 4 PC1 A 1 606 606 PC1 PC1 . J 4 PC1 A 1 607 607 PC1 PC1 . K 4 PC1 A 1 608 608 PC1 PC1 . L 4 PC1 A 1 609 609 PC1 PC1 . M 4 PC1 A 1 610 610 PC1 PC1 . N 4 PC1 A 1 611 611 PC1 PC1 . O 5 XKJ A 1 612 612 XKJ DDM . P 4 PC1 A 1 613 613 PC1 PC1 . Q 2 GJ0 B 1 601 601 GJ0 WAY . R 3 Y01 B 1 602 602 Y01 Y01 . S 4 PC1 B 1 603 603 PC1 PC1 . T 4 PC1 B 1 604 604 PC1 PC1 . U 4 PC1 B 1 605 605 PC1 PC1 . V 4 PC1 B 1 606 606 PC1 PC1 . W 4 PC1 B 1 607 607 PC1 PC1 . X 4 PC1 B 1 608 608 PC1 PC1 . Y 4 PC1 B 1 609 609 PC1 PC1 . Z 4 PC1 B 1 610 610 PC1 PC1 . AA 4 PC1 B 1 611 611 PC1 PC1 . BA 5 XKJ B 1 612 612 XKJ DDM . CA 4 PC1 B 1 613 613 PC1 PC1 . DA 4 PC1 C 1 601 613 PC1 PC1 . EA 2 GJ0 C 1 602 601 GJ0 WAY . FA 3 Y01 C 1 603 602 Y01 Y01 . GA 4 PC1 C 1 604 603 PC1 PC1 . HA 4 PC1 C 1 605 604 PC1 PC1 . IA 4 PC1 C 1 606 605 PC1 PC1 . JA 4 PC1 C 1 607 606 PC1 PC1 . KA 4 PC1 C 1 608 607 PC1 PC1 . LA 4 PC1 C 1 609 608 PC1 PC1 . MA 4 PC1 C 1 610 609 PC1 PC1 . NA 4 PC1 C 1 611 610 PC1 PC1 . OA 4 PC1 C 1 612 611 PC1 PC1 . PA 5 XKJ C 1 613 612 XKJ DDM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 XKJ . . . O 5 116.426 158.82 120.506 1 60.22 ? C6 XKJ 612 A 1 HETATM 2 C C3 XKJ . . . O 5 118.921 161.517 119.368 1 60.22 ? C3 XKJ 612 A 1 HETATM 3 C C24 XKJ . . . O 5 116.003 163.221 124.136 1 60.22 ? C24 XKJ 612 A 1 HETATM 4 C C26 XKJ . . . O 5 114.304 164.242 125.654 1 60.22 ? C26 XKJ 612 A 1 HETATM 5 C C28 XKJ . . . O 5 112.963 165.56 127.281 1 60.22 ? C28 XKJ 612 A 1 HETATM 6 C C5 XKJ . . . O 5 116.991 160.226 120.327 1 60.22 ? C5 XKJ 612 A 1 HETATM 7 C C4 XKJ . . . O 5 118.241 160.149 119.449 1 60.22 ? C4 XKJ 612 A 1 HETATM 8 C C1 XKJ . . . O 5 117.743 162.067 121.479 1 60.22 ? C1 XKJ 612 A 1 HETATM 9 C C2 XKJ . . . O 5 119.09 162.1 120.768 1 60.22 ? C2 XKJ 612 A 1 HETATM 10 C C23 XKJ . . . O 5 116.952 163.636 123.016 1 60.22 ? C23 XKJ 612 A 1 HETATM 11 C C25 XKJ . . . O 5 114.902 164.269 124.252 1 60.22 ? C25 XKJ 612 A 1 HETATM 12 C C27 XKJ . . . O 5 113.359 165.429 125.813 1 60.22 ? C27 XKJ 612 A 1 HETATM 13 C C29 XKJ . . . O 5 112.221 166.873 127.506 1 60.22 ? C29 XKJ 612 A 1 HETATM 14 C C30 XKJ . . . O 5 112.056 167.109 129.006 1 60.22 ? C30 XKJ 612 A 1 HETATM 15 C C31 XKJ . . . O 5 111.513 168.515 129.243 1 60.22 ? C31 XKJ 612 A 1 HETATM 16 C C32 XKJ . . . O 5 111.647 168.877 130.72 1 60.22 ? C32 XKJ 612 A 1 HETATM 17 C C33 XKJ . . . O 5 113.121 168.866 131.119 1 60.22 ? C33 XKJ 612 A 1 HETATM 18 C C34 XKJ . . . O 5 113.284 169.491 132.502 1 60.22 ? C34 XKJ 612 A 1 HETATM 19 O O6 XKJ . . . O 5 116.784 158.334 121.77 1 60.22 ? O6 XKJ 612 A 1 HETATM 20 O O5 XKJ . . . O 5 117.314 160.743 121.585 1 60.22 ? O5 XKJ 612 A 1 HETATM 21 O O4 XKJ . . . O 5 117.873 159.738 118.164 1 60.22 ? O4 XKJ 612 A 1 HETATM 22 O O2 XKJ . . . O 5 119.542 163.424 120.679 1 60.22 ? O2 XKJ 612 A 1 HETATM 23 O O1 XKJ . . . O 5 117.87 162.614 122.761 1 60.22 ? O1 XKJ 612 A 1 HETATM 24 O O3 XKJ . . . O 5 120.177 161.371 118.77 1 60.22 ? O3 XKJ 612 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #