data_7XT8 # _model_server_result.job_id IjGPKCFojHV_5X0brJ5BZw _model_server_result.datetime_utc '2024-10-20 07:35:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xt8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":407}' # _entry.id 7XT8 # _exptl.entry_id 7XT8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XT8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XT8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 K N N ? 7 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 23 N CYS 22 1_555 D SG CYS 97 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 D SG CYS 100 N CYS 99 1_555 D SG CYS 108 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 E SG CYS 232 R CYS 92 1_555 E SG CYS 323 R CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7XT8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 CLR R 1 401 1 CLR CLR . G 6 CLR R 1 402 2 CLR CLR . H 6 CLR R 1 403 3 CLR CLR . I 6 CLR R 1 404 4 CLR CLR . J 6 CLR R 1 405 5 CLR CLR . K 7 PLM R 1 406 6 PLM PLM . L 7 PLM R 1 407 7 PLM PLM . M 8 SRO R 1 408 1 SRO SRO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . L 7 126.899 133.857 107.377 1 36.08 ? C1 PLM 407 R 1 HETATM 2 O O1 PLM . . . L 7 127.226 133.074 106.445 1 36.08 ? O1 PLM 407 R 1 HETATM 3 O O2 PLM . . . L 7 127.429 133.998 108.514 1 36.08 ? O2 PLM 407 R 1 HETATM 4 C C2 PLM . . . L 7 125.663 134.772 107.058 1 36.08 ? C2 PLM 407 R 1 HETATM 5 C C3 PLM . . . L 7 124.389 134.038 106.634 1 36.08 ? C3 PLM 407 R 1 HETATM 6 C C4 PLM . . . L 7 123.198 134.965 106.341 1 36.08 ? C4 PLM 407 R 1 HETATM 7 C C5 PLM . . . L 7 121.955 134.227 105.823 1 36.08 ? C5 PLM 407 R 1 HETATM 8 C C6 PLM . . . L 7 120.798 135.153 105.417 1 36.08 ? C6 PLM 407 R 1 HETATM 9 C C7 PLM . . . L 7 119.664 134.436 104.668 1 36.08 ? C7 PLM 407 R 1 HETATM 10 C C8 PLM . . . L 7 118.754 133.588 105.568 1 36.08 ? C8 PLM 407 R 1 HETATM 11 C C9 PLM . . . L 7 117.883 132.59 104.794 1 36.08 ? C9 PLM 407 R 1 HETATM 12 C CA PLM . . . L 7 116.86 131.848 105.665 1 36.08 ? CA PLM 407 R 1 HETATM 13 C CB PLM . . . L 7 116.411 130.507 105.069 1 36.08 ? CB PLM 407 R 1 HETATM 14 C CC PLM . . . L 7 115.223 129.861 105.795 1 36.08 ? CC PLM 407 R 1 HETATM 15 C CD PLM . . . L 7 113.929 130.687 105.733 1 36.08 ? CD PLM 407 R 1 HETATM 16 C CE PLM . . . L 7 112.667 129.846 105.486 1 36.08 ? CE PLM 407 R 1 HETATM 17 C CF PLM . . . L 7 112.261 129.754 104.007 1 36.08 ? CF PLM 407 R 1 HETATM 18 C CG PLM . . . L 7 113.419 129.378 103.072 1 36.08 ? CG PLM 407 R 1 HETATM 19 H H21 PLM . . . L 7 125.975 135.488 106.283 1 36.08 ? H21 PLM 407 R 1 HETATM 20 H H22 PLM . . . L 7 125.47 135.377 107.959 1 36.08 ? H22 PLM 407 R 1 HETATM 21 H H31 PLM . . . L 7 124.611 133.428 105.748 1 36.08 ? H31 PLM 407 R 1 HETATM 22 H H32 PLM . . . L 7 124.115 133.319 107.419 1 36.08 ? H32 PLM 407 R 1 HETATM 23 H H41 PLM . . . L 7 122.93 135.521 107.254 1 36.08 ? H41 PLM 407 R 1 HETATM 24 H H42 PLM . . . L 7 123.498 135.725 105.602 1 36.08 ? H42 PLM 407 R 1 HETATM 25 H H51 PLM . . . L 7 121.604 133.529 106.598 1 36.08 ? H51 PLM 407 R 1 HETATM 26 H H52 PLM . . . L 7 122.239 133.604 104.96 1 36.08 ? H52 PLM 407 R 1 HETATM 27 H H61 PLM . . . L 7 121.187 135.969 104.789 1 36.08 ? H61 PLM 407 R 1 HETATM 28 H H62 PLM . . . L 7 120.386 135.633 106.318 1 36.08 ? H62 PLM 407 R 1 HETATM 29 H H71 PLM . . . L 7 119.051 135.185 104.141 1 36.08 ? H71 PLM 407 R 1 HETATM 30 H H72 PLM . . . L 7 120.097 133.795 103.886 1 36.08 ? H72 PLM 407 R 1 HETATM 31 H H81 PLM . . . L 7 119.371 133.041 106.296 1 36.08 ? H81 PLM 407 R 1 HETATM 32 H H82 PLM . . . L 7 118.105 134.254 106.157 1 36.08 ? H82 PLM 407 R 1 HETATM 33 H H91 PLM . . . L 7 118.533 131.855 104.297 1 36.08 ? H91 PLM 407 R 1 HETATM 34 H H92 PLM . . . L 7 117.354 133.122 103.989 1 36.08 ? H92 PLM 407 R 1 HETATM 35 H HA1 PLM . . . L 7 117.29 131.675 106.662 1 36.08 ? HA1 PLM 407 R 1 HETATM 36 H HA2 PLM . . . L 7 115.982 132.491 105.818 1 36.08 ? HA2 PLM 407 R 1 HETATM 37 H HB1 PLM . . . L 7 116.154 130.651 104.01 1 36.08 ? HB1 PLM 407 R 1 HETATM 38 H HB2 PLM . . . L 7 117.258 129.808 105.083 1 36.08 ? HB2 PLM 407 R 1 HETATM 39 H HC1 PLM . . . L 7 115.492 129.693 106.845 1 36.08 ? HC1 PLM 407 R 1 HETATM 40 H HC2 PLM . . . L 7 115.038 128.865 105.367 1 36.08 ? HC2 PLM 407 R 1 HETATM 41 H HD1 PLM . . . L 7 113.813 131.245 106.675 1 36.08 ? HD1 PLM 407 R 1 HETATM 42 H HD2 PLM . . . L 7 114.021 131.443 104.941 1 36.08 ? HD2 PLM 407 R 1 HETATM 43 H HE1 PLM . . . L 7 112.822 128.83 105.882 1 36.08 ? HE1 PLM 407 R 1 HETATM 44 H HE2 PLM . . . L 7 111.831 130.272 106.061 1 36.08 ? HE2 PLM 407 R 1 HETATM 45 H HF1 PLM . . . L 7 111.836 130.717 103.689 1 36.08 ? HF1 PLM 407 R 1 HETATM 46 H HF2 PLM . . . L 7 111.454 129.015 103.901 1 36.08 ? HF2 PLM 407 R 1 HETATM 47 H HG1 PLM . . . L 7 114.174 130.169 103.029 1 36.08 ? HG1 PLM 407 R 1 HETATM 48 H HG2 PLM . . . L 7 113.062 129.206 102.05 1 36.08 ? HG2 PLM 407 R 1 HETATM 49 H HG3 PLM . . . L 7 113.918 128.459 103.407 1 36.08 ? HG3 PLM 407 R 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 49 #