data_7XWV
#
_model_server_result.job_id            5s4B2BPZMdat1mRPyIAcWw 
_model_server_result.datetime_utc      '2024-12-26 23:09:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xwv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":304}' 
#
_entry.id    7XWV 
#
_exptl.entry_id    7XWV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          5 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7XWV 
_cell.length_a            132.471 
_cell.length_b            132.471 
_cell.length_c            241.533 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XWV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 66.2355 -114.723251 0 
3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 132.471 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 272 n y 
N1 C5 IMD sing 273 n y 
N1 HN1 IMD sing 274 n n 
C2 N3 IMD doub 275 n y 
C2 H2 IMD sing 276 n n 
N3 C4 IMD sing 277 n y 
N3 HN3 IMD sing 278 n n 
C4 C5 IMD doub 279 n y 
C4 H4 IMD sing 280 n n 
C5 H5 IMD sing 281 n n 
#
_atom_sites.entry_id                     7XWV 
_atom_sites.fract_transf_matrix[1][1]    0.007549 
_atom_sites.fract_transf_matrix[1][2]    0.004358 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008717 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00414 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 V55 A 1 301 301 V55 V55 . 
D 3 GOL A 1 302 1 GOL GOL . 
E 3 GOL A 1 303 3 GOL GOL . 
F 4 COA A 1 304 1 COA COA . 
G 2 V55 B 1 301 301 V55 V55 . 
H 3 GOL B 1 302 2 GOL GOL . 
I 3 GOL B 1 303 4 GOL GOL . 
J 5 IMD B 1 304 1 IMD IMD . 
K 4 COA B 1 305 2 COA COA . 
L 6 HOH A 1 401 86 HOH HOH . 
L 6 HOH A 2 402 115 HOH HOH . 
L 6 HOH A 3 403 146 HOH HOH . 
L 6 HOH A 4 404 114 HOH HOH . 
L 6 HOH A 5 405 14 HOH HOH . 
L 6 HOH A 6 406 94 HOH HOH . 
L 6 HOH A 7 407 135 HOH HOH . 
L 6 HOH A 8 408 118 HOH HOH . 
L 6 HOH A 9 409 139 HOH HOH . 
L 6 HOH A 10 410 31 HOH HOH . 
L 6 HOH A 11 411 30 HOH HOH . 
L 6 HOH A 12 412 37 HOH HOH . 
L 6 HOH A 13 413 81 HOH HOH . 
L 6 HOH A 14 414 11 HOH HOH . 
L 6 HOH A 15 415 152 HOH HOH . 
L 6 HOH A 16 416 75 HOH HOH . 
L 6 HOH A 17 417 99 HOH HOH . 
L 6 HOH A 18 418 128 HOH HOH . 
L 6 HOH A 19 419 160 HOH HOH . 
L 6 HOH A 20 420 119 HOH HOH . 
L 6 HOH A 21 421 40 HOH HOH . 
L 6 HOH A 22 422 148 HOH HOH . 
L 6 HOH A 23 423 67 HOH HOH . 
L 6 HOH A 24 424 71 HOH HOH . 
L 6 HOH A 25 425 50 HOH HOH . 
L 6 HOH A 26 426 4 HOH HOH . 
L 6 HOH A 27 427 131 HOH HOH . 
L 6 HOH A 28 428 35 HOH HOH . 
L 6 HOH A 29 429 19 HOH HOH . 
L 6 HOH A 30 430 164 HOH HOH . 
L 6 HOH A 31 431 124 HOH HOH . 
L 6 HOH A 32 432 126 HOH HOH . 
L 6 HOH A 33 433 9 HOH HOH . 
L 6 HOH A 34 434 34 HOH HOH . 
L 6 HOH A 35 435 161 HOH HOH . 
L 6 HOH A 36 436 123 HOH HOH . 
L 6 HOH A 37 437 108 HOH HOH . 
L 6 HOH A 38 438 145 HOH HOH . 
L 6 HOH A 39 439 3 HOH HOH . 
L 6 HOH A 40 440 111 HOH HOH . 
L 6 HOH A 41 441 104 HOH HOH . 
L 6 HOH A 42 442 5 HOH HOH . 
L 6 HOH A 43 443 16 HOH HOH . 
L 6 HOH A 44 444 49 HOH HOH . 
L 6 HOH A 45 445 26 HOH HOH . 
L 6 HOH A 46 446 102 HOH HOH . 
L 6 HOH A 47 447 141 HOH HOH . 
L 6 HOH A 48 448 15 HOH HOH . 
L 6 HOH A 49 449 77 HOH HOH . 
L 6 HOH A 50 450 25 HOH HOH . 
L 6 HOH A 51 451 149 HOH HOH . 
L 6 HOH A 52 452 73 HOH HOH . 
L 6 HOH A 53 453 79 HOH HOH . 
L 6 HOH A 54 454 18 HOH HOH . 
L 6 HOH A 55 455 121 HOH HOH . 
L 6 HOH A 56 456 78 HOH HOH . 
L 6 HOH A 57 457 56 HOH HOH . 
L 6 HOH A 58 458 61 HOH HOH . 
L 6 HOH A 59 459 116 HOH HOH . 
L 6 HOH A 60 460 69 HOH HOH . 
L 6 HOH A 61 461 22 HOH HOH . 
L 6 HOH A 62 462 58 HOH HOH . 
L 6 HOH A 63 463 129 HOH HOH . 
L 6 HOH A 64 464 6 HOH HOH . 
L 6 HOH A 65 465 28 HOH HOH . 
L 6 HOH A 66 466 144 HOH HOH . 
L 6 HOH A 67 467 154 HOH HOH . 
L 6 HOH A 68 468 7 HOH HOH . 
L 6 HOH A 69 469 107 HOH HOH . 
L 6 HOH A 70 470 100 HOH HOH . 
L 6 HOH A 71 471 127 HOH HOH . 
L 6 HOH A 72 472 85 HOH HOH . 
L 6 HOH A 73 473 106 HOH HOH . 
L 6 HOH A 74 474 162 HOH HOH . 
L 6 HOH A 75 475 140 HOH HOH . 
L 6 HOH A 76 476 59 HOH HOH . 
L 6 HOH A 77 477 133 HOH HOH . 
L 6 HOH A 78 478 155 HOH HOH . 
L 6 HOH A 79 479 132 HOH HOH . 
L 6 HOH A 80 480 97 HOH HOH . 
L 6 HOH A 81 481 2 HOH HOH . 
M 6 HOH B 1 401 120 HOH HOH . 
M 6 HOH B 2 402 72 HOH HOH . 
M 6 HOH B 3 403 41 HOH HOH . 
M 6 HOH B 4 404 103 HOH HOH . 
M 6 HOH B 5 405 43 HOH HOH . 
M 6 HOH B 6 406 168 HOH HOH . 
M 6 HOH B 7 407 142 HOH HOH . 
M 6 HOH B 8 408 52 HOH HOH . 
M 6 HOH B 9 409 159 HOH HOH . 
M 6 HOH B 10 410 84 HOH HOH . 
M 6 HOH B 11 411 13 HOH HOH . 
M 6 HOH B 12 412 130 HOH HOH . 
M 6 HOH B 13 413 65 HOH HOH . 
M 6 HOH B 14 414 32 HOH HOH . 
M 6 HOH B 15 415 70 HOH HOH . 
M 6 HOH B 16 416 138 HOH HOH . 
M 6 HOH B 17 417 21 HOH HOH . 
M 6 HOH B 18 418 101 HOH HOH . 
M 6 HOH B 19 419 68 HOH HOH . 
M 6 HOH B 20 420 88 HOH HOH . 
M 6 HOH B 21 421 169 HOH HOH . 
M 6 HOH B 22 422 125 HOH HOH . 
M 6 HOH B 23 423 76 HOH HOH . 
M 6 HOH B 24 424 89 HOH HOH . 
M 6 HOH B 25 425 66 HOH HOH . 
M 6 HOH B 26 426 47 HOH HOH . 
M 6 HOH B 27 427 33 HOH HOH . 
M 6 HOH B 28 428 87 HOH HOH . 
M 6 HOH B 29 429 8 HOH HOH . 
M 6 HOH B 30 430 137 HOH HOH . 
M 6 HOH B 31 431 170 HOH HOH . 
M 6 HOH B 32 432 122 HOH HOH . 
M 6 HOH B 33 433 96 HOH HOH . 
M 6 HOH B 34 434 38 HOH HOH . 
M 6 HOH B 35 435 83 HOH HOH . 
M 6 HOH B 36 436 55 HOH HOH . 
M 6 HOH B 37 437 143 HOH HOH . 
M 6 HOH B 38 438 20 HOH HOH . 
M 6 HOH B 39 439 117 HOH HOH . 
M 6 HOH B 40 440 44 HOH HOH . 
M 6 HOH B 41 441 12 HOH HOH . 
M 6 HOH B 42 442 23 HOH HOH . 
M 6 HOH B 43 443 46 HOH HOH . 
M 6 HOH B 44 444 24 HOH HOH . 
M 6 HOH B 45 445 105 HOH HOH . 
M 6 HOH B 46 446 63 HOH HOH . 
M 6 HOH B 47 447 57 HOH HOH . 
M 6 HOH B 48 448 51 HOH HOH . 
M 6 HOH B 49 449 48 HOH HOH . 
M 6 HOH B 50 450 134 HOH HOH . 
M 6 HOH B 51 451 27 HOH HOH . 
M 6 HOH B 52 452 74 HOH HOH . 
M 6 HOH B 53 453 10 HOH HOH . 
M 6 HOH B 54 454 113 HOH HOH . 
M 6 HOH B 55 455 153 HOH HOH . 
M 6 HOH B 56 456 29 HOH HOH . 
M 6 HOH B 57 457 93 HOH HOH . 
M 6 HOH B 58 458 54 HOH HOH . 
M 6 HOH B 59 459 60 HOH HOH . 
M 6 HOH B 60 460 17 HOH HOH . 
M 6 HOH B 61 461 112 HOH HOH . 
M 6 HOH B 62 462 62 HOH HOH . 
M 6 HOH B 63 463 92 HOH HOH . 
M 6 HOH B 64 464 39 HOH HOH . 
M 6 HOH B 65 465 90 HOH HOH . 
M 6 HOH B 66 466 82 HOH HOH . 
M 6 HOH B 67 467 1 HOH HOH . 
M 6 HOH B 68 468 110 HOH HOH . 
M 6 HOH B 69 469 147 HOH HOH . 
M 6 HOH B 70 470 167 HOH HOH . 
M 6 HOH B 71 471 158 HOH HOH . 
M 6 HOH B 72 472 156 HOH HOH . 
M 6 HOH B 73 473 163 HOH HOH . 
M 6 HOH B 74 474 91 HOH HOH . 
M 6 HOH B 75 475 165 HOH HOH . 
M 6 HOH B 76 476 166 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . J 5 64.537 -36.061 -14.896 1 74.14 ? N1 IMD 304 B 1 
HETATM 2 C C2 IMD . . . J 5 64.529 -37.369 -15.168 1 76.84 ? C2 IMD 304 B 1 
HETATM 3 N N3 IMD . . . J 5 64.49 -37.511 -16.48 1 82.43 ? N3 IMD 304 B 1 
HETATM 4 C C4 IMD . . . J 5 64.331 -36.282 -17.057 1 76.86 ? C4 IMD 304 B 1 
HETATM 5 C C5 IMD . . . J 5 64.35 -35.374 -16.067 1 76.69 ? C5 IMD 304 B 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           257 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#