data_7XWQ # _model_server_result.job_id 0xttoX4GpmyVuxdH-4BOeg _model_server_result.datetime_utc '2024-10-11 02:22:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xwq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 7XWQ # _exptl.entry_id 7XWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 273.714 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{R})-2-(2-chloranyl-4-oxidanyl-phenyl)-3-(4-hydroxyphenyl)propanenitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XWQ _cell.length_a 52.002 _cell.length_b 88.944 _cell.length_c 101.094 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C15 H12 Cl N O2' _chem_comp.formula_weight 273.714 _chem_comp.id I1M _chem_comp.mon_nstd_flag . _chem_comp.name (2~{R})-2-(2-chloranyl-4-oxidanyl-phenyl)-3-(4-hydroxyphenyl)propanenitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C11 I1M sing 152 n n C12 C11 I1M doub 153 n y C12 C13 I1M sing 154 n y CL1 C13 I1M sing 155 n n C11 C10 I1M sing 156 n y C13 C8 I1M doub 157 n y C10 C9 I1M doub 158 n y C8 C9 I1M sing 159 n y C8 C6 I1M sing 160 n n C6 C5 I1M sing 161 n n C6 C7 I1M sing 162 n n C3 C2 I1M doub 163 n y C3 C4 I1M sing 164 n y C5 C4 I1M sing 165 n n C7 N1 I1M trip 166 n n C2 C1 I1M sing 167 n y C4 C14 I1M doub 168 n y C1 O1 I1M sing 169 n n C1 C15 I1M doub 170 n y C14 C15 I1M sing 171 n y C5 H1 I1M sing 172 n n C5 H2 I1M sing 173 n n C6 H3 I1M sing 174 n n C10 H4 I1M sing 175 n n C15 H5 I1M sing 176 n n O1 H6 I1M sing 177 n n C2 H7 I1M sing 178 n n C3 H8 I1M sing 179 n n C9 H9 I1M sing 180 n n O2 H10 I1M sing 181 n n C12 H11 I1M sing 182 n n C14 H12 I1M sing 183 n n # _atom_sites.entry_id 7XWQ _atom_sites.fract_transf_matrix[1][1] 0.01923 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011243 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 I1M A 1 601 1 I1M LIG . F 3 I1M B 1 601 1 I1M LIG . G 4 HOH A 1 701 73 HOH HOH . G 4 HOH A 2 702 113 HOH HOH . G 4 HOH A 3 703 112 HOH HOH . G 4 HOH A 4 704 72 HOH HOH . G 4 HOH A 5 705 102 HOH HOH . G 4 HOH A 6 706 3 HOH HOH . G 4 HOH A 7 707 95 HOH HOH . G 4 HOH A 8 708 7 HOH HOH . G 4 HOH A 9 709 81 HOH HOH . G 4 HOH A 10 710 64 HOH HOH . G 4 HOH A 11 711 43 HOH HOH . G 4 HOH A 12 712 88 HOH HOH . G 4 HOH A 13 713 34 HOH HOH . G 4 HOH A 14 714 46 HOH HOH . G 4 HOH A 15 715 10 HOH HOH . G 4 HOH A 16 716 42 HOH HOH . G 4 HOH A 17 717 13 HOH HOH . G 4 HOH A 18 718 92 HOH HOH . G 4 HOH A 19 719 5 HOH HOH . G 4 HOH A 20 720 30 HOH HOH . G 4 HOH A 21 721 68 HOH HOH . G 4 HOH A 22 722 87 HOH HOH . G 4 HOH A 23 723 53 HOH HOH . G 4 HOH A 24 724 4 HOH HOH . G 4 HOH A 25 725 37 HOH HOH . G 4 HOH A 26 726 75 HOH HOH . G 4 HOH A 27 727 78 HOH HOH . G 4 HOH A 28 728 74 HOH HOH . G 4 HOH A 29 729 27 HOH HOH . G 4 HOH A 30 730 99 HOH HOH . G 4 HOH A 31 731 12 HOH HOH . G 4 HOH A 32 732 55 HOH HOH . G 4 HOH A 33 733 107 HOH HOH . G 4 HOH A 34 734 28 HOH HOH . G 4 HOH A 35 735 41 HOH HOH . G 4 HOH A 36 736 51 HOH HOH . G 4 HOH A 37 737 116 HOH HOH . G 4 HOH A 38 738 59 HOH HOH . G 4 HOH A 39 739 65 HOH HOH . G 4 HOH A 40 740 82 HOH HOH . G 4 HOH A 41 741 80 HOH HOH . G 4 HOH A 42 742 84 HOH HOH . G 4 HOH A 43 743 