data_7XWP
#
_model_server_result.job_id            iEM4DwcN_kzaLIFKC5XFig 
_model_server_result.datetime_utc      '2025-09-12 09:20:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xwp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":601}' 
#
_entry.id    7XWP 
#
_exptl.entry_id    7XWP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              273.714 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2~{S})-3-(2-chloranyl-4-oxidanyl-phenyl)-2-(4-hydroxyphenyl)propanenitrile 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7XWP 
_cell.length_a            52.121 
_cell.length_b            89.017 
_cell.length_c            101.235 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XWP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C15 H12 Cl N O2' 
_chem_comp.formula_weight    273.714 
_chem_comp.id                I1I 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2~{S})-3-(2-chloranyl-4-oxidanyl-phenyl)-2-(4-hydroxyphenyl)propanenitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 C12 I1I sing 152 n n 
C11 C12 I1I doub 153 n y 
C11 C10 I1I sing 154 n y 
C12 C13 I1I sing 155 n y 
C10 C9 I1I doub 156 n y 
C13 C14 I1I doub 157 n y 
C9 C14 I1I sing 158 n y 
C9 C8 I1I sing 159 n n 
C14 CL1 I1I sing 160 n n 
C8 C7 I1I sing 161 n n 
C7 C4 I1I sing 162 n n 
C7 C15 I1I sing 163 n n 
C3 C4 I1I doub 164 n y 
C3 C2 I1I sing 165 n y 
C4 C5 I1I sing 166 n y 
C15 N1 I1I trip 167 n n 
C2 C1 I1I doub 168 n y 
C5 C6 I1I doub 169 n y 
C1 C6 I1I sing 170 n y 
C1 O1 I1I sing 171 n n 
C5 H1 I1I sing 172 n n 
C6 H2 I1I sing 173 n n 
C7 H3 I1I sing 174 n n 
C8 H4 I1I sing 175 n n 
C8 H5 I1I sing 176 n n 
C10 H6 I1I sing 177 n n 
C13 H7 I1I sing 178 n n 
O1 H8 I1I sing 179 n n 
C2 H9 I1I sing 180 n n 
C3 H10 I1I sing 181 n n 
C11 H11 I1I sing 182 n n 
O2 H12 I1I sing 183 n n 
#
_atom_sites.entry_id                     7XWP 
_atom_sites.fract_transf_matrix[1][1]    0.019186 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011234 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009878 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 I1I A 1 601 1 I1I LIG . 
F 3 I1I B 1 601 1 I1I LIG . 
G 4 HOH A 1 701 2 HOH HOH . 
G 4 HOH A 2 702 20 HOH HOH . 
G 4 HOH A 3 703 35 HOH HOH . 
G 4 HOH A 4 704 11 HOH HOH . 
G 4 HOH A 5 705 10 HOH HOH . 
G 4 HOH A 6 706 14 HOH HOH . 
G 4 HOH A 7 707 29 HOH HOH . 
G 4 HOH A 8 708 15 HOH HOH . 
G 4 HOH A 9 709 7 HOH HOH . 
G 4 HOH A 10 710 24 HOH HOH . 
G 4 HOH A 11 711 30 HOH HOH . 
G 4 HOH A 12 712 4 HOH HOH . 
G 4 HOH A 13 713 23 HOH HOH . 
G 4 HOH A 14 714 40 HOH HOH . 
H 4 HOH B 1 701 26 HOH HOH . 
H 4 HOH B 2 702 37 HOH HOH . 
H 4 HOH B 3 703 16 HOH HOH . 
H 4 HOH B 4 704 36 HOH HOH . 
H 4 HOH B 5 705 1 HOH HOH . 
H 4 HOH B 6 706 28 HOH HOH . 
H 4 HOH B 7 707 31 HOH HOH . 
H 4 HOH B 8 708 19 HOH HOH . 
H 4 HOH B 9 709 17 HOH HOH . 
H 4 HOH B 10 710 39 HOH HOH . 
H 4 HOH B 11 711 33 HOH HOH . 
H 4 HOH B 12 712 21 HOH HOH . 
H 4 HOH B 13 713 8 HOH HOH . 
H 4 HOH B 14 714 18 HOH HOH . 
H 4 HOH B 15 715 34 HOH HOH . 
H 4 HOH B 16 716 5 HOH HOH . 
H 4 HOH B 17 717 32 HOH HOH . 
H 4 HOH B 18 718 12 HOH HOH . 
H 4 HOH B 19 719 9 HOH HOH . 
H 4 HOH B 20 720 13 HOH HOH . 
I 4 HOH C 1 701 27 HOH HOH . 
J 4 HOH D 1 701 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 I1I . A . E 3 -2.806 -5.268 -38.016 0.08 4.75 ? N1 I1I 601 A 1 
HETATM 2 N N1 I1I . B . E 3 -4.017 -10.962 -39.893 0.08 6.65 ? N1 I1I 601 A 1 
HETATM 3 N N1 I1I . C . E 3 -3.856 -11.149 -39.961 0.33 21.94 ? N1 I1I 601 A 1 
HETATM 4 N N1 I1I . D . E 3 -3.412 -4.27 -39.275 0.5 41.45 ? N1 I1I 601 A 1 
HETATM 5 C C4 I1I . A . E 3 -5.606 -7.127 -38.715 0.08 4.91 ? C4 I1I 601 A 1 
HETATM 6 C C4 I1I . B . E 3 -5.452 -8.267 -38.438 0.08 6.92 ? C4 I1I 601 A 1 
HETATM 7 C C4 I1I . C . E 3 -5.184 -8.401 -38.544 0.33 25.09 ? C4 I1I 601 A 1 
HETATM 8 C C4 I1I . D . E 3 -5.035 -7.286 -38.376 0.5 48.79 ? C4 I1I 601 A 1 
HETATM 9 C C5 I1I . A . E 3 -5.884 -6.495 -37.512 0.08 4.93 ? C5 I1I 601 A 1 
HETATM 10 C C5 I1I . B . E 3 -5.701 -8.193 -37.076 0.08 7.04 ? C5 I1I 601 A 1 
HETATM 11 C C5 I1I . C . E 3 -5.435 -7.991 -37.244 0.33 26.2 ? C5 I1I 601 A 1 
HETATM 12 C C5 I1I . D . E 3 -5.299 -6.783 -37.109 0.5 48.78 ? C5 I1I 601 A 1 
HETATM 13 C C6 I1I . A . E 3 -7.089 -6.686 -36.858 0.08 4.95 ? C6 I1I 601 A 1 
HETATM 14 C C6 I1I . B . E 3 -6.981 -7.994 -36.585 0.08 7.12 ? C6 I1I 601 A 1 
HETATM 15 C C6 I1I . C . E 3 -6.721 -7.727 -36.803 0.33 26.69 ? C6 I1I 601 A 1 
HETATM 16 C C6 I1I . D . E 3 -6.445 -7.14 -36.415 0.5 48.8 ? C6 I1I 601 A 1 
HETATM 17 C C7 I1I . A . E 3 -4.282 -6.908 -39.431 0.08 4.82 ? C7 I1I 601 A 1 
HETATM 18 C C7 I1I . B . E 3 -4.047 -8.48 -38.973 0.08 6.71 ? C7 I1I 601 A 1 
HETATM 19 C C7 I1I . C . E 3 -3.769 -8.677 -39.022 0.33 23.81 ? C7 I1I 601 A 1 
HETATM 20 C C7 I1I . D . E 3 -3.811 -6.858 -39.169 0.5 46.94 ? C7 I1I 601 A 1 
HETATM 21 C C8 I1I . A . E 3 -3.573 -8.23 -39.67 0.08 4.77 ? C8 I1I 601 A 1 
HETATM 22 C C8 I1I . B . E 3 -3.752 -7.476 -40.088 0.08 6.54 ? C8 I1I 601 A 1 
HETATM 23 C C8 I1I . C . E 3 -3.349 -7.569 -39.991 0.33 23.32 ? C8 I1I 601 A 1 
HETATM 24 C C8 I1I . D . E 3 -2.514 -7.516 -38.712 0.5 48.21 ? C8 I1I 601 A 1 
HETATM 25 C C10 I1I . A . E 3 -2.527 -8.491 -41.968 0.08 4.71 ? C10 I1I 601 A 1 
HETATM 26 C C10 I1I . B . E 3 -2.473 -8.442 -42.052 0.08 6.33 ? C10 I1I 601 A 1 
HETATM 27 C C10 I1I . C . E 3 -0.783 -7.508 -40.047 0.33 22.18 ? C10 I1I 601 A 1 
HETATM 28 C C10 I1I . D . E 3 -0.234 -7.368 -39.866 0.5 48.34 ? C10 I1I 601 A 1 
HETATM 29 C C13 I1I . A . E 3 -0.064 -7.647 -41.024 0.08 4.7 ? C13 I1I 601 A 1 
HETATM 30 C C13 I1I . B . E 3 -0.062 -7.546 -41.026 0.08 6.29 ? C13 I1I 601 A 1 
HETATM 31 C C13 I1I . C . E 3 -0.812 -8.275 -42.713 0.33 23.15 ? C13 I1I 601 A 1 
HETATM 32 C C13 I1I . D . E 3 -1.355 -8.351 -42.21 0.5 47.98 ? C13 I1I 601 A 1 
HETATM 33 C C15 I1I . A . E 3 -3.414 -5.994 -38.666 0.08 4.78 ? C15 I1I 601 A 1 
HETATM 34 C C15 I1I . B . E 3 -3.875 -9.878 -39.417 0.08 6.68 ? C15 I1I 601 A 1 
HETATM 35 C C15 I1I . C . E 3 -3.683 -10.051 -39.562 0.33 22.77 ? C15 I1I 601 A 1 
HETATM 36 C C15 I1I . D . E 3 -3.667 -5.391 -39.149 0.5 42.07 ? C15 I1I 601 A 1 
HETATM 37 O O1 I1I . A . E 3 -9.231 -7.724 -36.769 0.08 5.05 ? O1 I1I 601 A 1 
HETATM 38 O O1 I1I . B . E 3 -9.308 -7.678 -36.995 0.08 7.26 ? O1 I1I 601 A 1 
HETATM 39 O O1 I1I . C . E 3 -9.06 -7.624 -37.236 0.33 26.71 ? O1 I1I 601 A 1 
HETATM 40 O O1 I1I . D . E 3 -8.495 -8.367 -36.327 0.5 42.85 ? O1 I1I 601 A 1 
HETATM 41 C C1 I1I . A . E 3 -8.041 -7.527 -37.403 0.08 5.01 ? C1 I1I 601 A 1 
HETATM 42 C C1 I1I . B . E 3 -8.042 -7.872 -37.464 0.08 7.16 ? C1 I1I 601 A 1 
HETATM 43 C C1 I1I . C . E 3 -7.789 -7.871 -37.668 0.33 26.84 ? C1 I1I 601 A 1 
HETATM 44 C C1 I1I . D . E 3 -7.363 -7.996 -36.995 0.5 48.08 ? C1 I1I 601 A 1 
HETATM 45 C C2 I1I . A . E 3 -7.787 -8.162 -38.605 0.08 4.98 ? C2 I1I 601 A 1 
HETATM 46 C C2 I1I . B . E 3 -7.816 -7.943 -38.826 0.08 7.16 ? C2 I1I 601 A 1 
HETATM 47 C C2 I1I . C . E 3 -7.562 -8.274 -38.971 0.33 26.86 ? C2 I1I 601 A 1 
HETATM 48 C C2 I1I . D . E 3 -7.128 -8.488 -38.265 0.5 48.66 ? C2 I1I 601 A 1 
HETATM 49 C C3 I1I . A . E 3 -6.578 -7.961 -39.248 0.08 4.95 ? C3 I1I 601 A 1 
HETATM 50 C C3 I1I . B . E 3 -6.531 -8.139 -39.301 0.08 7.06 ? C3 I1I 601 A 1 
HETATM 51 C C3 I1I . C . E 3 -6.269 -8.531 -39.401 0.33 26.35 ? C3 I1I 601 A 1 
HETATM 52 C C3 I1I . D . E 3 -5.981 -8.123 -38.947 0.5 49.43 ? C3 I1I 601 A 1 
HETATM 53 C C9 I1I . A . E 3 -2.407 -8.143 -40.624 0.08 4.74 ? C9 I1I 601 A 1 
HETATM 54 C C9 I1I . B . E 3 -2.475 -7.75 -40.844 0.08 6.42 ? C9 I1I 601 A 1 
HETATM 55 C C9 I1I . C . E 3 -2.006 -7.746 -40.664 0.33 23.5 ? C9 I1I 601 A 1 
HETATM 56 C C9 I1I . D . E 3 -1.583 -7.7 -39.884 0.5 48.8 ? C9 I1I 601 A 1 
HETATM 57 C C11 I1I . A . E 3 -1.445 -8.424 -42.83 0.08 4.71 ? C11 I1I 601 A 1 
HETATM 58 C C11 I1I . B . E 3 -1.297 -8.69 -42.738 0.08 6.33 ? C11 I1I 601 A 1 
HETATM 59 C C11 I1I . C . E 3 0.407 -7.665 -40.742 0.33 22.18 ? C11 I1I 601 A 1 
HETATM 60 C C11 I1I . D . E 3 0.553 -7.543 -40.992 0.5 47.71 ? C11 I1I 601 A 1 
HETATM 61 C C12 I1I . A . E 3 -0.215 -8.001 -42.355 0.08 4.71 ? C12 I1I 601 A 1 
HETATM 62 C C12 I1I . B . E 3 -0.092 -8.241 -42.224 0.08 6.33 ? C12 I1I 601 A 1 
HETATM 63 C C12 I1I . C . E 3 0.394 -8.051 -42.074 0.33 22.54 ? C12 I1I 601 A 1 
HETATM 64 C C12 I1I . D . E 3 -0.008 -8.036 -42.159 0.5 47.4 ? C12 I1I 601 A 1 
HETATM 65 O O2 I1I . A . E 3 0.864 -7.93 -43.204 0.08 4.74 ? O2 I1I 601 A 1 
HETATM 66 O O2 I1I . B . E 3 1.083 -8.482 -42.896 0.08 6.32 ? O2 I1I 601 A 1 
HETATM 67 O O2 I1I . C . E 3 1.573 -8.216 -42.765 0.33 21.33 ? O2 I1I 601 A 1 
HETATM 68 O O2 I1I . D . E 3 0.78 -8.205 -43.272 0.5 45.21 ? O2 I1I 601 A 1 
HETATM 69 C C14 I1I . A . E 3 -1.156 -7.726 -40.177 0.08 4.71 ? C14 I1I 601 A 1 
HETATM 70 C C14 I1I . B . E 3 -1.247 -7.316 -40.349 0.08 6.33 ? C14 I1I 601 A 1 
HETATM 71 C C14 I1I . C . E 3 -1.981 -8.107 -41.997 0.33 23.67 ? C14 I1I 601 A 1 
HETATM 72 C C14 I1I . D . E 3 -2.122 -8.165 -41.074 0.5 49.94 ? C14 I1I 601 A 1 
HETATM 73 CL CL1 I1I . A . E 3 -0.911 -7.271 -38.509 0.08 4.73 ? CL1 I1I 601 A 1 
HETATM 74 CL CL1 I1I . B . E 3 -1.151 -6.421 -38.852 0.08 6.22 ? CL1 I1I 601 A 1 
HETATM 75 CL CL1 I1I . C . E 3 -3.472 -8.38 -42.817 0.33 31.23 ? CL1 I1I 601 A 1 
HETATM 76 CL CL1 I1I . D . E 3 -3.815 -8.565 -41.149 0.5 62.85 ? CL1 I1I 601 A 1 
#
_model_server_stats.io_time_ms              36 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           76 
#