data_7XWR # _model_server_result.job_id Rq3e858Q8nTED03ZsD2NBQ _model_server_result.datetime_utc '2024-11-25 23:57:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 7XWR # _exptl.entry_id 7XWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 273.714 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{S})-2-(2-chloranyl-4-oxidanyl-phenyl)-3-(4-hydroxyphenyl)propanenitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XWR _cell.length_a 52.436 _cell.length_b 89.226 _cell.length_c 101.532 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C15 H12 Cl N O2' _chem_comp.formula_weight 273.714 _chem_comp.id I2B _chem_comp.mon_nstd_flag . _chem_comp.name (2~{S})-2-(2-chloranyl-4-oxidanyl-phenyl)-3-(4-hydroxyphenyl)propanenitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 I2B sing 152 n n C15 C1 I2B doub 153 n y C15 C14 I2B sing 154 n y C1 C2 I2B sing 155 n y C14 C4 I2B doub 156 n y C2 C3 I2B doub 157 n y CL1 C13 I2B sing 158 n n C4 C3 I2B sing 159 n y C4 C5 I2B sing 160 n n C6 C5 I2B sing 161 n n C6 C7 I2B sing 162 n n C6 C8 I2B sing 163 n n C13 C8 I2B doub 164 n y C13 C12 I2B sing 165 n y C7 N1 I2B trip 166 n n C8 C9 I2B sing 167 n y C12 C11 I2B doub 168 n y C9 C10 I2B doub 169 n y C11 C10 I2B sing 170 n y C11 O2 I2B sing 171 n n C5 H1 I2B sing 172 n n C5 H2 I2B sing 173 n n C6 H3 I2B sing 174 n n C10 H4 I2B sing 175 n n C15 H5 I2B sing 176 n n O1 H6 I2B sing 177 n n C2 H7 I2B sing 178 n n C3 H8 I2B sing 179 n n C9 H9 I2B sing 180 n n O2 H10 I2B sing 181 n n C12 H11 I2B sing 182 n n C14 H12 I2B sing 183 n n # _atom_sites.entry_id 7XWR _atom_sites.fract_transf_matrix[1][1] 0.019071 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011207 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009849 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 I2B A 1 601 1 I2B LIG . F 3 I2B B 1 601 1 I2B LIG . G 4 HOH A 1 701 14 HOH HOH . G 4 HOH A 2 702 12 HOH HOH . G 4 HOH A 3 703 18 HOH HOH . G 4 HOH A 4 704 4 HOH HOH . G 4 HOH A 5 705 2 HOH HOH . G 4 HOH A 6 706 26 HOH HOH . G 4 HOH A 7 707 17 HOH HOH . G 4 HOH A 8 708 6 HOH HOH . G 4 HOH A 9 709 9 HOH HOH . G 4 HOH A 10 710 25 HOH HOH . H 4 HOH B 1 701 22 HOH HOH . H 4 HOH B 2 702 15 HOH HOH . H 4 HOH B 3 703 23 HOH HOH . H 4 HOH B 4 704 20 HOH HOH . H 4 HOH B 5 705 16 HOH HOH . H 4 HOH B 6 706 1 HOH HOH . H 4 HOH B 7 707 24 HOH HOH . H 4 HOH B 8 708 11 HOH HOH . H 4 HOH B 9 709 7 HOH HOH . H 4 HOH B 10 710 3 HOH HOH . H 4 HOH B 11 711 10 HOH HOH . H 4 HOH B 12 712 13 HOH HOH . H 4 HOH B 13 713 5 HOH HOH . H 4 HOH B 14 714 8 HOH HOH . I 4 HOH D 1 701 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 I2B . . . F 3 -1.589 18.195 40.026 1 20.77 0 N1 I2B 601 B 1 HETATM 2 C C4 I2B . . . F 3 -2.088 14.696 41.71 1 19.07 0 C4 I2B 601 B 1 HETATM 3 C C5 I2B . . . F 3 -0.818 14.933 40.907 1 20.51 0 C5 I2B 601 B 1 HETATM 4 C C6 I2B . . . F 3 -0.129 16.276 41.077 1 20.65 0 C6 I2B 601 B 1 HETATM 5 C C7 I2B . . . F 3 -0.948 17.341 40.473 1 22.25 0 C7 I2B 601 B 1 HETATM 6 C C8 I2B . . . F 3 1.257 16.305 40.456 1 22.92 0 C8 I2B 601 B 1 HETATM 7 C C10 I2B . . . F 3 2.809 17.105 38.759 1 21.69 0 C10 I2B 601 B 1 HETATM 8 C C13 I2B . . . F 3 2.33 15.671 41.076 1 25.8 0 C13 I2B 601 B 1 HETATM 9 C C15 I2B . . . F 3 -3.2 13.936 43.733 1 17.87 0 C15 I2B 601 B 1 HETATM 10 O O1 I2B . . . F 3 -5.595 13.824 43.808 1 18.72 0 O1 I2B 601 B 1 HETATM 11 C C1 I2B . . . F 3 -4.432 14.095 43.134 1 18.56 0 C1 I2B 601 B 1 HETATM 12 C C2 I2B . . . F 3 -4.497 14.573 41.836 1 19.39 0 C2 I2B 601 B 1 HETATM 13 C C3 I2B . . . F 3 -3.335 14.845 41.131 1 19.4 0 C3 I2B 601 B 1 HETATM 14 C C9 I2B . . . F 3 1.531 17.041 39.285 1 21.93 0 C9 I2B 601 B 1 HETATM 15 C C11 I2B . . . F 3 3.845 16.444 39.399 1 25.28 0 C11 I2B 601 B 1 HETATM 16 O O2 I2B . . . F 3 5.125 16.515 38.9 1 27.9 0 O2 I2B 601 B 1 HETATM 17 C C12 I2B . . . F 3 3.615 15.724 40.56 1 24.92 0 C12 I2B 601 B 1 HETATM 18 CL CL1 I2B . . . F 3 2.076 14.7 42.497 1 27.15 0 CL1 I2B 601 B 1 HETATM 19 C C14 I2B . . . F 3 -2.05 14.23 43.015 1 19.01 0 C14 I2B 601 B 1 HETATM 20 H H1 I2B . . . F 3 -1.037 14.818 39.958 1 20.19 0 H1 I2B 601 B 1 HETATM 21 H H2 I2B . . . F 3 -0.182 14.225 41.136 1 20.21 0 H2 I2B 601 B 1 HETATM 22 H H3 I2B . . . F 3 -0.036 16.474 42.046 1 21.34 0 H3 I2B 601 B 1 HETATM 23 H H4 I2B . . . F 3 2.98 17.617 37.986 1 22.69 0 H4 I2B 601 B 1 HETATM 24 H H5 I2B . . . F 3 -3.14 13.625 44.62 1 18.37 0 H5 I2B 601 B 1 HETATM 25 H H6 I2B . . . F 3 -5.275 13.603 44.699 0 26.72 0 H6 I2B 601 B 1 HETATM 26 H H7 I2B . . . F 3 -5.336 14.683 41.42 1 19.17 0 H7 I2B 601 B 1 HETATM 27 H H8 I2B . . . F 3 -3.398 15.144 40.238 1 19.28 0 H8 I2B 601 B 1 HETATM 28 H H9 I2B . . . F 3 0.835 17.515 38.863 1 22.3 0 H9 I2B 601 B 1 HETATM 29 H H10 I2B . . . F 3 5.716 16.053 39.687 0 35.98 0 H10 I2B 601 B 1 HETATM 30 H H11 I2B . . . F 3 4.313 15.257 40.979 1 25.04 0 H11 I2B 601 B 1 HETATM 31 H H12 I2B . . . F 3 -1.212 14.091 43.423 1 18.77 0 H12 I2B 601 B 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 700 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 31 #