117 HOH HOH . G 4 HOH A 44 744 114 HOH HOH . G 4 HOH A 45 745 90 HOH HOH . G 4 HOH A 46 746 86 HOH HOH . G 4 HOH A 47 747 52 HOH HOH . H 4 HOH B 1 701 50 HOH HOH . H 4 HOH B 2 702 15 HOH HOH . H 4 HOH B 3 703 57 HOH HOH . H 4 HOH B 4 704 9 HOH HOH . H 4 HOH B 5 705 22 HOH HOH . H 4 HOH B 6 706 17 HOH HOH . H 4 HOH B 7 707 96 HOH HOH . H 4 HOH B 8 708 56 HOH HOH . H 4 HOH B 9 709 67 HOH HOH . H 4 HOH B 10 710 45 HOH HOH . H 4 HOH B 11 711 93 HOH HOH . H 4 HOH B 12 712 38 HOH HOH . H 4 HOH B 13 713 2 HOH HOH . H 4 HOH B 14 714 26 HOH HOH . H 4 HOH B 15 715 20 HOH HOH . H 4 HOH B 16 716 60 HOH HOH . H 4 HOH B 17 717 21 HOH HOH . H 4 HOH B 18 718 32 HOH HOH . H 4 HOH B 19 719 1 HOH HOH . H 4 HOH B 20 720 104 HOH HOH . H 4 HOH B 21 721 44 HOH HOH . H 4 HOH B 22 722 25 HOH HOH . H 4 HOH B 23 723 8 HOH HOH . H 4 HOH B 24 724 39 HOH HOH . H 4 HOH B 25 725 49 HOH HOH . H 4 HOH B 26 726 48 HOH HOH . H 4 HOH B 27 727 19 HOH HOH . H 4 HOH B 28 728 35 HOH HOH . H 4 HOH B 29 729 40 HOH HOH . H 4 HOH B 30 730 18 HOH HOH . H 4 HOH B 31 731 31 HOH HOH . H 4 HOH B 32 732 16 HOH HOH . H 4 HOH B 33 733 54 HOH HOH . H 4 HOH B 34 734 94 HOH HOH . H 4 HOH B 35 735 85 HOH HOH . H 4 HOH B 36 736 61 HOH HOH . H 4 HOH B 37 737 66 HOH HOH . H 4 HOH B 38 738 91 HOH HOH . H 4 HOH B 39 739 69 HOH HOH . H 4 HOH B 40 740 70 HOH HOH . H 4 HOH B 41 741 97 HOH HOH . H 4 HOH B 42 742 24 HOH HOH . H 4 HOH B 43 743 89 HOH HOH . H 4 HOH B 44 744 109 HOH HOH . H 4 HOH B 45 745 11 HOH HOH . I 4 HOH C 1 701 71 HOH HOH . I 4 HOH C 2 702 23 HOH HOH . J 4 HOH D 1 701 33 HOH HOH . J 4 HOH D 2 702 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 I1M . . . E 3 -2.695 -5.203 -37.978 1 19.44 ? N1 I1M 601 A 1 HETATM 2 C C4 I1M . . . E 3 -4.816 -8.16 -38.472 1 20.81 ? C4 I1M 601 A 1 HETATM 3 C C5 I1M . . . E 3 -3.444 -8.332 -39.044 1 20.96 ? C5 I1M 601 A 1 HETATM 4 C C6 I1M . . . E 3 -2.971 -7.084 -39.782 1 19.44 ? C6 I1M 601 A 1 HETATM 5 C C7 I1M . . . E 3 -2.824 -5.993 -38.801 1 19.32 ? C7 I1M 601 A 1 HETATM 6 C C8 I1M . . . E 3 -1.69 -7.375 -40.557 1 18.49 ? C8 I1M 601 A 1 HETATM 7 C C10 I1M . . . E 3 0.702 -7.391 -40.843 1 17.53 ? C10 I1M 601 A 1 HETATM 8 C C13 I1M . . . E 3 -1.777 -7.939 -41.827 1 20.39 ? C13 I1M 601 A 1 HETATM 9 C C15 I1M . . . E 3 -6.3 -7.616 -36.632 1 21.03 ? C15 I1M 601 A 1 HETATM 10 O O1 I1M . . . E 3 -8.68 -7.698 -36.992 1 21.88 ? O1 I1M 601 A 1 HETATM 11 C C1 I1M . . . E 3 -7.398 -7.832 -37.443 1 21.94 ? C1 I1M 601 A 1 HETATM 12 C C2 I1M . . . E 3 -7.211 -8.196 -38.761 1 22.8 ? C2 I1M 601 A 1 HETATM 13 C C3 I1M . . . E 3 -5.927 -8.352 -39.269 1 22.49 ? C3 I1M 601 A 1 HETATM 14 C C9 I1M . . . E 3 -0.418 -7.126 -40.061 1 17.83 ? C9 I1M 601 A 1 HETATM 15 C C11 I1M . . . E 3 0.569 -7.952 -42.1 1 17.56 ? C11 I1M 601 A 1 HETATM 16 O O2 I1M . . . E 3 1.664 -8.254 -42.869 1 18.63 ? O2 I1M 601 A 1 HETATM 17 C C12 I1M . . . E 3 -0.684 -8.22 -42.609 1 19.29 ? C12 I1M 601 A 1 HETATM 18 CL CL1 I1M . . . E 3 -3.328 -8.238 -42.518 1 29.07 ? CL1 I1M 601 A 1 HETATM 19 C C14 I1M . . . E 3 -5.022 -7.773 -37.151 1 23.27 ? C14 I1M 601 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 19 #