data_7XW6 # _model_server_result.job_id Comd_FYlNss5T1BOUMenOw _model_server_result.datetime_utc '2024-11-04 22:41:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":821}' # _entry.id 7XW6 # _exptl.entry_id 7XW6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 L N N ? 9 M N N ? 9 N N N ? 9 O N N ? 9 P N N ? 9 Q N N ? 9 R N N ? 9 S N N ? 9 T N N ? 9 U N N ? 9 V N N ? 9 W N N ? 9 X N N ? 9 Y N N ? 9 Z N N ? 9 AA N N ? 9 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 L CYS 23 1_555 D SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 E SG CYS 22 N CYS 22 1_555 E SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 E SG CYS 99 N CYS 99 1_555 E SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 F SG CYS 9 R CYS 29 1_555 F SG CYS 21 R CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 F SG CYS 263 R CYS 283 1_555 F SG CYS 328 R CYS 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 F SG CYS 264 R CYS 284 1_555 F SG CYS 338 R CYS 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf7 F SG CYS 424 R CYS 494 1_555 F SG CYS 499 R CYS 569 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf8 G SG CYS 22 Y CYS 22 1_555 G SG CYS 96 Y CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 F ND2 ASN 57 R ASN 77 1_555 K C1 NAG . R NAG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale2 F ND2 ASN 79 R ASN 99 1_555 J C1 NAG . R NAG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale3 F ND2 ASN 157 R ASN 177 1_555 I C1 NAG . R NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale4 F ND2 ASN 178 R ASN 198 1_555 H C1 NAG . R NAG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7XW6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 8 NAG R 1 801 701 NAG NAG . I 8 NAG R 1 802 702 NAG NAG . J 8 NAG R 1 803 703 NAG NAG . K 8 NAG R 1 804 704 NAG NAG . L 9 CLR R 1 805 705 CLR CLR . M 9 CLR R 1 806 706 CLR CLR . N 9 CLR R 1 807 1 CLR CLR . O 9 CLR R 1 808 2 CLR CLR . P 9 CLR R 1 809 3 CLR CLR . Q 9 CLR R 1 810 4 CLR CLR . R 9 CLR R 1 811 5 CLR CLR . S 9 CLR R 1 812 6 CLR CLR . T 9 CLR R 1 813 7 CLR CLR . U 9 CLR R 1 814 8 CLR CLR . V 9 CLR R 1 815 9 CLR CLR . W 9 CLR R 1 816 10 CLR CLR . X 9 CLR R 1 817 11 CLR CLR . Y 9 CLR R 1 818 12 CLR CLR . Z 9 CLR R 1 819 13 CLR CLR . AA 9 CLR R 1 820 14 CLR CLR . BA 9 CLR R 1 821 15 CLR CLR . CA 10 PLM R 1 822 16 PLM PLM . DA 10 PLM R 1 823 17 PLM PLM . EA 10 PLM R 1 824 18 PLM PLM . FA 10 PLM R 1 825 19 PLM PLM . GA 10 PLM R 1 826 20 PLM PLM . HA 11 HOI R 1 827 1 HOI LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . BA 9 140.229 146.185 110.51 1 43.33 ? C1 CLR 821 R 1 HETATM 2 C C2 CLR . . . BA 9 141.148 145.998 109.28 1 39.12 ? C2 CLR 821 R 1 HETATM 3 C C3 CLR . . . BA 9 142.628 146.025 109.702 1 41.96 ? C3 CLR 821 R 1 HETATM 4 C C4 CLR . . . BA 9 142.91 144.953 110.776 1 43.16 ? C4 CLR 821 R 1 HETATM 5 C C5 CLR . . . BA 9 141.97 145.075 111.977 1 42.75 ? C5 CLR 821 R 1 HETATM 6 C C6 CLR . . . BA 9 142.461 145.13 113.224 1 40.81 ? C6 CLR 821 R 1 HETATM 7 C C7 CLR . . . BA 9 141.627 145.217 114.483 1 44.5 ? C7 CLR 821 R 1 HETATM 8 C C8 CLR . . . BA 9 140.137 144.88 114.23 1 39.8 ? C8 CLR 821 R 1 HETATM 9 C C9 CLR . . . BA 9 139.644 145.602 112.931 1 39.38 ? C9 CLR 821 R 1 HETATM 10 C C10 CLR . . . BA 9 140.462 145.138 111.652 1 42.27 ? C10 CLR 821 R 1 HETATM 11 C C11 CLR . . . BA 9 138.08 145.552 112.759 1 40.9 ? C11 CLR 821 R 1 HETATM 12 C C12 CLR . . . BA 9 137.283 145.896 114.053 1 40.94 ? C12 CLR 821 R 1 HETATM 13 C C13 CLR . . . BA 9 137.742 145.029 115.261 1 42.44 ? C13 CLR 821 R 1 HETATM 14 C C14 CLR . . . BA 9 139.255 145.304 115.437 1 43.97 ? C14 CLR 821 R 1 HETATM 15 C C15 CLR . . . BA 9 139.605 144.744 116.821 1 38.53 ? C15 CLR 821 R 1 HETATM 16 C C16 CLR . . . BA 9 138.333 145.012 117.658 1 37.51 ? C16 CLR 821 R 1 HETATM 17 C C17 CLR . . . BA 9 137.206 145.473 116.672 1 39.39 ? C17 CLR 821 R 1 HETATM 18 C C18 CLR . . . BA 9 137.433 143.513 114.999 1 29.74 ? C18 CLR 821 R 1 HETATM 19 C C19 CLR . . . BA 9 140.009 143.72 111.178 1 31.44 ? C19 CLR 821 R 1 HETATM 20 C C20 CLR . . . BA 9 135.778 144.995 117.135 1 35.7 ? C20 CLR 821 R 1 HETATM 21 C C21 CLR . . . BA 9 134.663 145.368 116.119 1 38.48 ? C21 CLR 821 R 1 HETATM 22 C C22 CLR . . . BA 9 135.409 145.592 118.536 1 41.9 ? C22 CLR 821 R 1 HETATM 23 C C23 CLR . . . BA 9 134.397 144.729 119.335 1 39.65 ? C23 CLR 821 R 1 HETATM 24 C C24 CLR . . . BA 9 133.927 145.437 120.635 1 43.2 ? C24 CLR 821 R 1 HETATM 25 C C25 CLR . . . BA 9 133.113 144.511 121.588 1 48.65 ? C25 CLR 821 R 1 HETATM 26 C C26 CLR . . . BA 9 132.225 145.341 122.544 1 37.37 ? C26 CLR 821 R 1 HETATM 27 C C27 CLR . . . BA 9 134.038 143.576 122.405 1 40.76 ? C27 CLR 821 R 1 HETATM 28 O O1 CLR . . . BA 9 143.457 145.808 108.562 1 41.93 ? O1 CLR 821 R 1 HETATM 29 H H11 CLR . . . BA 9 140.397 147.194 110.906 1 37.56 ? H11 CLR 821 R 1 HETATM 30 H H12 CLR . . . BA 9 139.184 146.164 110.175 1 38.17 ? H12 CLR 821 R 1 HETATM 31 H H21 CLR . . . BA 9 140.913 145.054 108.774 1 37.4 ? H21 CLR 821 R 1 HETATM 32 H H22 CLR . . . BA 9 140.954 146.804 108.561 1 36.56 ? H22 CLR 821 R 1 HETATM 33 H H3 CLR . . . BA 9 142.847 147.008 110.136 1 37.5 ? H3 CLR 821 R 1 HETATM 34 H H41 CLR . . . BA 9 143.955 145.041 111.096 1 38.05 ? H41 CLR 821 R 1 HETATM 35 H H42 CLR . . . BA 9 142.808 143.959 110.323 1 37.65 ? H42 CLR 821 R 1 HETATM 36 H H6 CLR . . . BA 9 143.534 145.088 113.396 1 37.26 ? H6 CLR 821 R 1 HETATM 37 H H71 CLR . . . BA 9 141.727 146.221 114.912 1 38.33 ? H71 CLR 821 R 1 HETATM 38 H H72 CLR . . . BA 9 142.03 144.526 115.234 1 37.99 ? H72 CLR 821 R 1 HETATM 39 H H8 CLR . . . BA 9 140.073 143.793 114.097 1 36.95 ? H8 CLR 821 R 1 HETATM 40 H H9 CLR . . . BA 9 139.881 146.662 113.085 1 37.23 ? H9 CLR 821 R 1 HETATM 41 H H111 CLR . . . BA 9 137.759 144.559 112.421 1 37.99 ? H111 CLR 821 R 1 HETATM 42 H H112 CLR . . . BA 9 137.773 146.253 111.974 1 37.95 ? H112 CLR 821 R 1 HETATM 43 H H121 CLR . . . BA 9 136.214 145.753 113.852 1 37.74 ? H121 CLR 821 R 1 HETATM 44 H H122 CLR . . . BA 9 137.415 146.96 114.284 1 37.06 ? H122 CLR 821 R 1 HETATM 45 H H14 CLR . . . BA 9 139.376 146.391 115.526 1 37.99 ? H14 CLR 821 R 1 HETATM 46 H H151 CLR . . . BA 9 140.481 145.246 117.251 1 36.6 ? H151 CLR 821 R 1 HETATM 47 H H152 CLR . . . BA 9 139.814 143.668 116.765 1 37.38 ? H152 CLR 821 R 1 HETATM 48 H H161 CLR . . . BA 9 138.529 145.792 118.403 1 36.62 ? H161 CLR 821 R 1 HETATM 49 H H162 CLR . . . BA 9 138.043 144.101 118.197 1 38.03 ? H162 CLR 821 R 1 HETATM 50 H H17 CLR . . . BA 9 137.196 146.57 116.685 1 37.06 ? H17 CLR 821 R 1 HETATM 51 H H181 CLR . . . BA 9 136.382 143.37 114.72 1 36.21 ? H181 CLR 821 R 1 HETATM 52 H H182 CLR . . . BA 9 137.629 142.894 115.883 1 36.27 ? H182 CLR 821 R 1 HETATM 53 H H183 CLR . . . BA 9 138.024 143.098 114.173 1 36.39 ? H183 CLR 821 R 1 HETATM 54 H H191 CLR . . . BA 9 140.075 142.99 111.994 1 37.41 ? H191 CLR 821 R 1 HETATM 55 H H192 CLR . . . BA 9 140.629 143.342 110.356 1 35.53 ? H192 CLR 821 R 1 HETATM 56 H H193 CLR . . . BA 9 138.975 143.724 110.812 1 36.06 ? H193 CLR 821 R 1 HETATM 57 H H20 CLR . . . BA 9 135.798 143.903 117.233 1 36.54 ? H20 CLR 821 R 1 HETATM 58 H H211 CLR . . . BA 9 134.727 146.427 115.838 1 37.04 ? H211 CLR 821 R 1 HETATM 59 H H212 CLR . . . BA 9 133.665 145.194 116.54 1 37.44 ? H212 CLR 821 R 1 HETATM 60 H H213 CLR . . . BA 9 134.724 144.763 115.206 1 37.88 ? H213 CLR 821 R 1 HETATM 61 H H221 CLR . . . BA 9 135.005 146.603 118.404 1 37.44 ? H221 CLR 821 R 1 HETATM 62 H H222 CLR . . . BA 9 136.304 145.709 119.159 1 38.32 ? H222 CLR 821 R 1 HETATM 63 H H231 CLR . . . BA 9 134.863 143.766 119.577 1 36.75 ? H231 CLR 821 R 1 HETATM 64 H H232 CLR . . . BA 9 133.521 144.507 118.714 1 37.18 ? H232 CLR 821 R 1 HETATM 65 H H241 CLR . . . BA 9 133.312 146.299 120.349 1 37.37 ? H241 CLR 821 R 1 HETATM 66 H H242 CLR . . . BA 9 134.793 145.843 121.174 1 38.11 ? H242 CLR 821 R 1 HETATM 67 H H25 CLR . . . BA 9 132.443 143.889 120.981 1 39.5 ? H25 CLR 821 R 1 HETATM 68 H H261 CLR . . . BA 9 132.837 145.976 123.196 1 38.84 ? H261 CLR 821 R 1 HETATM 69 H H262 CLR . . . BA 9 131.542 145.989 121.981 1 37.39 ? H262 CLR 821 R 1 HETATM 70 H H263 CLR . . . BA 9 131.617 144.685 123.18 1 38 ? H263 CLR 821 R 1 HETATM 71 H H271 CLR . . . BA 9 134.719 144.156 123.041 1 37.41 ? H271 CLR 821 R 1 HETATM 72 H H272 CLR . . . BA 9 134.646 142.942 121.748 1 37.64 ? H272 CLR 821 R 1 HETATM 73 H H273 CLR . . . BA 9 133.449 142.916 123.054 1 37.1 ? H273 CLR 821 R 1 HETATM 74 H H1 CLR . . . BA 9 143.289 146.548 107.953 1 37.57 ? H1 CLR 821 R 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 74 #