data_7XUL
#
_model_server_result.job_id            SgLrhdsKUx6wevW8cHDOjA 
_model_server_result.datetime_utc      '2024-11-09 23:17:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xul 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":804}' 
#
_entry.id    7XUL 
#
_exptl.entry_id    7XUL 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7XUL 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XUL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 406 n n 
CBA CAB Y01 sing 407 n n 
CBA CAN Y01 sing 408 n n 
CAN CAJ Y01 sing 409 n n 
CAJ CAO Y01 sing 410 n n 
CAO CBB Y01 sing 411 n n 
CBB CAC Y01 sing 412 n n 
CBB CBE Y01 sing 413 n n 
CBE CAP Y01 sing 414 n n 
CBE CBI Y01 sing 415 n n 
CAP CAQ Y01 sing 416 n n 
CAQ CBG Y01 sing 417 n n 
CBG CBI Y01 sing 418 n n 
CBG CBD Y01 sing 419 n n 
CBI CAE Y01 sing 420 n n 
CBI CAU Y01 sing 421 n n 
CAU CAS Y01 sing 422 n n 
CAS CBF Y01 sing 423 n n 
CBF CBD Y01 sing 424 n n 
CBF CBH Y01 sing 425 n n 
CBD CAK Y01 sing 426 n n 
CAK CAI Y01 sing 427 n n 
CAI CAZ Y01 doub 428 n n 
CAZ CAV Y01 sing 429 n n 
CAZ CBH Y01 sing 430 n n 
CAV CBC Y01 sing 431 n n 
CBH CAD Y01 sing 432 n n 
CBH CAT Y01 sing 433 n n 
CAT CAR Y01 sing 434 n n 
CAR CBC Y01 sing 435 n n 
CBC OAW Y01 sing 436 n n 
OAW CAY Y01 sing 437 n n 
CAY OAG Y01 doub 438 n n 
CAY CAM Y01 sing 439 n n 
CAM CAL Y01 sing 440 n n 
CAL CAX Y01 sing 441 n n 
CAX OAH Y01 sing 442 n n 
CAX OAF Y01 doub 443 n n 
CAA HAA1 Y01 sing 444 n n 
CAA HAA2 Y01 sing 445 n n 
CAA HAA3 Y01 sing 446 n n 
CBA HBA Y01 sing 447 n n 
CAB HAB1 Y01 sing 448 n n 
CAB HAB2 Y01 sing 449 n n 
CAB HAB3 Y01 sing 450 n n 
CAN HAN1 Y01 sing 451 n n 
CAN HAN2 Y01 sing 452 n n 
CAJ HAJ1 Y01 sing 453 n n 
CAJ HAJ2 Y01 sing 454 n n 
CAO HAO1 Y01 sing 455 n n 
CAO HAO2 Y01 sing 456 n n 
CBB HBB Y01 sing 457 n n 
CAC HAC1 Y01 sing 458 n n 
CAC HAC2 Y01 sing 459 n n 
CAC HAC3 Y01 sing 460 n n 
CBE HBE Y01 sing 461 n n 
CAP HAP1 Y01 sing 462 n n 
CAP HAP2 Y01 sing 463 n n 
CAQ HAQ1 Y01 sing 464 n n 
CAQ HAQ2 Y01 sing 465 n n 
CBG HBG Y01 sing 466 n n 
CBD HBD Y01 sing 467 n n 
CAE HAE1 Y01 sing 468 n n 
CAE HAE2 Y01 sing 469 n n 
CAE HAE3 Y01 sing 470 n n 
CAU HAU1 Y01 sing 471 n n 
CAU HAU2 Y01 sing 472 n n 
CAS HAS1 Y01 sing 473 n n 
CAS HAS2 Y01 sing 474 n n 
CBF HBF Y01 sing 475 n n 
CAK HAK1 Y01 sing 476 n n 
CAK HAK2 Y01 sing 477 n n 
CAI HAI Y01 sing 478 n n 
CAV HAV1 Y01 sing 479 n n 
CAV HAV2 Y01 sing 480 n n 
CBC HBC Y01 sing 481 n n 
CAD HAD1 Y01 sing 482 n n 
CAD HAD2 Y01 sing 483 n n 
CAD HAD3 Y01 sing 484 n n 
CAT HAT1 Y01 sing 485 n n 
CAT HAT2 Y01 sing 486 n n 
CAR HAR1 Y01 sing 487 n n 
CAR HAR2 Y01 sing 488 n n 
CAM HAM1 Y01 sing 489 n n 
CAM HAM2 Y01 sing 490 n n 
CAL HAL1 Y01 sing 491 n n 
CAL HAL2 Y01 sing 492 n n 
OAH HAH Y01 sing 493 n n 
#
_atom_sites.entry_id                     7XUL 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 I2U A 1 801 801 I2U LIG . 
D 3 Y01 A 1 802 901 Y01 Y01 . 
E 3 Y01 A 1 803 902 Y01 Y01 . 
F 3 Y01 A 1 804 903 Y01 Y01 . 
G 3 Y01 A 1 805 904 Y01 Y01 . 
H 3 Y01 B 1 801 903 Y01 Y01 . 
I 3 Y01 B 1 802 904 Y01 Y01 . 
J 2 I2U B 1 803 801 I2U LIG . 
K 3 Y01 B 1 804 901 Y01 Y01 . 
L 3 Y01 B 1 805 902 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . F 3 164.537 164.209 170.544 1 141.32 ? CAA Y01 804 A 1 
HETATM 2 C CBA Y01 . . . F 3 163.659 162.979 170.36 1 141.32 ? CBA Y01 804 A 1 
HETATM 3 C CAB Y01 . . . F 3 162.528 163.267 169.384 1 141.32 ? CAB Y01 804 A 1 
HETATM 4 C CAN Y01 . . . F 3 163.133 162.423 171.695 1 141.32 ? CAN Y01 804 A 1 
HETATM 5 C CAJ Y01 . . . F 3 161.845 163.019 172.23 1 141.32 ? CAJ Y01 804 A 1 
HETATM 6 C CAO Y01 . . . F 3 162.029 164.193 173.174 1 141.32 ? CAO Y01 804 A 1 
HETATM 7 C CBB Y01 . . . F 3 162.743 163.889 174.502 1 141.32 ? CBB Y01 804 A 1 
HETATM 8 C CAC Y01 . . . F 3 164.112 164.567 174.511 1 141.32 ? CAC Y01 804 A 1 
HETATM 9 C CBE Y01 . . . F 3 161.845 164.275 175.698 1 141.32 ? CBE Y01 804 A 1 
HETATM 10 C CAP Y01 . . . F 3 160.363 163.851 175.476 1 141.32 ? CAP Y01 804 A 1 
HETATM 11 C CAQ Y01 . . . F 3 159.852 163.275 176.806 1 141.32 ? CAQ Y01 804 A 1 
HETATM 12 C CBG Y01 . . . F 3 160.789 163.932 177.808 1 141.32 ? CBG Y01 804 A 1 
HETATM 13 C CBI Y01 . . . F 3 162.174 163.777 177.144 1 141.32 ? CBI Y01 804 A 1 
HETATM 14 C CAE Y01 . . . F 3 162.628 162.309 177.088 1 141.32 ? CAE Y01 804 A 1 
HETATM 15 C CAU Y01 . . . F 3 163.149 164.619 177.978 1 141.32 ? CAU Y01 804 A 1 
HETATM 16 C CAS Y01 . . . F 3 163.147 164.215 179.458 1 141.32 ? CAS Y01 804 A 1 
HETATM 17 C CBF Y01 . . . F 3 161.752 164.292 180.099 1 141.32 ? CBF Y01 804 A 1 
HETATM 18 C CBD Y01 . . . F 3 160.708 163.518 179.271 1 141.32 ? CBD Y01 804 A 1 
HETATM 19 C CAK Y01 . . . F 3 159.309 163.781 179.821 1 141.32 ? CAK Y01 804 A 1 
HETATM 20 C CAI Y01 . . . F 3 159.259 163.758 181.316 1 141.32 ? CAI Y01 804 A 1 
HETATM 21 C CAZ Y01 . . . F 3 160.321 163.723 182.107 1 141.32 ? CAZ Y01 804 A 1 
HETATM 22 C CAV Y01 . . . F 3 160.161 163.571 183.606 1 141.32 ? CAV Y01 804 A 1 
HETATM 23 C CBH Y01 . . . F 3 161.753 163.855 181.592 1 141.32 ? CBH Y01 804 A 1 
HETATM 24 C CAD Y01 . . . F 3 162.453 162.496 181.77 1 141.32 ? CAD Y01 804 A 1 
HETATM 25 C CAT Y01 . . . F 3 162.467 164.928 182.446 1 141.32 ? CAT Y01 804 A 1 
HETATM 26 C CAR Y01 . . . F 3 162.318 164.702 183.953 1 141.32 ? CAR Y01 804 A 1 
HETATM 27 C CBC Y01 . . . F 3 160.869 164.67 184.365 1 141.32 ? CBC Y01 804 A 1 
HETATM 28 O OAW Y01 . . . F 3 160.75 164.323 185.782 1 141.32 ? OAW Y01 804 A 1 
HETATM 29 C CAY Y01 . . . F 3 160.959 165.226 186.754 1 141.32 ? CAY Y01 804 A 1 
HETATM 30 O OAG Y01 . . . F 3 161.396 164.931 187.828 1 141.32 ? OAG Y01 804 A 1 
HETATM 31 C CAM Y01 . . . F 3 160.501 166.625 186.404 1 141.32 ? CAM Y01 804 A 1 
HETATM 32 C CAL Y01 . . . F 3 161.431 167.765 186.786 1 141.32 ? CAL Y01 804 A 1 
HETATM 33 C CAX Y01 . . . F 3 162.789 167.776 186.103 1 141.32 ? CAX Y01 804 A 1 
HETATM 34 O OAH Y01 . . . F 3 163.567 166.823 186.308 1 141.32 ? OAH Y01 804 A 1 
HETATM 35 O OAF Y01 . . . F 3 163.072 168.748 185.374 1 141.32 ? OAF Y01 804 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           35 
#