data_7XT8 # _model_server_result.job_id LyHqTuoWLpxID2oT664L2w _model_server_result.datetime_utc '2024-10-20 07:37:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xt8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 7XT8 # _exptl.entry_id 7XT8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XT8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XT8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 23 N CYS 22 1_555 D SG CYS 97 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 D SG CYS 100 N CYS 99 1_555 D SG CYS 108 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 E SG CYS 232 R CYS 92 1_555 E SG CYS 323 R CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XT8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 401 1 CLR CLR . G 6 CLR R 1 402 2 CLR CLR . H 6 CLR R 1 403 3 CLR CLR . I 6 CLR R 1 404 4 CLR CLR . J 6 CLR R 1 405 5 CLR CLR . K 7 PLM R 1 406 6 PLM PLM . L 7 PLM R 1 407 7 PLM PLM . M 8 SRO R 1 408 1 SRO SRO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . G 6 111.264 135.544 104.516 1 41.25 ? C1 CLR 402 R 1 HETATM 2 C C2 CLR . . . G 6 112.035 135.34 105.837 1 41.25 ? C2 CLR 402 R 1 HETATM 3 C C3 CLR . . . G 6 113.337 136.147 105.89 1 41.25 ? C3 CLR 402 R 1 HETATM 4 C C4 CLR . . . G 6 114.26 135.747 104.752 1 41.25 ? C4 CLR 402 R 1 HETATM 5 C C5 CLR . . . G 6 113.527 135.092 103.607 1 41.25 ? C5 CLR 402 R 1 HETATM 6 C C6 CLR . . . G 6 114.008 133.98 103.107 1 41.25 ? C6 CLR 402 R 1 HETATM 7 C C7 CLR . . . G 6 113.74 133.589 101.683 1 41.25 ? C7 CLR 402 R 1 HETATM 8 C C8 CLR . . . G 6 112.545 134.291 101.084 1 41.25 ? C8 CLR 402 R 1 HETATM 9 C C9 CLR . . . G 6 111.512 134.585 102.203 1 41.25 ? C9 CLR 402 R 1 HETATM 10 C C10 CLR . . . G 6 112.128 135.56 103.255 1 41.25 ? C10 CLR 402 R 1 HETATM 11 C C11 CLR . . . G 6 110.244 135.108 101.634 1 41.25 ? C11 CLR 402 R 1 HETATM 12 C C12 CLR . . . G 6 109.63 134.271 100.579 1 41.25 ? C12 CLR 402 R 1 HETATM 13 C C13 CLR . . . G 6 110.634 134.004 99.43 1 41.25 ? C13 CLR 402 R 1 HETATM 14 C C14 CLR . . . G 6 111.872 133.364 100.083 1 41.25 ? C14 CLR 402 R 1 HETATM 15 C C15 CLR . . . G 6 112.75 132.939 98.893 1 41.25 ? C15 CLR 402 R 1 HETATM 16 C C16 CLR . . . G 6 111.609 132.472 97.87 1 41.25 ? C16 CLR 402 R 1 HETATM 17 C C17 CLR . . . G 6 110.258 132.944 98.456 1 41.25 ? C17 CLR 402 R 1 HETATM 18 C C18 CLR . . . G 6 110.955 135.312 98.694 1 41.25 ? C18 CLR 402 R 1 HETATM 19 C C19 CLR . . . G 6 112.221 136.988 102.734 1 41.25 ? C19 CLR 402 R 1 HETATM 20 C C20 CLR . . . G 6 109.3 133.395 97.314 1 41.25 ? C20 CLR 402 R 1 HETATM 21 C C21 CLR . . . G 6 107.972 133.852 97.902 1 41.25 ? C21 CLR 402 R 1 HETATM 22 C C22 CLR . . . G 6 109.024 132.23 96.368 1 41.25 ? C22 CLR 402 R 1 HETATM 23 C C23 CLR . . . G 6 108.372 132.728 95.08 1 41.25 ? C23 CLR 402 R 1 HETATM 24 C C24 CLR . . . G 6 107.133 131.898 94.792 1 41.25 ? C24 CLR 402 R 1 HETATM 25 C C25 CLR . . . G 6 106.325 132.538 93.674 1 41.25 ? C25 CLR 402 R 1 HETATM 26 C C26 CLR . . . G 6 105.302 131.529 93.155 1 41.25 ? C26 CLR 402 R 1 HETATM 27 C C27 CLR . . . G 6 105.591 133.773 94.191 1 41.25 ? C27 CLR 402 R 1 HETATM 28 O O1 CLR . . . G 6 113.038 137.516 105.79 1 41.25 ? O1 CLR 402 R 1 HETATM 29 H H11 CLR . . . G 6 110.731 136.49 104.583 1 41.25 ? H11 CLR 402 R 1 HETATM 30 H H12 CLR . . . G 6 110.536 134.745 104.427 1 41.25 ? H12 CLR 402 R 1 HETATM 31 H H21 CLR . . . G 6 111.4 135.651 106.659 1 41.25 ? H21 CLR 402 R 1 HETATM 32 H H22 CLR . . . G 6 112.27 134.286 105.947 1 41.25 ? H22 CLR 402 R 1 HETATM 33 H H3 CLR . . . G 6 113.835 135.955 106.834 1 41.25 ? H3 CLR 402 R 1 HETATM 34 H H41 CLR . . . G 6 115.004 135.052 105.135 1 41.25 ? H41 CLR 402 R 1 HETATM 35 H H42 CLR . . . G 6 114.761 136.634 104.382 1 41.25 ? H42 CLR 402 R 1 HETATM 36 H H6 CLR . . . G 6 114.594 133.323 103.736 1 41.25 ? H6 CLR 402 R 1 HETATM 37 H H71 CLR . . . G 6 114.615 133.828 101.089 1 41.25 ? H71 CLR 402 R 1 HETATM 38 H H72 CLR . . . G 6 113.571 132.521 101.645 1 41.25 ? H72 CLR 402 R 1 HETATM 39 H H8 CLR . . . G 6 112.875 135.201 100.606 1 41.25 ? H8 CLR 402 R 1 HETATM 40 H H9 CLR . . . G 6 111.29 133.645 102.7 1 41.25 ? H9 CLR 402 R 1 HETATM 41 H H111 CLR . . . G 6 109.524 135.203 102.442 1 41.25 ? H111 CLR 402 R 1 HETATM 42 H H112 CLR . . . G 6 110.411 136.088 101.211 1 41.25 ? H112 CLR 402 R 1 HETATM 43 H H121 CLR . . . G 6 109.319 133.327 101.009 1 41.25 ? H121 CLR 402 R 1 HETATM 44 H H122 CLR . . . G 6 108.769 134.794 100.196 1 41.25 ? H122 CLR 402 R 1 HETATM 45 H H14 CLR . . . G 6 111.555 132.471 100.608 1 41.25 ? H14 CLR 402 R 1 HETATM 46 H H151 CLR . . . G 6 113.314 133.779 98.498 1 41.25 ? H151 CLR 402 R 1 HETATM 47 H H152 CLR . . . G 6 113.397 132.112 99.16 1 41.25 ? H152 CLR 402 R 1 HETATM 48 H H161 CLR . . . G 6 111.615 131.392 97.779 1 41.25 ? H161 CLR 402 R 1 HETATM 49 H H162 CLR . . . G 6 111.773 132.931 96.903 1 41.25 ? H162 CLR 402 R 1 HETATM 50 H H17 CLR . . . G 6 109.805 132.121 98.994 1 41.25 ? H17 CLR 402 R 1 HETATM 51 H H181 CLR . . . G 6 110.027 135.774 98.365 1 41.25 ? H181 CLR 402 R 1 HETATM 52 H H182 CLR . . . G 6 111.573 135.11 97.827 1 41.25 ? H182 CLR 402 R 1 HETATM 53 H H183 CLR . . . G 6 111.472 136.01 99.342 1 41.25 ? H183 CLR 402 R 1 HETATM 54 H H191 CLR . . . G 6 111.237 137.437 102.706 1 41.25 ? H191 CLR 402 R 1 HETATM 55 H H192 CLR . . . G 6 112.644 136.991 101.734 1 41.25 ? H192 CLR 402 R 1 HETATM 56 H H193 CLR . . . G 6 112.858 137.574 103.389 1 41.25 ? H193 CLR 402 R 1 HETATM 57 H H20 CLR . . . G 6 109.742 134.199 96.746 1 41.25 ? H20 CLR 402 R 1 HETATM 58 H H211 CLR . . . G 6 107.163 133.633 97.213 1 41.25 ? H211 CLR 402 R 1 HETATM 59 H H212 CLR . . . G 6 107.792 133.327 98.833 1 41.25 ? H212 CLR 402 R 1 HETATM 60 H H213 CLR . . . G 6 108.003 134.923 98.087 1 41.25 ? H213 CLR 402 R 1 HETATM 61 H H221 CLR . . . G 6 109.948 131.722 96.11 1 41.25 ? H221 CLR 402 R 1 HETATM 62 H H222 CLR . . . G 6 108.358 131.527 96.859 1 41.25 ? H222 CLR 402 R 1 HETATM 63 H H231 CLR . . . G 6 109.073 132.622 94.259 1 41.25 ? H231 CLR 402 R 1 HETATM 64 H H232 CLR . . . G 6 108.1 133.773 95.185 1 41.25 ? H232 CLR 402 R 1 HETATM 65 H H241 CLR . . . G 6 107.435 130.903 94.489 1 41.25 ? H241 CLR 402 R 1 HETATM 66 H H242 CLR . . . G 6 106.523 131.83 95.685 1 41.25 ? H242 CLR 402 R 1 HETATM 67 H H25 CLR . . . G 6 106.989 132.824 92.868 1 41.25 ? H25 CLR 402 R 1 HETATM 68 H H261 CLR . . . G 6 104.598 131.287 93.947 1 41.25 ? H261 CLR 402 R 1 HETATM 69 H H262 CLR . . . G 6 104.766 131.958 92.313 1 41.25 ? H262 CLR 402 R 1 HETATM 70 H H263 CLR . . . G 6 105.813 130.626 92.836 1 41.25 ? H263 CLR 402 R 1 HETATM 71 H H271 CLR . . . G 6 105.517 133.732 95.274 1 41.25 ? H271 CLR 402 R 1 HETATM 72 H H272 CLR . . . G 6 104.597 133.806 93.763 1 41.25 ? H272 CLR 402 R 1 HETATM 73 H H273 CLR . . . G 6 106.139 134.667 93.9 1 41.25 ? H273 CLR 402 R 1 HETATM 74 H H1 CLR . . . G 6 112.948 137.882 106.653 1 41.25 ? H1 CLR 402 R 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 74 #