data_7XT8 # _model_server_result.job_id l2npHw6nhMRuwrap8hOFFQ _model_server_result.datetime_utc '2024-10-20 07:32:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xt8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":403}' # _entry.id 7XT8 # _exptl.entry_id 7XT8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XT8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XT8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 23 N CYS 22 1_555 D SG CYS 97 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 D SG CYS 100 N CYS 99 1_555 D SG CYS 108 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 E SG CYS 232 R CYS 92 1_555 E SG CYS 323 R CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XT8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 401 1 CLR CLR . G 6 CLR R 1 402 2 CLR CLR . H 6 CLR R 1 403 3 CLR CLR . I 6 CLR R 1 404 4 CLR CLR . J 6 CLR R 1 405 5 CLR CLR . K 7 PLM R 1 406 6 PLM PLM . L 7 PLM R 1 407 7 PLM PLM . M 8 SRO R 1 408 1 SRO SRO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . H 6 96.689 99.696 80.598 1 68.02 ? C1 CLR 403 R 1 HETATM 2 C C2 CLR . . . H 6 95.438 99.614 79.701 1 68.02 ? C2 CLR 403 R 1 HETATM 3 C C3 CLR . . . H 6 95.728 100.153 78.299 1 68.02 ? C3 CLR 403 R 1 HETATM 4 C C4 CLR . . . H 6 96.863 99.353 77.688 1 68.02 ? C4 CLR 403 R 1 HETATM 5 C C5 CLR . . . H 6 98.083 99.317 78.577 1 68.02 ? C5 CLR 403 R 1 HETATM 6 C C6 CLR . . . H 6 99.259 99.298 77.995 1 68.02 ? C6 CLR 403 R 1 HETATM 7 C C7 CLR . . . H 6 100.521 99.539 78.767 1 68.02 ? C7 CLR 403 R 1 HETATM 8 C C8 CLR . . . H 6 100.467 98.946 80.153 1 68.02 ? C8 CLR 403 R 1 HETATM 9 C C9 CLR . . . H 6 99.175 99.441 80.851 1 68.02 ? C9 CLR 403 R 1 HETATM 10 C C10 CLR . . . H 6 97.919 98.972 80.05 1 68.02 ? C10 CLR 403 R 1 HETATM 11 C C11 CLR . . . H 6 99.145 98.997 82.269 1 68.02 ? C11 CLR 403 R 1 HETATM 12 C C12 CLR . . . H 6 100.336 99.361 83.072 1 68.02 ? C12 CLR 403 R 1 HETATM 13 C C13 CLR . . . H 6 101.639 98.861 82.4 1 68.02 ? C13 CLR 403 R 1 HETATM 14 C C14 CLR . . . H 6 101.639 99.45 80.977 1 68.02 ? C14 CLR 403 R 1 HETATM 15 C C15 CLR . . . H 6 103.032 99.105 80.42 1 68.02 ? C15 CLR 403 R 1 HETATM 16 C C16 CLR . . . H 6 103.905 99.285 81.75 1 68.02 ? C16 CLR 403 R 1 HETATM 17 C C17 CLR . . . H 6 102.91 99.425 82.926 1 68.02 ? C17 CLR 403 R 1 HETATM 18 C C18 CLR . . . H 6 101.689 97.327 82.411 1 68.02 ? C18 CLR 403 R 1 HETATM 19 C C19 CLR . . . H 6 97.678 97.474 80.166 1 68.02 ? C19 CLR 403 R 1 HETATM 20 C C20 CLR . . . H 6 103.49 98.726 84.188 1 68.02 ? C20 CLR 403 R 1 HETATM 21 C C21 CLR . . . H 6 102.521 98.823 85.36 1 68.02 ? C21 CLR 403 R 1 HETATM 22 C C22 CLR . . . H 6 104.8 99.405 84.576 1 68.02 ? C22 CLR 403 R 1 HETATM 23 C C23 CLR . . . H 6 105.935 98.385 84.503 1 68.02 ? C23 CLR 403 R 1 HETATM 24 C C24 CLR . . . H 6 107.244 98.983 84.998 1 68.02 ? C24 CLR 403 R 1 HETATM 25 C C25 CLR . . . H 6 107.688 100.18 84.167 1 68.02 ? C25 CLR 403 R 1 HETATM 26 C C26 CLR . . . H 6 109.074 100.618 84.634 1 68.02 ? C26 CLR 403 R 1 HETATM 27 C C27 CLR . . . H 6 107.765 99.816 82.687 1 68.02 ? C27 CLR 403 R 1 HETATM 28 O O1 CLR . . . H 6 94.581 100.023 77.499 1 68.02 ? O1 CLR 403 R 1 HETATM 29 H H11 CLR . . . H 6 96.437 99.268 81.565 1 68.02 ? H11 CLR 403 R 1 HETATM 30 H H12 CLR . . . H 6 96.94 100.742 80.734 1 68.02 ? H12 CLR 403 R 1 HETATM 31 H H21 CLR . . . H 6 94.643 100.202 80.148 1 68.02 ? H21 CLR 403 R 1 HETATM 32 H H22 CLR . . . H 6 95.122 98.578 79.625 1 68.02 ? H22 CLR 403 R 1 HETATM 33 H H3 CLR . . . H 6 96.015 101.196 78.364 1 68.02 ? H3 CLR 403 R 1 HETATM 34 H H41 CLR . . . H 6 96.523 98.335 77.515 1 68.02 ? H41 CLR 403 R 1 HETATM 35 H H42 CLR . . . H 6 97.135 99.803 76.74 1 68.02 ? H42 CLR 403 R 1 HETATM 36 H H6 CLR . . . H 6 99.321 99.082 76.936 1 68.02 ? H6 CLR 403 R 1 HETATM 37 H H71 CLR . . . H 6 101.349 99.093 78.228 1 68.02 ? H71 CLR 403 R 1 HETATM 38 H H72 CLR . . . H 6 100.682 100.605 78.85 1 68.02 ? H72 CLR 403 R 1 HETATM 39 H H8 CLR . . . H 6 100.485 97.87 80.074 1 68.02 ? H8 CLR 403 R 1 HETATM 40 H H9 CLR . . . H 6 99.189 100.527 80.844 1 68.02 ? H9 CLR 403 R 1 HETATM 41 H H111 CLR . . . H 6 98.281 99.449 82.748 1 68.02 ? H111 CLR 403 R 1 HETATM 42 H H112 CLR . . . H 6 99.034 97.923 82.308 1 68.02 ? H112 CLR 403 R 1 HETATM 43 H H121 CLR . . . H 6 100.38 100.438 83.171 1 68.02 ? H121 CLR 403 R 1 HETATM 44 H H122 CLR . . . H 6 100.236 98.914 84.047 1 68.02 ? H122 CLR 403 R 1 HETATM 45 H H14 CLR . . . H 6 101.561 100.528 81.054 1 68.02 ? H14 CLR 403 R 1 HETATM 46 H H151 CLR . . . H 6 103.07 98.082 80.058 1 68.02 ? H151 CLR 403 R 1 HETATM 47 H H152 CLR . . . H 6 103.333 99.812 79.656 1 68.02 ? H152 CLR 403 R 1 HETATM 48 H H161 CLR . . . H 6 104.531 98.413 81.897 1 68.02 ? H161 CLR 403 R 1 HETATM 49 H H162 CLR . . . H 6 104.514 100.177 81.671 1 68.02 ? H162 CLR 403 R 1 HETATM 50 H H17 CLR . . . H 6 102.765 100.476 83.14 1 68.02 ? H17 CLR 403 R 1 HETATM 51 H H181 CLR . . . H 6 102.633 96.979 81.997 1 68.02 ? H181 CLR 403 R 1 HETATM 52 H H182 CLR . . . H 6 100.875 96.906 81.838 1 68.02 ? H182 CLR 403 R 1 HETATM 53 H H183 CLR . . . H 6 101.602 96.97 83.433 1 68.02 ? H183 CLR 403 R 1 HETATM 54 H H191 CLR . . . H 6 97.291 97.242 81.15 1 68.02 ? H191 CLR 403 R 1 HETATM 55 H H192 CLR . . . H 6 96.951 97.169 79.419 1 68.02 ? H192 CLR 403 R 1 HETATM 56 H H193 CLR . . . H 6 98.602 96.929 80.005 1 68.02 ? H193 CLR 403 R 1 HETATM 57 H H20 CLR . . . H 6 103.694 97.688 83.977 1 68.02 ? H20 CLR 403 R 1 HETATM 58 H H211 CLR . . . H 6 101.788 98.026 85.297 1 68.02 ? H211 CLR 403 R 1 HETATM 59 H H212 CLR . . . H 6 103.06 98.724 86.295 1 68.02 ? H212 CLR 403 R 1 HETATM 60 H H213 CLR . . . H 6 102.015 99.785 85.333 1 68.02 ? H213 CLR 403 R 1 HETATM 61 H H221 CLR . . . H 6 104.999 100.228 83.896 1 68.02 ? H221 CLR 403 R 1 HETATM 62 H H222 CLR . . . H 6 104.735 99.795 85.589 1 68.02 ? H222 CLR 403 R 1 HETATM 63 H H231 CLR . . . H 6 105.681 97.538 85.132 1 68.02 ? H231 CLR 403 R 1 HETATM 64 H H232 CLR . . . H 6 106.047 98.038 83.482 1 68.02 ? H232 CLR 403 R 1 HETATM 65 H H241 CLR . . . H 6 107.117 99.298 86.027 1 68.02 ? H241 CLR 403 R 1 HETATM 66 H H242 CLR . . . H 6 108.015 98.222 84.957 1 68.02 ? H242 CLR 403 R 1 HETATM 67 H H25 CLR . . . H 6 106.995 101 84.305 1 68.02 ? H25 CLR 403 R 1 HETATM 68 H H261 CLR . . . H 6 109.335 101.561 84.159 1 68.02 ? H261 CLR 403 R 1 HETATM 69 H H262 CLR . . . H 6 109.071 100.745 85.712 1 68.02 ? H262 CLR 403 R 1 HETATM 70 H H263 CLR . . . H 6 109.804 99.862 84.361 1 68.02 ? H263 CLR 403 R 1 HETATM 71 H H271 CLR . . . H 6 106.812 100.035 82.21 1 68.02 ? H271 CLR 403 R 1 HETATM 72 H H272 CLR . . . H 6 108.545 100.399 82.214 1 68.02 ? H272 CLR 403 R 1 HETATM 73 H H273 CLR . . . H 6 107.991 98.757 82.582 1 68.02 ? H273 CLR 403 R 1 HETATM 74 H H1 CLR . . . H 6 94.8 100.213 76.603 1 68.02 ? H1 CLR 403 R 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 48 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 74 #