data_7XW5 # _model_server_result.job_id M1pV66V3AFfS8rgWuZW6tQ _model_server_result.datetime_utc '2025-08-31 12:14:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":813}' # _entry.id 7XW5 # _exptl.entry_id 7XW5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 M N N ? 10 N N N ? 10 O N N ? 10 P N N ? 10 Q N N ? 10 R N N ? 10 S N N ? 10 T N N ? 10 U N N ? 10 V N N ? 10 W N N ? 10 X N N ? 10 Y N N ? 10 Z N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 N CYS 22 1_555 D SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 D SG CYS 99 N CYS 99 1_555 D SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 E SG CYS 11 R CYS 31 1_555 E SG CYS 21 R CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf4 E SG CYS 263 R CYS 283 1_555 E SG CYS 328 R CYS 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf5 E SG CYS 264 R CYS 284 1_555 E SG CYS 338 R CYS 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 E SG CYS 424 R CYS 494 1_555 E SG CYS 499 R CYS 569 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 F SG CYS 7 X CYS 7 1_555 F SG CYS 31 X CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf8 F SG CYS 10 X CYS 10 1_555 F SG CYS 60 X CYS 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf9 F SG CYS 28 X CYS 28 1_555 F SG CYS 82 X CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf10 F SG CYS 32 X CYS 32 1_555 F SG CYS 84 X CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf11 F SG CYS 59 X CYS 59 1_555 F SG CYS 87 X CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf12 G SG CYS 2 Y CYS 22 1_555 G SG CYS 52 Y CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf13 G SG CYS 16 Y CYS 36 1_555 G SG CYS 67 Y CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf14 G SG CYS 19 Y CYS 39 1_555 G SG CYS 105 Y CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf15 G SG CYS 27 Y CYS 47 1_555 G SG CYS 83 Y CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf16 G SG CYS 31 Y CYS 51 1_555 G SG CYS 85 Y CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf17 G SG CYS 88 Y CYS 108 1_555 G SG CYS 95 Y CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? covale ? covale1 E ND2 ASN 57 R ASN 77 1_555 K C1 NAG . R NAG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale2 E ND2 ASN 79 R ASN 99 1_555 J C1 NAG . R NAG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale3 E ND2 ASN 157 R ASN 177 1_555 I C1 NAG . R NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale4 E ND2 ASN 178 R ASN 198 1_555 H C1 NAG . R NAG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale5 F ND2 ASN 52 X ASN 52 1_555 GA C1 NAG . X NAG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale6 F ND2 ASN 78 X ASN 78 1_555 FA C1 NAG . X NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale7 G ND2 ASN 23 Y ASN 43 1_555 HA C1 NAG . Y NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7XW5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 8 NAG R 1 801 801 NAG NAG . I 8 NAG R 1 802 802 NAG NAG . J 8 NAG R 1 803 803 NAG NAG . K 8 NAG R 1 804 804 NAG NAG . L 9 HOI R 1 805 805 HOI HOI . M 10 CLR R 1 806 806 CLR CLR . N 10 CLR R 1 807 807 CLR CLR . O 10 CLR R 1 808 808 CLR CLR . P 10 CLR R 1 809 809 CLR CLR . Q 10 CLR R 1 810 810 CLR CLR . R 10 CLR R 1 811 811 CLR CLR . S 10 CLR R 1 812 812 CLR CLR . T 10 CLR R 1 813 813 CLR CLR . U 10 CLR R 1 814 814 CLR CLR . V 10 CLR R 1 815 815 CLR CLR . W 10 CLR R 1 816 816 CLR CLR . X 10 CLR R 1 817 817 CLR CLR . Y 10 CLR R 1 818 818 CLR CLR . Z 10 CLR R 1 819 819 CLR CLR . AA 11 PLM R 1 820 820 PLM PLM . BA 11 PLM R 1 821 821 PLM PLM . CA 11 PLM R 1 822 822 PLM PLM . DA 11 PLM R 1 823 823 PLM PLM . EA 11 PLM R 1 824 824 PLM PLM . FA 8 NAG X 1 201 201 NAG NAG . GA 8 NAG X 1 202 202 NAG NAG . HA 8 NAG Y 1 201 201 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . T 10 137.467 175.492 167.701 1 84.51 ? C1 CLR 813 R 1 HETATM 2 C C2 CLR . . . T 10 136.877 175.522 169.131 1 86.07 ? C2 CLR 813 R 1 HETATM 3 C C3 CLR . . . T 10 135.552 174.739 169.2 1 85.13 ? C3 CLR 813 R 1 HETATM 4 C C4 CLR . . . T 10 135.735 173.293 168.698 1 85.11 ? C4 CLR 813 R 1 HETATM 5 C C5 CLR . . . T 10 136.374 173.233 167.311 1 85.66 ? C5 CLR 813 R 1 HETATM 6 C C6 CLR . . . T 10 135.806 172.512 166.335 1 84.82 ? C6 CLR 813 R 1 HETATM 7 C C7 CLR . . . T 10 136.358 172.351 164.937 1 86.02 ? C7 CLR 813 R 1 HETATM 8 C C8 CLR . . . T 10 137.831 172.806 164.833 1 87.03 ? C8 CLR 813 R 1 HETATM 9 C C9 CLR . . . T 10 138.019 174.166 165.581 1 86.57 ? C9 CLR 813 R 1 HETATM 10 C C10 CLR . . . T 10 137.67 174.05 167.124 1 85.79 ? C10 CLR 813 R 1 HETATM 11 C C11 CLR . . . T 10 139.409 174.834 165.291 1 84.95 ? C11 CLR 813 R 1 HETATM 12 C C12 CLR . . . T 10 139.847 174.812 163.799 1 86.74 ? C12 CLR 813 R 1 HETATM 13 C C13 CLR . . . T 10 139.768 173.382 163.193 1 88.88 ? C13 CLR 813 R 1 HETATM 14 C C14 CLR . . . T 10 138.293 172.94 163.356 1 87.4 ? C14 CLR 813 R 1 HETATM 15 C C15 CLR . . . T 10 138.128 171.732 162.43 1 84.89 ? C15 CLR 813 R 1 HETATM 16 C C16 CLR . . . T 10 139.116 172 161.27 1 84.25 ? C16 CLR 813 R 1 HETATM 17 C C17 CLR . . . T 10 139.944 173.274 161.635 1 85.67 ? C17 CLR 813 R 1 HETATM 18 C C18 CLR . . . T 10 140.776 172.419 163.913 1 85.06 ? C18 CLR 813 R 1 HETATM 19 C C19 CLR . . . T 10 138.811 173.339 167.914 1 82.91 ? C19 CLR 813 R 1 HETATM 20 C C20 CLR . . . T 10 141.415 173.251 161.052 1 85.16 ? C20 CLR 813 R 1 HETATM 21 C C21 CLR . . . T 10 142.237 174.498 161.488 1 82.05 ? C21 CLR 813 R 1 HETATM 22 C C22 CLR . . . T 10 141.451 173.168 159.486 1 85.6 ? C22 CLR 813 R 1 HETATM 23 C C23 CLR . . . T 10 141.333 171.74 158.895 1 85.4 ? C23 CLR 813 R 1 HETATM 24 C C24 CLR . . . T 10 141.863 171.683 157.443 1 86.56 ? C24 CLR 813 R 1 HETATM 25 C C25 CLR . . . T 10 141.706 170.285 156.792 1 86.13 ? C25 CLR 813 R 1 HETATM 26 C C26 CLR . . . T 10 142.558 170.18 155.505 1 84.14 ? C26 CLR 813 R 1 HETATM 27 C C27 CLR . . . T 10 140.224 169.945 156.485 1 83.86 ? C27 CLR 813 R 1 HETATM 28 O O1 CLR . . . T 10 135.072 174.728 170.542 1 84.14 ? O1 CLR 813 R 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 65 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #