data_7XW6 # _model_server_result.job_id FpMKRENolJIYH77-h6TXNg _model_server_result.datetime_utc '2024-11-04 22:35:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":815}' # _entry.id 7XW6 # _exptl.entry_id 7XW6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 L N N ? 9 M N N ? 9 N N N ? 9 O N N ? 9 P N N ? 9 Q N N ? 9 R N N ? 9 S N N ? 9 T N N ? 9 U N N ? 9 V N N ? 9 W N N ? 9 X N N ? 9 Y N N ? 9 Z N N ? 9 AA N N ? 9 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 L CYS 23 1_555 D SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 E SG CYS 22 N CYS 22 1_555 E SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 E SG CYS 99 N CYS 99 1_555 E SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 F SG CYS 9 R CYS 29 1_555 F SG CYS 21 R CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 F SG CYS 263 R CYS 283 1_555 F SG CYS 328 R CYS 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 F SG CYS 264 R CYS 284 1_555 F SG CYS 338 R CYS 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf7 F SG CYS 424 R CYS 494 1_555 F SG CYS 499 R CYS 569 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf8 G SG CYS 22 Y CYS 22 1_555 G SG CYS 96 Y CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 F ND2 ASN 57 R ASN 77 1_555 K C1 NAG . R NAG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale2 F ND2 ASN 79 R ASN 99 1_555 J C1 NAG . R NAG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale3 F ND2 ASN 157 R ASN 177 1_555 I C1 NAG . R NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale4 F ND2 ASN 178 R ASN 198 1_555 H C1 NAG . R NAG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7XW6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 8 NAG R 1 801 701 NAG NAG . I 8 NAG R 1 802 702 NAG NAG . J 8 NAG R 1 803 703 NAG NAG . K 8 NAG R 1 804 704 NAG NAG . L 9 CLR R 1 805 705 CLR CLR . M 9 CLR R 1 806 706 CLR CLR . N 9 CLR R 1 807 1 CLR CLR . O 9 CLR R 1 808 2 CLR CLR . P 9 CLR R 1 809 3 CLR CLR . Q 9 CLR R 1 810 4 CLR CLR . R 9 CLR R 1 811 5 CLR CLR . S 9 CLR R 1 812 6 CLR CLR . T 9 CLR R 1 813 7 CLR CLR . U 9 CLR R 1 814 8 CLR CLR . V 9 CLR R 1 815 9 CLR CLR . W 9 CLR R 1 816 10 CLR CLR . X 9 CLR R 1 817 11 CLR CLR . Y 9 CLR R 1 818 12 CLR CLR . Z 9 CLR R 1 819 13 CLR CLR . AA 9 CLR R 1 820 14 CLR CLR . BA 9 CLR R 1 821 15 CLR CLR . CA 10 PLM R 1 822 16 PLM PLM . DA 10 PLM R 1 823 17 PLM PLM . EA 10 PLM R 1 824 18 PLM PLM . FA 10 PLM R 1 825 19 PLM PLM . GA 10 PLM R 1 826 20 PLM PLM . HA 11 HOI R 1 827 1 HOI LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . V 9 102.215 127.505 132.478 1 73.01 ? C1 CLR 815 R 1 HETATM 2 C C2 CLR . . . V 9 102.807 128.834 133.007 1 74.48 ? C2 CLR 815 R 1 HETATM 3 C C3 CLR . . . V 9 101.715 129.755 133.617 1 74.8 ? C3 CLR 815 R 1 HETATM 4 C C4 CLR . . . V 9 100.331 129.515 132.964 1 73.73 ? C4 CLR 815 R 1 HETATM 5 C C5 CLR . . . V 9 100.504 129.099 131.513 1 75.25 ? C5 CLR 815 R 1 HETATM 6 C C6 CLR . . . V 9 100.175 129.929 130.516 1 73.4 ? C6 CLR 815 R 1 HETATM 7 C C7 CLR . . . V 9 100.454 129.681 129.056 1 75 ? C7 CLR 815 R 1 HETATM 8 C C8 CLR . . . V 9 101 128.26 128.755 1 74.47 ? C8 CLR 815 R 1 HETATM 9 C C9 CLR . . . V 9 101.926 127.721 129.902 1 72.02 ? C9 CLR 815 R 1 HETATM 10 C C10 CLR . . . V 9 101.194 127.736 131.305 1 73.95 ? C10 CLR 815 R 1 HETATM 11 C C11 CLR . . . V 9 102.555 126.334 129.502 1 71.75 ? C11 CLR 815 R 1 HETATM 12 C C12 CLR . . . V 9 103.23 126.322 128.096 1 73.48 ? C12 CLR 815 R 1 HETATM 13 C C13 CLR . . . V 9 102.3 126.861 126.973 1 74.57 ? C13 CLR 815 R 1 HETATM 14 C C14 CLR . . . V 9 101.803 128.257 127.43 1 73.34 ? C14 CLR 815 R 1 HETATM 15 C C15 CLR . . . V 9 101.171 128.896 126.182 1 73.65 ? C15 CLR 815 R 1 HETATM 16 C C16 CLR . . . V 9 101.987 128.296 125.014 1 74.41 ? C16 CLR 815 R 1 HETATM 17 C C17 CLR . . . V 9 103.007 127.293 125.64 1 74.89 ? C17 CLR 815 R 1 HETATM 18 C C18 CLR . . . V 9 101.119 125.866 126.702 1 71.9 ? C18 CLR 815 R 1 HETATM 19 C C19 CLR . . . V 9 100.103 126.629 131.384 1 73.53 ? C19 CLR 815 R 1 HETATM 20 C C20 CLR . . . V 9 103.527 126.247 124.584 1 76.74 ? C20 CLR 815 R 1 HETATM 21 C C21 CLR . . . V 9 104.198 124.988 125.201 1 74.31 ? C21 CLR 815 R 1 HETATM 22 C C22 CLR . . . V 9 104.553 126.979 123.651 1 74.55 ? C22 CLR 815 R 1 HETATM 23 C C23 CLR . . . V 9 104.817 126.316 122.276 1 75.41 ? C23 CLR 815 R 1 HETATM 24 C C24 CLR . . . V 9 105.983 127.042 121.552 1 78.45 ? C24 CLR 815 R 1 HETATM 25 C C25 CLR . . . V 9 106.185 126.65 120.065 1 78.54 ? C25 CLR 815 R 1 HETATM 26 C C26 CLR . . . V 9 106.51 125.148 119.881 1 73.56 ? C26 CLR 815 R 1 HETATM 27 C C27 CLR . . . V 9 107.297 127.521 119.436 1 70.86 ? C27 CLR 815 R 1 HETATM 28 O O1 CLR . . . V 9 101.618 129.54 135.021 1 75.07 ? O1 CLR 815 R 1 HETATM 29 H H11 CLR . . . V 9 103.031 126.837 132.181 1 73.02 ? H11 CLR 815 R 1 HETATM 30 H H12 CLR . . . V 9 101.716 126.998 133.313 1 73.13 ? H12 CLR 815 R 1 HETATM 31 H H21 CLR . . . V 9 103.597 128.634 133.741 1 73.28 ? H21 CLR 815 R 1 HETATM 32 H H22 CLR . . . V 9 103.291 129.359 132.175 1 73.39 ? H22 CLR 815 R 1 HETATM 33 H H3 CLR . . . V 9 102.012 130.794 133.43 1 73.25 ? H3 CLR 815 R 1 HETATM 34 H H41 CLR . . . V 9 99.729 130.428 133.047 1 73.07 ? H41 CLR 815 R 1 HETATM 35 H H42 CLR . . . V 9 99.785 128.735 133.508 1 72.87 ? H42 CLR 815 R 1 HETATM 36 H H6 CLR . . . V 9 99.727 130.896 130.733 1 72.74 ? H6 CLR 815 R 1 HETATM 37 H H71 CLR . . . V 9 101.163 130.441 128.709 1 73.39 ? H71 CLR 815 R 1 HETATM 38 H H72 CLR . . . V 9 99.538 129.849 128.477 1 73.17 ? H72 CLR 815 R 1 HETATM 39 H H8 CLR . . . V 9 100.135 127.594 128.649 1 73.12 ? H8 CLR 815 R 1 HETATM 40 H H9 CLR . . . V 9 102.764 128.425 129.978 1 72.82 ? H9 CLR 815 R 1 HETATM 41 H H111 CLR . . . V 9 101.791 125.549 129.523 1 73.06 ? H111 CLR 815 R 1 HETATM 42 H H112 CLR . . . V 9 103.316 126.029 130.229 1 72.82 ? H112 CLR 815 R 1 HETATM 43 H H121 CLR . . . V 9 103.556 125.299 127.877 1 73.04 ? H121 CLR 815 R 1 HETATM 44 H H122 CLR . . . V 9 104.133 126.941 128.142 1 73.08 ? H122 CLR 815 R 1 HETATM 45 H H14 CLR . . . V 9 102.692 128.865 127.637 1 72.92 ? H14 CLR 815 R 1 HETATM 46 H H151 CLR . . . V 9 101.257 129.987 126.206 1 73.26 ? H151 CLR 815 R 1 HETATM 47 H H152 CLR . . . V 9 100.112 128.631 126.095 1 72.99 ? H152 CLR 815 R 1 HETATM 48 H H161 CLR . . . V 9 102.501 129.085 124.454 1 73.13 ? H161 CLR 815 R 1 HETATM 49 H H162 CLR . . . V 9 101.313 127.787 124.315 1 73.25 ? H162 CLR 815 R 1 HETATM 50 H H17 CLR . . . V 9 103.885 127.877 125.942 1 72.97 ? H17 CLR 815 R 1 HETATM 51 H H181 CLR . . . V 9 100.399 126.261 125.988 1 72.99 ? H181 CLR 815 R 1 HETATM 52 H H182 CLR . . . V 9 100.565 125.63 127.61 1 72.61 ? H182 CLR 815 R 1 HETATM 53 H H183 CLR . . . V 9 101.473 124.919 126.301 1 72.71 ? H183 CLR 815 R 1 HETATM 54 H H191 CLR . . . V 9 99.509 126.725 132.301 1 72.67 ? H191 CLR 815 R 1 HETATM 55 H H192 CLR . . . V 9 100.552 125.629 131.4 1 72.85 ? H192 CLR 815 R 1 HETATM 56 H H193 CLR . . . V 9 99.402 126.68 130.543 1 73.28 ? H193 CLR 815 R 1 HETATM 57 H H20 CLR . . . V 9 102.679 125.907 123.979 1 73.26 ? H20 CLR 815 R 1 HETATM 58 H H211 CLR . . . V 9 104.566 124.319 124.415 1 72.93 ? H211 CLR 815 R 1 HETATM 59 H H212 CLR . . . V 9 103.497 124.392 125.796 1 72.83 ? H212 CLR 815 R 1 HETATM 60 H H213 CLR . . . V 9 105.046 125.259 125.839 1 73.6 ? H213 CLR 815 R 1 HETATM 61 H H221 CLR . . . V 9 105.5 127.092 124.191 1 73.05 ? H221 CLR 815 R 1 HETATM 62 H H222 CLR . . . V 9 104.213 128.001 123.455 1 72.59 ? H222 CLR 815 R 1 HETATM 63 H H231 CLR . . . V 9 103.907 126.37 121.669 1 73.17 ? H231 CLR 815 R 1 HETATM 64 H H232 CLR . . . V 9 105.061 125.254 122.397 1 73.19 ? H232 CLR 815 R 1 HETATM 65 H H241 CLR . . . V 9 106.913 126.865 122.103 1 73.74 ? H241 CLR 815 R 1 HETATM 66 H H242 CLR . . . V 9 105.797 128.121 121.595 1 73.49 ? H242 CLR 815 R 1 HETATM 67 H H25 CLR . . . V 9 105.254 126.863 119.529 1 73.7 ? H25 CLR 815 R 1 HETATM 68 H H261 CLR . . . V 9 107.397 124.865 120.458 1 72.79 ? H261 CLR 815 R 1 HETATM 69 H H262 CLR . . . V 9 106.703 124.917 118.828 1 73.23 ? H262 CLR 815 R 1 HETATM 70 H H263 CLR . . . V 9 105.676 124.518 120.207 1 72.69 ? H263 CLR 815 R 1 HETATM 71 H H271 CLR . . . V 9 107.411 127.293 118.371 1 72.44 ? H271 CLR 815 R 1 HETATM 72 H H272 CLR . . . V 9 108.26 127.344 119.926 1 72.9 ? H272 CLR 815 R 1 HETATM 73 H H273 CLR . . . V 9 107.062 128.587 119.528 1 72.46 ? H273 CLR 815 R 1 HETATM 74 H H1 CLR . . . V 9 101.312 128.631 135.146 1 73.03 ? H1 CLR 815 R 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 74 #