data_7XWW # _model_server_result.job_id yGjdMcOBv_G9OMMapdzfVw _model_server_result.datetime_utc '2024-11-13 10:50:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xww # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 7XWW # _exptl.entry_id 7XWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 96.64 _cell.angle_beta 100.83 _cell.angle_gamma 110.72 _cell.entry_id 7XWW _cell.length_a 43.87 _cell.length_b 61.669 _cell.length_c 88.332 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G 1 1 C,D,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 7XWW _atom_sites.fract_transf_matrix[1][1] 0.022795 _atom_sites.fract_transf_matrix[1][2] 0.00862 _atom_sites.fract_transf_matrix[1][3] 0.006193 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017336 _atom_sites.fract_transf_matrix[2][3] 0.003505 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FMN B 1 301 361 FMN FMN . F 3 I5O A 1 301 301 I5O CJN . G 2 FMN A 1 302 360 FMN FMN . H 2 FMN H 1 301 360 FMN FMN . I 2 FMN I 1 301 361 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . H 2 -0.553 51.267 -48.28 1 68.11 ? N1 FMN 301 H 1 HETATM 2 C C2 FMN . . . H 2 -1.276 52.022 -49.182 1 52.29 ? C2 FMN 301 H 1 HETATM 3 O O2 FMN . . . H 2 -0.811 53.076 -49.612 1 45.54 ? O2 FMN 301 H 1 HETATM 4 N N3 FMN . . . H 2 -2.52 51.596 -49.602 1 56.95 ? N3 FMN 301 H 1 HETATM 5 C C4 FMN . . . H 2 -3.045 50.413 -49.121 1 74.82 ? C4 FMN 301 H 1 HETATM 6 O O4 FMN . . . H 2 -4.153 50.035 -49.497 1 80.58 ? O4 FMN 301 H 1 HETATM 7 C C4A FMN . . . H 2 -2.322 49.648 -48.213 1 77.85 ? C4A FMN 301 H 1 HETATM 8 N N5 FMN . . . H 2 -2.843 48.463 -47.728 1 77.41 ? N5 FMN 301 H 1 HETATM 9 C C5A FMN . . . H 2 -2.121 47.704 -46.827 1 76.67 ? C5A FMN 301 H 1 HETATM 10 C C6 FMN . . . H 2 -2.635 46.506 -46.331 1 71.11 ? C6 FMN 301 H 1 HETATM 11 C C7 FMN . . . H 2 -1.89 45.756 -45.421 1 49.1 ? C7 FMN 301 H 1 HETATM 12 C C7M FMN . . . H 2 -2.402 44.461 -44.865 1 33.15 ? C7M FMN 301 H 1 HETATM 13 C C8 FMN . . . H 2 -0.645 46.203 -45.013 1 56.54 ? C8 FMN 301 H 1 HETATM 14 C C8M FMN . . . H 2 0.158 45.402 -44.037 1 53.75 ? C8M FMN 301 H 1 HETATM 15 C C9 FMN . . . H 2 -0.137 47.388 -45.508 1 59.98 ? C9 FMN 301 H 1 HETATM 16 C C9A FMN . . . H 2 -0.868 48.145 -46.411 1 68.27 ? C9A FMN 301 H 1 HETATM 17 N N10 FMN . . . H 2 -0.349 49.334 -46.887 1 64.68 ? N10 FMN 301 H 1 HETATM 18 C C10 FMN . . . H 2 -1.069 50.08 -47.797 1 74.18 ? C10 FMN 301 H 1 HETATM 19 C C1' FMN . . . H 2 1.005 49.823 -46.459 1 49.65 ? C1' FMN 301 H 1 HETATM 20 C C2' FMN . . . H 2 0.983 50.435 -45.059 1 40.12 ? C2' FMN 301 H 1 HETATM 21 O O2' FMN . . . H 2 0.438 51.731 -45.126 1 35.39 ? O2' FMN 301 H 1 HETATM 22 C C3' FMN . . . H 2 2.394 50.485 -44.485 1 34.89 ? C3' FMN 301 H 1 HETATM 23 O O3' FMN . . . H 2 2.886 49.177 -44.284 1 53.15 ? O3' FMN 301 H 1 HETATM 24 C C4' FMN . . . H 2 2.465 51.276 -43.185 1 40.17 ? C4' FMN 301 H 1 HETATM 25 O O4' FMN . . . H 2 2.05 52.605 -43.407 1 74.52 ? O4' FMN 301 H 1 HETATM 26 C C5' FMN . . . H 2 3.872 51.278 -42.589 1 24.4 ? C5' FMN 301 H 1 HETATM 27 O O5' FMN . . . H 2 4.805 51.552 -43.616 1 16.66 ? O5' FMN 301 H 1 HETATM 28 P P FMN . . . H 2 6.172 50.705 -43.746 1 31.22 ? P FMN 301 H 1 HETATM 29 O O1P FMN . . . H 2 7.073 51.388 -44.746 1 32.44 ? O1P FMN 301 H 1 HETATM 30 O O2P FMN . . . H 2 5.913 49.264 -44.116 1 40.29 -1 O2P FMN 301 H 1 HETATM 31 O O3P FMN . . . H 2 6.879 50.763 -42.414 1 38.46 ? O3P FMN 301 H 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 31 #