data_7XRS # _model_server_result.job_id VwjUqbq5zXI_YL4uZlo43Q _model_server_result.datetime_utc '2024-11-07 19:38:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xrs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7XRS # _exptl.entry_id 7XRS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 575.679 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.925 _cell.angle_gamma 90 _cell.entry_id 7XRS _cell.length_a 55.559 _cell.length_b 99.438 _cell.length_c 59.666 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XRS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C30 H33 N5 O5 S' _chem_comp.formula_weight 575.679 _chem_comp.id HUR _chem_comp.mon_nstd_flag . _chem_comp.name N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N4 C18 HUR sing 152 n n N4 C17 HUR sing 153 n n O5 C18 HUR doub 154 n n C18 C15 HUR sing 155 n n C17 C16 HUR sing 156 n n C16 C15 HUR sing 157 n n C15 C14 HUR sing 158 n n O4 C19 HUR doub 159 n n C14 C13 HUR sing 160 n n C19 C13 HUR sing 161 n n C19 C20 HUR sing 162 n n C13 N3 HUR sing 163 n n C20 N5 HUR doub 164 n y C20 S1 HUR sing 165 n y N5 C21 HUR sing 166 n y N3 C12 HUR sing 167 n n O3 C12 HUR doub 168 n n C12 C11 HUR sing 169 n n C21 C23 HUR doub 170 n y C21 C22 HUR sing 171 n y S1 C22 HUR sing 172 n y O2 C10 HUR doub 173 n n C23 C24 HUR sing 174 n y C22 C26 HUR doub 175 n y N1 C7 HUR sing 176 n y N1 C4 HUR sing 177 n y C10 C7 HUR sing 178 n n C10 N2 HUR sing 179 n n C11 N2 HUR sing 180 n n C11 C27 HUR sing 181 n n C24 C25 HUR doub 182 n y C7 C8 HUR doub 183 n y C3 C4 HUR doub 184 n y C3 C2 HUR sing 185 n y C26 C25 HUR sing 186 n y C4 C5 HUR sing 187 n y C27 C28 HUR sing 188 n n C2 C1 HUR doub 189 n y C8 C5 HUR sing 190 n y C5 C6 HUR doub 191 n y C30 C28 HUR sing 192 n n C28 C29 HUR sing 193 n n C1 C6 HUR sing 194 n y C6 O1 HUR sing 195 n n O1 C9 HUR sing 196 n n C1 H1 HUR sing 197 n n C11 H2 HUR sing 198 n n C13 H3 HUR sing 199 n n C14 H4 HUR sing 200 n n C14 H5 HUR sing 201 n n C15 H6 HUR sing 202 n n C16 H7 HUR sing 203 n n C16 H8 HUR sing 204 n n C17 H9 HUR sing 205 n n C17 H10 HUR sing 206 n n C2 H11 HUR sing 207 n n C23 H12 HUR sing 208 n n C24 H13 HUR sing 209 n n C25 H14 HUR sing 210 n n C26 H15 HUR sing 211 n n C27 H16 HUR sing 212 n n C27 H17 HUR sing 213 n n C28 H18 HUR sing 214 n n C29 H19 HUR sing 215 n n C29 H20 HUR sing 216 n n C29 H21 HUR sing 217 n n C3 H22 HUR sing 218 n n C30 H23 HUR sing 219 n n C30 H24 HUR sing 220 n n C30 H25 HUR sing 221 n n C8 H26 HUR sing 222 n n C9 H27 HUR sing 223 n n C9 H28 HUR sing 224 n n C9 H29 HUR sing 225 n n N1 H30 HUR sing 226 n n N2 H31 HUR sing 227 n n N3 H32 HUR sing 228 n n N4 H33 HUR sing 229 n n # _atom_sites.entry_id 7XRS _atom_sites.fract_transf_matrix[1][1] 0.017999 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005822 