data_7XWW # _model_server_result.job_id hpEhLu2y83EIdly5nxOEyw _model_server_result.datetime_utc '2024-11-13 10:50:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xww # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 7XWW # _exptl.entry_id 7XWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 96.64 _cell.angle_beta 100.83 _cell.angle_gamma 110.72 _cell.entry_id 7XWW _cell.length_a 43.87 _cell.length_b 61.669 _cell.length_c 88.332 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G 1 1 C,D,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 7XWW _atom_sites.fract_transf_matrix[1][1] 0.022795 _atom_sites.fract_transf_matrix[1][2] 0.00862 _atom_sites.fract_transf_matrix[1][3] 0.006193 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017336 _atom_sites.fract_transf_matrix[2][3] 0.003505 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FMN B 1 301 361 FMN FMN . F 3 I5O A 1 301 301 I5O CJN . G 2 FMN A 1 302 360 FMN FMN . H 2 FMN H 1 301 360 FMN FMN . I 2 FMN I 1 301 361 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . I 2 2.564 22.667 -35.931 1 47.25 ? N1 FMN 301 I 1 HETATM 2 C C2 FMN . . . I 2 2.307 21.908 -34.803 1 47.11 ? C2 FMN 301 I 1 HETATM 3 O O2 FMN . . . I 2 2.896 20.834 -34.658 1 42.85 ? O2 FMN 301 I 1 HETATM 4 N N3 FMN . . . I 2 1.403 22.348 -33.853 1 40.32 ? N3 FMN 301 I 1 HETATM 5 C C4 FMN . . . I 2 0.752 23.555 -34.032 1 9.9 ? C4 FMN 301 I 1 HETATM 6 O O4 FMN . . . I 2 -0.05 23.93 -33.174 1 7.44 ? O4 FMN 301 I 1 HETATM 7 C C4A FMN . . . I 2 1.011 24.323 -35.176 1 33.53 ? C4A FMN 301 I 1 HETATM 8 N N5 FMN . . . I 2 0.383 25.535 -35.396 1 44.9 ? N5 FMN 301 I 1 HETATM 9 C C5A FMN . . . I 2 0.655 26.28 -36.537 1 54.36 ? C5A FMN 301 I 1 HETATM 10 C C6 FMN . . . I 2 0.057 27.501 -36.736 1 55.38 ? C6 FMN 301 I 1 HETATM 11 C C7 FMN . . . I 2 0.256 28.268 -37.854 1 48.69 ? C7 FMN 301 I 1 HETATM 12 C C7M FMN . . . I 2 -0.475 29.568 -37.984 1 44.95 ? C7M FMN 301 I 1 HETATM 13 C C8 FMN . . . I 2 1.152 27.848 -38.809 1 43.35 ? C8 FMN 301 I 1 HETATM 14 C C8M FMN . . . I 2 1.403 28.704 -40.017 1 28.6 ? C8M FMN 301 I 1 HETATM 15 C C9 FMN . . . I 2 1.808 26.635 -38.624 1 54.56 ? C9 FMN 301 I 1 HETATM 16 C C9A FMN . . . I 2 1.558 25.847 -37.486 1 55.6 ? C9A FMN 301 I 1 HETATM 17 N N10 FMN . . . I 2 2.176 24.624 -37.269 1 50.16 ? N10 FMN 301 I 1 HETATM 18 C C10 FMN . . . I 2 1.925 23.876 -36.126 1 39.96 ? C10 FMN 301 I 1 HETATM 19 C C1' FMN . . . I 2 3.172 24.136 -38.262 1 55.25 ? C1' FMN 301 I 1 HETATM 20 C C2' FMN . . . I 2 2.56 23.547 -39.516 1 51.23 ? C2' FMN 301 I 1 HETATM 21 O O2' FMN . . . I 2 2.248 22.189 -39.308 1 42.36 ? O2' FMN 301 I 1 HETATM 22 C C3' FMN . . . I 2 3.653 23.691 -40.558 1 58.62 ? C3' FMN 301 I 1 HETATM 23 O O3' FMN . . . I 2 3.806 25.065 -40.839 1 62.95 ? O3' FMN 301 I 1 HETATM 24 C C4' FMN . . . I 2 3.364 22.976 -41.861 1 55.58 ? C4' FMN 301 I 1 HETATM 25 O O4' FMN . . . I 2 3.326 21.592 -41.614 1 79.26 ? O4' FMN 301 I 1 HETATM 26 C C5' FMN . . . I 2 4.508 23.311 -42.804 1 32.21 ? C5' FMN 301 I 1 HETATM 27 O O5' FMN . . . I 2 5.718 23.116 -42.106 1 33.61 ? O5' FMN 301 I 1 HETATM 28 P P FMN . . . I 2 6.865 24.247 -42.102 1 54.05 ? P FMN 301 I 1 HETATM 29 O O1P FMN . . . I 2 8.143 23.612 -41.609 1 58.01 ? O1P FMN 301 I 1 HETATM 30 O O2P FMN . . . I 2 6.472 25.371 -41.173 1 49.63 -1 O2P FMN 301 I 1 HETATM 31 O O3P FMN . . . I 2 7.064 24.79 -43.497 1 57.72 ? O3P FMN 301 I 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #