data_7XW6 # _model_server_result.job_id bihWFjZSKvzXQ5UhZlcSvw _model_server_result.datetime_utc '2024-11-04 22:33:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"EA","auth_seq_id":824}' # _entry.id 7XW6 # _exptl.entry_id 7XW6 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 CA N N ? 10 DA N N ? 10 EA N N ? 10 FA N N ? 10 GA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 L CYS 23 1_555 D SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 E SG CYS 22 N CYS 22 1_555 E SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 E SG CYS 99 N CYS 99 1_555 E SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 F SG CYS 9 R CYS 29 1_555 F SG CYS 21 R CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 F SG CYS 263 R CYS 283 1_555 F SG CYS 328 R CYS 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 F SG CYS 264 R CYS 284 1_555 F SG CYS 338 R CYS 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf7 F SG CYS 424 R CYS 494 1_555 F SG CYS 499 R CYS 569 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf8 G SG CYS 22 Y CYS 22 1_555 G SG CYS 96 Y CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 F ND2 ASN 57 R ASN 77 1_555 K C1 NAG . R NAG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale2 F ND2 ASN 79 R ASN 99 1_555 J C1 NAG . R NAG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale3 F ND2 ASN 157 R ASN 177 1_555 I C1 NAG . R NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale4 F ND2 ASN 178 R ASN 198 1_555 H C1 NAG . R NAG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 437 n n C1 O2 PLM doub 438 n n C1 C2 PLM sing 439 n n O1 H PLM sing 440 n n C2 C3 PLM sing 441 n n C2 H21 PLM sing 442 n n C2 H22 PLM sing 443 n n C3 C4 PLM sing 444 n n C3 H31 PLM sing 445 n n C3 H32 PLM sing 446 n n C4 C5 PLM sing 447 n n C4 H41 PLM sing 448 n n C4 H42 PLM sing 449 n n C5 C6 PLM sing 450 n n C5 H51 PLM sing 451 n n C5 H52 PLM sing 452 n n C6 C7 PLM sing 453 n n C6 H61 PLM sing 454 n n C6 H62 PLM sing 455 n n C7 C8 PLM sing 456 n n C7 H71 PLM sing 457 n n C7 H72 PLM sing 458 n n C8 C9 PLM sing 459 n n C8 H81 PLM sing 460 n n C8 H82 PLM sing 461 n n C9 CA PLM sing 462 n n C9 H91 PLM sing 463 n n C9 H92 PLM sing 464 n n CA CB PLM sing 465 n n CA HA1 PLM sing 466 n n CA HA2 PLM sing 467 n n CB CC PLM sing 468 n n CB HB1 PLM sing 469 n n CB HB2 PLM sing 470 n n CC CD PLM sing 471 n n CC HC1 PLM sing 472 n n CC HC2 PLM sing 473 n n CD CE PLM sing 474 n n CD HD1 PLM sing 475 n n CD HD2 PLM sing 476 n n CE CF PLM sing 477 n n CE HE1 PLM sing 478 n n CE HE2 PLM sing 479 n n CF CG PLM sing 480 n n CF HF1 PLM sing 481 n n CF HF2 PLM sing 482 n n CG HG1 PLM sing 483 n n CG HG2 PLM sing 484 n n CG HG3 PLM sing 485 n n # _atom_sites.entry_id 7XW6 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 8 NAG R 1 801 701 NAG NAG . I 8 NAG R 1 802 702 NAG NAG . J 8 NAG R 1 803 703 NAG NAG . K 8 NAG R 1 804 704 NAG NAG . L 9 CLR R 1 805 705 CLR CLR . M 9 CLR R 1 806 706 CLR CLR . N 9 CLR R 1 807 1 CLR CLR . O 9 CLR R 1 808 2 CLR CLR . P 9 CLR R 1 809 3 CLR CLR . Q 9 CLR R 1 810 4 CLR CLR . R 9 CLR R 1 811 5 CLR CLR . S 9 CLR R 1 812 6 CLR CLR . T 9 CLR R 1 813 7 CLR CLR . U 9 CLR R 1 814 8 CLR CLR . V 9 CLR R 1 815 9 CLR CLR . W 9 CLR R 1 816 10 CLR CLR . X 9 CLR R 1 817 11 CLR CLR . Y 9 CLR R 1 818 12 CLR CLR . Z 9 CLR R 1 819 13 CLR CLR . AA 9 CLR R 1 820 14 CLR CLR . BA 9 CLR R 1 821 15 CLR CLR . CA 10 PLM R 1 822 16 PLM PLM . DA 10 PLM R 1 823 17 PLM PLM . EA 10 PLM R 1 824 18 PLM PLM . FA 10 PLM R 1 825 19 PLM PLM . GA 10 PLM R 1 826 20 PLM PLM . HA 11 HOI R 1 827 1 HOI LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . EA 10 145.387 130.793 146.612 1 62.64 ? C1 PLM 824 R 1 HETATM 2 O O1 PLM . . . EA 10 144.622 130.398 147.476 1 60.04 ? O1 PLM 824 R 1 HETATM 3 O O2 PLM . . . EA 10 146.532 130.388 146.5 1 60.29 ? O2 PLM 824 R 1 HETATM 4 C C2 PLM . . . EA 10 144.911 131.904 145.67 1 56.98 ? C2 PLM 824 R 1 HETATM 5 C C3 PLM . . . EA 10 144.802 131.422 144.199 1 52.55 ? C3 PLM 824 R 1 HETATM 6 C C4 PLM . . . EA 10 144.256 132.499 143.225 1 58.21 ? C4 PLM 824 R 1 HETATM 7 C C5 PLM . . . EA 10 145.155 133.762 143.149 1 56.95 ? C5 PLM 824 R 1 HETATM 8 C C6 PLM . . . EA 10 144.9 134.628 141.89 1 55.12 ? C6 PLM 824 R 1 HETATM 9 C C7 PLM . . . EA 10 143.527 135.342 141.891 1 57.96 ? C7 PLM 824 R 1 HETATM 10 C C8 PLM . . . EA 10 143.347 136.226 140.637 1 55.91 ? C8 PLM 824 R 1 HETATM 11 C C9 PLM . . . EA 10 141.968 136.939 140.602 1 55.27 ? C9 PLM 824 R 1 HETATM 12 C CA PLM . . . EA 10 141.775 137.859 139.367 1 56.73 ? CA PLM 824 R 1 HETATM 13 C CB PLM . . . EA 10 142.126 137.175 138.02 1 55.25 ? CB PLM 824 R 1 HETATM 14 C CC PLM . . . EA 10 141.574 137.959 136.81 1 55.28 ? CC PLM 824 R 1 HETATM 15 C CD PLM . . . EA 10 142.064 137.423 135.442 1 55.18 ? CD PLM 824 R 1 HETATM 16 C CE PLM . . . EA 10 141.513 136.018 135.081 1 56.89 ? CE PLM 824 R 1 HETATM 17 C CF PLM . . . EA 10 142.045 135.497 133.723 1 54.3 ? CF PLM 824 R 1 HETATM 18 C CG PLM . . . EA 10 141.517 136.288 132.503 1 51.55 ? CG PLM 824 R 1 HETATM 19 H H21 PLM . . . EA 10 145.614 132.744 145.743 1 53.22 ? H21 PLM 824 R 1 HETATM 20 H H22 PLM . . . EA 10 143.935 132.275 146.008 1 53.17 ? H22 PLM 824 R 1 HETATM 21 H H31 PLM . . . EA 10 144.148 130.542 144.161 1 52.64 ? H31 PLM 824 R 1 HETATM 22 H H32 PLM . . . EA 10 145.787 131.088 143.85 1 52.55 ? H32 PLM 824 R 1 HETATM 23 H H41 PLM . . . EA 10 143.238 132.78 143.52 1 53.74 ? H41 PLM 824 R 1 HETATM 24 H H42 PLM . . . EA 10 144.181 132.05 142.227 1 53.58 ? H42 PLM 824 R 1 HETATM 25 H H51 PLM . . . EA 10 146.207 133.452 143.142 1 53.05 ? H51 PLM 824 R 1 HETATM 26 H H52 PLM . . . EA 10 145.015 134.373 144.05 1 52.94 ? H52 PLM 824 R 1 HETATM 27 H H61 PLM . . . EA 10 144.99 134.002 140.993 1 52.23 ? H61 PLM 824 R 1 HETATM 28 H H62 PLM . . . EA 10 145.693 135.383 141.822 1 52.99 ? H62 PLM 824 R 1 HETATM 29 H H71 PLM . . . EA 10 143.44 135.967 142.789 1 53.37 ? H71 PLM 824 R 1 HETATM 30 H H72 PLM . . . EA 10 142.722 134.598 141.926 1 53.31 ? H72 PLM 824 R 1 HETATM 31 H H81 PLM . . . EA 10 143.462 135.589 139.751 1 53.38 ? H81 PLM 824 R 1 HETATM 32 H H82 PLM . . . EA 10 144.146 136.977 140.599 1 52.74 ? H82 PLM 824 R 1 HETATM 33 H H91 PLM . . . EA 10 141.847 137.54 141.512 1 52.91 ? H91 PLM 824 R 1 HETATM 34 H H92 PLM . . . EA 10 141.165 136.193 140.621 1 52.94 ? H92 PLM 824 R 1 HETATM 35 H HA1 PLM . . . EA 10 142.391 138.759 139.483 1 53.04 ? HA1 PLM 824 R 1 HETATM 36 H HA2 PLM . . . EA 10 140.732 138.2 139.346 1 53.34 ? HA2 PLM 824 R 1 HETATM 37 H HB1 PLM . . . EA 10 141.728 136.153 138.011 1 53.26 ? HB1 PLM 824 R 1 HETATM 38 H HB2 PLM . . . EA 10 143.216 137.094 137.927 1 52.89 ? HB2 PLM 824 R 1 HETATM 39 H HC1 PLM . . . EA 10 141.892 139.005 136.901 1 52.79 ? HC1 PLM 824 R 1 HETATM 40 H HC2 PLM . . . EA 10 140.477 137.953 136.842 1 53.31 ? HC2 PLM 824 R 1 HETATM 41 H HD1 PLM . . . EA 10 143.161 137.399 135.434 1 52.71 ? HD1 PLM 824 R 1 HETATM 42 H HD2 PLM . . . EA 10 141.765 138.141 134.669 1 52.97 ? HD2 PLM 824 R 1 HETATM 43 H HE1 PLM . . . EA 10 140.416 136.035 135.063 1 53.69 ? HE1 PLM 824 R 1 HETATM 44 H HE2 PLM . . . EA 10 141.8 135.3 135.859 1 53.28 ? HE2 PLM 824 R 1 HETATM 45 H HF1 PLM . . . EA 10 141.758 134.443 133.615 1 52.9 ? HF1 PLM 824 R 1 HETATM 46 H HF2 PLM . . . EA 10 143.142 135.518 133.724 1 53.08 ? HF2 PLM 824 R 1 HETATM 47 H HG1 PLM . . . EA 10 141.838 135.812 131.568 1 52.73 ? HG1 PLM 824 R 1 HETATM 48 H HG2 PLM . . . EA 10 141.9 137.316 132.5 1 52.52 ? HG2 PLM 824 R 1 HETATM 49 H HG3 PLM . . . EA 10 140.421 136.331 132.503 1 53.34 ? HG3 PLM 824 R 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 49 #