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010057 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017615 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HUR A 1 401 2 HUR HUR . D 2 HUR B 1 401 1 HUR HUR . E 3 HOH A 1 501 44 HOH HOH . E 3 HOH A 2 502 29 HOH HOH . E 3 HOH A 3 503 51 HOH HOH . E 3 HOH A 4 504 13 HOH HOH . E 3 HOH A 5 505 10 HOH HOH . E 3 HOH A 6 506 30 HOH HOH . E 3 HOH A 7 507 53 HOH HOH . E 3 HOH A 8 508 46 HOH HOH . E 3 HOH A 9 509 5 HOH HOH . E 3 HOH A 10 510 14 HOH HOH . E 3 HOH A 11 511 8 HOH HOH . E 3 HOH A 12 512 48 HOH HOH . E 3 HOH A 13 513 17 HOH HOH . E 3 HOH A 14 514 62 HOH HOH . E 3 HOH A 15 515 50 HOH HOH . E 3 HOH A 16 516 32 HOH HOH . E 3 HOH A 17 517 66 HOH HOH . E 3 HOH A 18 518 2 HOH HOH . E 3 HOH A 19 519 57 HOH HOH . E 3 HOH A 20 520 25 HOH HOH . E 3 HOH A 21 521 49 HOH HOH . E 3 HOH A 22 522 28 HOH HOH . E 3 HOH A 23 523 11 HOH HOH . E 3 HOH A 24 524 18 HOH HOH . E 3 HOH A 25 525 42 HOH HOH . E 3 HOH A 26 526 70 HOH HOH . E 3 HOH A 27 527 64 HOH HOH . E 3 HOH A 28 528 52 HOH HOH . E 3 HOH A 29 529 56 HOH HOH . E 3 HOH A 30 530 61 HOH HOH . E 3 HOH A 31 531 3 HOH HOH . E 3 HOH A 32 532 59 HOH HOH . E 3 HOH A 33 533 39 HOH HOH . E 3 HOH A 34 534 43 HOH HOH . E 3 HOH A 35 535 35 HOH HOH . E 3 HOH A 36 536 22 HOH HOH . E 3 HOH A 37 537 65 HOH HOH . E 3 HOH A 38 538 60 HOH HOH . E 3 HOH A 39 539 67 HOH HOH . E 3 HOH A 40 540 63 HOH HOH . E 3 HOH A 41 541 36 HOH HOH . E 3 HOH A 42 542 71 HOH HOH . F 3 HOH B 1 501 54 HOH HOH . F 3 HOH B 2 502 9 HOH HOH . F 3 HOH B 3 503 7 HOH HOH . F 3 HOH B 4 504 6 HOH HOH . F 3 HOH B 5 505 34 HOH HOH . F 3 HOH B 6 506 1 HOH HOH . F 3 HOH B 7 507 15 HOH HOH . F 3 HOH B 8 508 69 HOH HOH . F 3 HOH B 9 509 16 HOH HOH . F 3 HOH B 10 510 19 HOH HOH . F 3 HOH B 11 511 27 HOH HOH . F 3 HOH B 12 512 47 HOH HOH . F 3 HOH B 13 513 12 HOH HOH . F 3 HOH B 14 514 26 HOH HOH . F 3 HOH B 15 515 23 HOH HOH . F 3 HOH B 16 516 24 HOH HOH . F 3 HOH B 17 517 21 HOH HOH . F 3 HOH B 18 518 37 HOH HOH . F 3 HOH B 19 519 4 HOH HOH . F 3 HOH B 20 520 33 HOH HOH . F 3 HOH B 21 521 31 HOH HOH . F 3 HOH B 22 522 41 HOH HOH . F 3 HOH B 23 523 20 HOH HOH . F 3 HOH B 24 524 38 HOH HOH . F 3 HOH B 25 525 58 HOH HOH . F 3 HOH B 26 526 45 HOH HOH . F 3 HOH B 27 527 55 HOH HOH . F 3 HOH B 28 528 68 HOH HOH . F 3 HOH B 29 529 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HUR . . . C 2 -23.62 -7.878 -3.453 1 39.32 ? C1 HUR 401 A 1 HETATM 2 C C10 HUR . . . C 2 -21.339 -9.423 1.957 1 32.65 ? C10 HUR 401 A 1 HETATM 3 C C11 HUR . . . C 2 -21.093 -11.232 3.605 1 24.68 ? C11 HUR 401 A 1 HETATM 4 C C12 HUR . . . C 2 -19.6 -11.399 3.55 1 29.38 ? C12 HUR 401 A 1 HETATM 5 C C13 HUR . . . C 2 -17.425 -11.201 4.666 1 27.57 ? C13 HUR 401 A 1 HETATM 6 C C14 HUR . . . C 2 -16.641 -9.896 4.803 1 27.61 ? C14 HUR 401 A 1 HETATM 7 C C15 HUR . . . C 2 -16.73 -9.136 3.476 1 30.07 ? C15 HUR 401 A 1 HETATM 8 C C16 HUR . . . C 2 -16.045 -9.738 2.569 1 33.12 ? C16 HUR 401 A 1 HETATM 9 C C17 HUR . . . C 2 -15.259 -8.609 1.803 1 30.85 ? C17 HUR 401 A 1 HETATM 10 C C18 HUR . . . C 2 -16.144 -7.569 3.498 1 30.29 ? C18 HUR 401 A 1 HETATM 11 C C19 HUR . . . C 2 -17.028 -12.307 5.631 1 24.66 ? C19 HUR 401 A 1 HETATM 12 C C2 HUR . . . C 2 -22.915 -6.748 -3.168 1 39.91 ? C2 HUR 401 A 1 HETATM 13 C C20 HUR . . . C 2 -17.824 -13.564 5.609 1 25.08 ? C20 HUR 401 A 1 HETATM 14 C C21 HUR . . . C 2 -18.247 -15.542 4.741 1 29.39 ? C21 HUR 401 A 1 HETATM 15 C C22 HUR . . . C 2 -19.234 -15.572 5.69 1 31.73 ? C22 HUR 401 A 1 HETATM 16 C C23 HUR . . . C 2 -18.048 -16.597 3.866 1 31.7 ? C23 HUR 401 A 1 HETATM 17 C C24 HUR . . . C 2 -18.862 -17.687 3.945 1 36.11 ? C24 HUR 401 A 1 HETATM 18 C C25 HUR . . . C 2 -19.852 -17.715 4.918 1 35.77 ? C25 HUR 401 A 1 HETATM 19 C C26 HUR . . . C 2 -20.042 -16.667 5.787 1 30.39 ? C26 HUR 401 A 1 HETATM 20 C C27 HUR . . . C 2 -21.67 -12.583 3.986 1 24.65 ? C27 HUR 401 A 1 HETATM 21 C C28 HUR . . . C 2 -23.135 -12.508 4.208 1 30.95 ? C28 HUR 401 A 1 HETATM 22 C C29 HUR . . . C 2 -23.404 -11.546 5.311 1 32.76 ? C29 HUR 401 A 1 HETATM 23 C C3 HUR . . . C 2 -22.216 -6.66 -1.989 1 37.07 ? C3 HUR 401 A 1 HETATM 24 C C30 HUR . . . C 2 -23.809 -13.84 4.45 1 31.28 ? C30 HUR 401 A 1 HETATM 25 C C4 HUR . . . C 2 -22.227 -7.711 -1.061 1 34.29 ? C4 HUR 401 A 1 HETATM 26 C C5 HUR . . . C 2 -22.92 -8.817 -1.348 1 33.82 ? C5 HUR 401 A 1 HETATM 27 C C6 HUR . . . C 2 -23.627 -8.925 -2.569 1 38.99 ? C6 HUR 401 A 1 HETATM 28 C C7 HUR . . . C 2 -21.887 -8.928 0.644 1 36.34 ? C7 HUR 401 A 1 HETATM 29 C C8 HUR . . . C 2 -22.705 -9.617 -0.229 1 34.69 ? C8 HUR 401 A 1 HETATM 30 C C9 HUR . . . C 2 -24.653 -10.449 -4.092 1 40.99 ? C9 HUR 401 A 1 HETATM 31 N N1 HUR . . . C 2 -21.623 -7.818 0.117 1 33.14 ? N1 HUR 401 A 1 HETATM 32 N N2 HUR . . . C 2 -21.61 -10.738 2.369 1 25.19 ? N2 HUR 401 A 1 HETATM 33 N N3 HUR . . . C 2 -18.832 -11.046 4.689 1 24.54 ? N3 HUR 401 A 1 HETATM 34 N N4 HUR . . . C 2 -15.032 -7.553 2.901 1 34.07 ? N4 HUR 401 A 1 HETATM 35 N N5 HUR . . . C 2 -17.515 -14.411 4.732 1 28.34 ? N5 HUR 401 A 1 HETATM 36 O O1 HUR . . . C 2 -24.365 -10.044 -2.819 1 38.64 ? O1 HUR 401 A 1 HETATM 37 O O2 HUR . . . C 2 -20.692 -8.748 2.599 1 30.94 ? O2 HUR 401 A 1 HETATM 38 O O3 HUR . . . C 2 -19.101 -11.833 2.647 1 26.12 ? O3 HUR 401 A 1 HETATM 39 O O4 HUR . . . C 2 -16.057 -12.288 6.156 1 25.97 ? O4 HUR 401 A 1 HETATM 40 O O5 HUR . . . C 2 -16.024 -7.091 4.726 1 29.9 ? O5 HUR 401 A 1 HETATM 41 S S1 HUR . . . C 2 -19.11 -14.115 6.489 1 29.82 ? S1 HUR 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 41 #