data_7XVH # _model_server_result.job_id ugVdLHy4r6gly6ZD31oTtA _model_server_result.datetime_utc '2024-10-22 06:02:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xvh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7XVH # _exptl.entry_id 7XVH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 418.442 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.3 _cell.angle_gamma 90 _cell.entry_id 7XVH _cell.length_a 76.62 _cell.length_b 83.89 _cell.length_c 61.22 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XVH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_557 -x,y,-z+2 -1 0 0 0 1 0 0 0 -1 -21.892543 0 120.466884 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 373 A CYS 401 1_555 A SG CYS 388 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 A NE2 HIS 198 A HIS 226 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc2 A NE2 HIS 280 A HIS 308 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc3 A OE1 GLU 366 A GLU 394 1_555 B CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc4 B CO CO . A CO 501 1_555 C O9 92X . A 92X 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc5 B CO CO . A CO 501 1_555 C O11 92X . A 92X 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc6 B CO CO . A CO 501 1_555 D O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? # _chem_comp.formula 'C24 H22 N2 O5' _chem_comp.formula_weight 418.442 _chem_comp.id 92X _chem_comp.mon_nstd_flag . _chem_comp.name 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 92X sing 1 n n C1 C6 92X sing 2 n n C2 C3 92X sing 3 n n C3 C4 92X sing 4 n n C6 O7 92X sing 5 n n C6 C5 92X doub 6 n n C4 C5 92X sing 7 n n C4 O9 92X doub 8 n n C31 C30 92X sing 9 n n C5 C8 92X sing 10 n n C29 C30 92X doub 11 n y C29 C28 92X sing 12 n y C17 C16 92X sing 13 n n C30 C21 92X sing 14 n y O20 C18 92X doub 15 n n C28 C27 92X doub 16 n y C8 C10 92X sing 17 n n C8 O11 92X doub 18 n n C16 C10 92X doub 19 n y C16 C15 92X sing 20 n y C18 C15 92X sing 21 n n C18 N19 92X sing 22 n n C21 N19 92X sing 23 n n C21 C26 92X doub 24 n y C27 C26 92X sing 25 n y C10 C12 92X sing 26 n y C15 C14 92X doub 27 n y N19 C22 92X sing 28 n n C12 C13 92X doub 29 n y C14 C13 92X sing 30 n y C14 N24 92X sing 31 n n C22 N24 92X sing 32 n n C22 O23 92X doub 33 n n N24 C25 92X sing 34 n n C13 H1 92X sing 35 n n C17 H2 92X sing 36 n n C17 H3 92X sing 37 n n C17 H4 92X sing 38 n n C26 H5 92X sing 39 n n C28 H6 92X sing 40 n n C1 H7 92X sing 41 n n C1 H8 92X sing 42 n n C2 H9 92X sing 43 n n C2 H10 92X sing 44 n n C3 H11 92X sing 45 n n C3 H12 92X sing 46 n n O7 H13 92X sing 47 n n C12 H14 92X sing 48 n n C25 H15 92X sing 49 n n C25 H16 92X sing 50 n n C25 H17 92X sing 51 n n C27 H18 92X sing 52 n n C29 H19 92X sing 53 n n C31 H20 92X sing 54 n n C31 H21 92X sing 55 n n C31 H22 92X sing 56 n n # _atom_sites.entry_id 7XVH _atom_sites.fract_transf_matrix[1][1] 0.013051 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002372 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01192 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 501 1 CO CO . C 3 92X A 1 502 501 92X LIG . D 4 HOH A 1 601 64 HOH HOH . D 4 HOH A 2 602 31 HOH HOH . D 4 HOH A 3 603 57 HOH HOH . D 4 HOH A 4 604 75 HOH HOH . D 4 HOH A 5 605 43 HOH HOH . D 4 HOH A 6 606 81 HOH HOH . D 4 HOH A 7 607 27 HOH HOH . D 4 HOH A 8 608 59 HOH HOH . D 4 HOH A 9 609 51 HOH HOH . D 4 HOH A 10 610 91 HOH HOH . D 4 HOH A 11 611 38 HOH HOH . D 4 HOH A 12 612 35 HOH HOH . D 4 HOH A 13 613 61 HOH HOH . D 4 HOH A 14 614 95 HOH HOH . D 4 HOH A 15 615 30 HOH HOH . D 4 HOH A 16 616 77 HOH HOH . D 4 HOH A 17 617 13 HOH HOH . D 4 HOH A 18 618 103 HOH HOH . D 4 HOH A 19 619 102 HOH HOH . D 4 HOH A 20 620 20 HOH HOH . D 4 HOH A 21 621 97 HOH HOH . D 4 HOH A 22 622 1 HOH HOH . D 4 HOH A 23 623 79 HOH HOH . D 4 HOH A 24 624 52 HOH HOH . D 4 HOH A 25 625 85 HOH HOH . D 4 HOH A 26 626 26 HOH HOH . D 4 HOH A 27 627 6 HOH HOH . D 4 HOH A 28 628 21 HOH HOH . D 4 HOH A 29 629 4 HOH HOH . D 4 HOH A 30 630 16 HOH HOH . D 4 HOH A 31 631 18 HOH HOH . D 4 HOH A 32 632 62 HOH HOH . D 4 HOH A 33 633 7 HOH HOH . D 4 HOH A 34 634 98 HOH HOH . D 4 HOH A 35 635 54 HOH HOH . D 4 HOH A 36 636 100 HOH HOH . D 4 HOH A 37 637 69 HOH HOH . D 4 HOH A 38 638 41 HOH HOH . D 4 HOH A 39 639 22 HOH HOH . D 4 HOH A 40 640 45 HOH HOH . D 4 HOH A 41 641 74 HOH HOH . D 4 HOH A 42 642 39 HOH HOH . D 4 HOH A 43 643 15 HOH HOH . D 4 HOH A 44 644 25 HOH HOH . D 4 HOH A 45 645 5 HOH HOH . D 4 HOH A 46 646 28 HOH HOH . D 4 HOH A 47 647 23 HOH HOH . D 4 HOH A 48 648 56 HOH HOH . D 4 HOH A 49 649 60 HOH HOH . D 4 HOH A 50 650 9 HOH HOH . D 4 HOH A 51 651 10 HOH HOH . D 4 HOH A 52 652 96 HOH HOH . D 4 HOH A 53 653 76 HOH HOH . D 4 HOH A 54 654 34 HOH HOH . D 4 HOH A 55 655 11 HOH HOH . D 4 HOH A 56 656 40 HOH HOH . D 4 HOH A 57 657 37 HOH HOH . D 4 HOH A 58 658 68 HOH HOH . D 4 HOH A 59 659 3 HOH HOH . D 4 HOH A 60 660 65 HOH HOH . D 4 HOH A 61 661 53 HOH HOH . D 4 HOH A 62 662 87 HOH HOH . D 4 HOH A 63 663 66 HOH HOH . D 4 HOH A 64 664 48 HOH HOH . D 4 HOH A 65 665 99 HOH HOH . D 4 HOH A 66 666 36 HOH HOH . D 4 HOH A 67 667 14 HOH HOH . D 4 HOH A 68 668 49 HOH HOH . D 4 HOH A 69 669 50 HOH HOH . D 4 HOH A 70 670 29 HOH HOH . D 4 HOH A 71 671 73 HOH HOH . D 4 HOH A 72 672 12 HOH HOH . D 4 HOH A 73 673 24 HOH HOH . D 4 HOH A 74 674 44 HOH HOH . D 4 HOH A 75 675 46 HOH HOH . D 4 HOH A 76 676 19 HOH HOH . D 4 HOH A 77 677 92 HOH HOH . D 4 HOH A 78 678 70 HOH HOH . D 4 HOH A 79 679 93 HOH HOH . D 4 HOH A 80 680 83 HOH HOH . D 4 HOH A 81 681 55 HOH HOH . D 4 HOH A 82 682 101 HOH HOH . D 4 HOH A 83 683 42 HOH HOH . D 4 HOH A 84 684 63 HOH HOH . D 4 HOH A 85 685 90 HOH HOH . D 4 HOH A 86 686 71 HOH HOH . D 4 HOH A 87 687 8 HOH HOH . D 4 HOH A 88 688 17 HOH HOH . D 4 HOH A 89 689 58 HOH HOH . D 4 HOH A 90 690 33 HOH HOH . D 4 HOH A 91 691 86 HOH HOH . D 4 HOH A 92 692 72 HOH HOH . D 4 HOH A 93 693 2 HOH HOH . D 4 HOH A 94 694 94 HOH HOH . D 4 HOH A 95 695 80 HOH HOH . D 4 HOH A 96 696 82 HOH HOH . D 4 HOH A 97 697 88 HOH HOH . D 4 HOH A 98 698 78 HOH HOH . D 4 HOH A 99 699 32 HOH HOH . D 4 HOH A 100 700 67 HOH HOH . D 4 HOH A 101 701 105 HOH HOH . D 4 HOH A 102 702 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 92X . . . C 3 2.353 -2.853 82.306 1 40.42 ? C10 92X 502 A 1 HETATM 2 C C13 92X . . . C 3 1.724 -1.533 84.17 1 45.82 ? C13 92X 502 A 1 HETATM 3 C C15 92X . . . C 3 0.055 -2.874 83.063 1 45.28 ? C15 92X 502 A 1 HETATM 4 C C17 92X . . . C 3 0.799 -4.3 81.014 1 40.74 ? C17 92X 502 A 1 HETATM 5 C C21 92X . . . C 3 -3.525 -3.22 83.809 1 52.67 ? C21 92X 502 A 1 HETATM 6 C C22 92X . . . C 3 -1.745 -1.923 84.86 1 52.68 ? C22 92X 502 A 1 HETATM 7 C C26 92X . . . C 3 -4.284 -2.555 82.859 1 48.75 ? C26 92X 502 A 1 HETATM 8 C C28 92X . . . C 3 -6.209 -3.85 83.458 1 53 ? C28 92X 502 A 1 HETATM 9 C C1 92X . . . C 3 5.196 -6.333 83.104 1 40.57 ? C1 92X 502 A 1 HETATM 10 C C2 92X . . . C 3 6.597 -5.808 82.798 1 40.26 ? C2 92X 502 A 1 HETATM 11 C C3 92X . . . C 3 6.747 -5.567 81.301 1 38.79 ? C3 92X 502 A 1 HETATM 12 C C4 92X . . . C 3 5.641 -4.64 80.814 1 40.85 ? C4 92X 502 A 1 HETATM 13 C C5 92X . . . C 3 4.382 -4.472 81.665 1 36.76 ? C5 92X 502 A 1 HETATM 14 C C6 92X . . . C 3 4.133 -5.318 82.662 1 42.27 ? C6 92X 502 A 1 HETATM 15 O O7 92X . . . C 3 2.834 -5.483 83.175 1 45 ? O7 92X 502 A 1 HETATM 16 C C8 92X . . . C 3 3.457 -3.297 81.341 1 39.57 ? C8 92X 502 A 1 HETATM 17 O O9 92X . . . C 3 5.778 -4.044 79.793 1 37.6 ? O9 92X 502 A 1 HETATM 18 O O11 92X . . . C 3 3.607 -2.68 80.327 1 36.06 ? O11 92X 502 A 1 HETATM 19 C C12 92X . . . C 3 2.689 -1.971 83.302 1 42.75 ? C12 92X 502 A 1 HETATM 20 C C14 92X . . . C 3 0.416 -1.984 84.049 1 46.84 ? C14 92X 502 A 1 HETATM 21 C C16 92X . . . C 3 1.052 -3.314 82.165 1 43.82 ? C16 92X 502 A 1 HETATM 22 C C18 92X . . . C 3 -1.265 -3.272 83.016 1 50.24 ? C18 92X 502 A 1 HETATM 23 N N19 92X . . . C 3 -2.132 -2.813 83.908 1 51.14 ? N19 92X 502 A 1 HETATM 24 O O20 92X . . . C 3 -1.701 -4.048 82.223 1 47.36 ? O20 92X 502 A 1 HETATM 25 O O23 92X . . . C 3 -2.521 -1.502 85.652 1 54.73 ? O23 92X 502 A 1 HETATM 26 N N24 92X . . . C 3 -0.462 -1.526 84.917 1 47.48 ? N24 92X 502 A 1 HETATM 27 C C25 92X . . . C 3 -0.055 -0.595 85.951 1 52.91 ? C25 92X 502 A 1 HETATM 28 C C27 92X . . . C 3 -5.618 -2.867 82.684 1 54.55 ? C27 92X 502 A 1 HETATM 29 C C29 92X . . . C 3 -5.455 -4.52 84.406 1 55.09 ? C29 92X 502 A 1 HETATM 30 C C30 92X . . . C 3 -4.115 -4.21 84.584 1 52.49 ? C30 92X 502 A 1 HETATM 31 C C31 92X . . . C 3 -3.316 -4.965 85.635 1 55.19 ? C31 92X 502 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 31 #