data_7XZO
#
_model_server_result.job_id            Q9HmT5ljh1S1PO3KvceavA 
_model_server_result.datetime_utc      '2024-10-15 02:17:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xzo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":602}' 
#
_entry.id    7XZO 
#
_exptl.entry_id    7XZO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.15 
_cell.angle_gamma         90 
_cell.entry_id            7XZO 
_cell.length_a            215.28 
_cell.length_b            115.1 
_cell.length_c            106.53 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XZO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,N,O,R,T 1 1 
B,D,G,H,I,J,K,L,M,P,Q,S,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 O N N 
? 3 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 100 A GLU 96 1_555 E K K . A K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.161 ? 
metalc ? metalc2 A O PRO 101 A PRO 97 1_555 E K K . A K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? 
metalc ? metalc3 A O ILE 127 A ILE 123 1_555 E K K . A K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? 
metalc ? metalc4 A O LEU 129 A LEU 125 1_555 E K K . A K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
metalc ? metalc5 E K K . A K 601 1_555 R O HOH . A HOH 716 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? 
metalc ? metalc6 B OE2 GLU 100 B GLU 96 1_555 G K K . B K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.073 ? 
metalc ? metalc7 B O PRO 101 B PRO 97 1_555 G K K . B K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? 
metalc ? metalc8 B O ILE 127 B ILE 123 1_555 G K K . B K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? 
metalc ? metalc9 B O LEU 129 B LEU 125 1_555 G K K . B K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? 
metalc ? metalc10 C OE2 GLU 100 C GLU 96 1_555 N K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.055 ? 
metalc ? metalc11 C O PRO 101 C PRO 97 1_555 N K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? 
metalc ? metalc12 C O ILE 127 C ILE 123 1_555 N K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? 
metalc ? metalc13 C O LEU 129 C LEU 125 1_555 N K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? 
metalc ? metalc14 D OE2 GLU 100 D GLU 96 1_555 P K K . D K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.93 ? 
metalc ? metalc15 D O PRO 101 D PRO 97 1_555 P K K . D K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? 
metalc ? metalc16 D O ILE 127 D ILE 123 1_555 P K K . D K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? 
metalc ? metalc17 D O LEU 129 D LEU 125 1_555 P K K . D K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7XZO 
_atom_sites.fract_transf_matrix[1][1]    0.004645 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000256 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008688 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009401 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 K A 1 601 3 K K . 
F 3 ATP A 1 602 1 ATP ATP . 
G 2 K B 1 601 1 K K . 
H 3 ATP B 1 602 2 ATP ATP . 
I 4 BU3 B 1 603 2 BU3 BU3 . 
J 4 BU3 B 1 604 3 BU3 BU3 . 
K 4 BU3 B 1 605 4 BU3 BU3 . 
L 4 BU3 B 1 606 5 BU3 BU3 . 
M 4 BU3 B 1 607 6 BU3 BU3 . 
N 2 K C 1 601 4 K K . 
O 3 ATP C 1 602 4 ATP ATP . 
P 2 K D 1 601 2 K K . 
Q 3 ATP D 1 602 3 ATP ATP . 
R 5 HOH A 1 701 26 HOH HOH . 
R 5 HOH A 2 702 55 HOH HOH . 
R 5 HOH A 3 703 34 HOH HOH . 
R 5 HOH A 4 704 33 HOH HOH . 
R 5 HOH A 5 705 43 HOH HOH . 
R 5 HOH A 6 706 16 HOH HOH . 
R 5 HOH A 7 707 56 HOH HOH . 
R 5 HOH A 8 708 14 HOH HOH . 
R 5 HOH A 9 709 66 HOH HOH . 
R 5 HOH A 10 710 62 HOH HOH . 
R 5 HOH A 11 711 31 HOH HOH . 
R 5 HOH A 12 712 7 HOH HOH . 
R 5 HOH A 13 713 40 HOH HOH . 
R 5 HOH A 14 714 24 HOH HOH . 
R 5 HOH A 15 715 69 HOH HOH . 
R 5 HOH A 16 716 63 HOH HOH . 
R 5 HOH A 17 717 1 HOH HOH . 
R 5 HOH A 18 718 65 HOH HOH . 
R 5 HOH A 19 719 48 HOH HOH . 
R 5 HOH A 20 720 35 HOH HOH . 
R 5 HOH A 21 721 68 HOH HOH . 
S 5 HOH B 1 701 72 HOH HOH . 
S 5 HOH B 2 702 27 HOH HOH . 
S 5 HOH B 3 703 42 HOH HOH . 
S 5 HOH B 4 704 32 HOH HOH . 
S 5 HOH B 5 705 59 HOH HOH . 
S 5 HOH B 6 706 47 HOH HOH . 
S 5 HOH B 7 707 17 HOH HOH . 
S 5 HOH B 8 708 67 HOH HOH . 
S 5 HOH B 9 709 50 HOH HOH . 
S 5 HOH B 10 710 46 HOH HOH . 
S 5 HOH B 11 711 44 HOH HOH . 
S 5 HOH B 12 712 6 HOH HOH . 
S 5 HOH B 13 713 22 HOH HOH . 
S 5 HOH B 14 714 2 HOH HOH . 
S 5 HOH B 15 715 29 HOH HOH . 
S 5 HOH B 16 716 19 HOH HOH . 
S 5 HOH B 17 717 18 HOH HOH . 
S 5 HOH B 18 718 74 HOH HOH . 
S 5 HOH B 19 719 75 HOH HOH . 
S 5 HOH B 20 720 76 HOH HOH . 
S 5 HOH B 21 721 73 HOH HOH . 
S 5 HOH B 22 722 20 HOH HOH . 
S 5 HOH B 23 723 30 HOH HOH . 
S 5 HOH B 24 724 37 HOH HOH . 
T 5 HOH C 1 701 51 HOH HOH . 
T 5 HOH C 2 702 57 HOH HOH . 
T 5 HOH C 3 703 4 HOH HOH . 
T 5 HOH C 4 704 41 HOH HOH . 
T 5 HOH C 5 705 9 HOH HOH . 
T 5 HOH C 6 706 61 HOH HOH . 
T 5 HOH C 7 707 21 HOH HOH . 
T 5 HOH C 8 708 8 HOH HOH . 
T 5 HOH C 9 709 15 HOH HOH . 
T 5 HOH C 10 710 28 HOH HOH . 
T 5 HOH C 11 711 64 HOH HOH . 
T 5 HOH C 12 712 54 HOH HOH . 
T 5 HOH C 13 713 58 HOH HOH . 
T 5 HOH C 14 714 38 HOH HOH . 
T 5 HOH C 15 715 70 HOH HOH . 
T 5 HOH C 16 716 39 HOH HOH . 
U 5 HOH D 1 701 77 HOH HOH . 
U 5 HOH D 2 702 11 HOH HOH . 
U 5 HOH D 3 703 3 HOH HOH . 
U 5 HOH D 4 704 49 HOH HOH . 
U 5 HOH D 5 705 71 HOH HOH . 
U 5 HOH D 6 706 10 HOH HOH . 
U 5 HOH D 7 707 5 HOH HOH . 
U 5 HOH D 8 708 45 HOH HOH . 
U 5 HOH D 9 709 25 HOH HOH . 
U 5 HOH D 10 710 52 HOH HOH . 
U 5 HOH D 11 711 36 HOH HOH . 
U 5 HOH D 12 712 13 HOH HOH . 
U 5 HOH D 13 713 12 HOH HOH . 
U 5 HOH D 14 714 60 HOH HOH . 
U 5 HOH D 15 715 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . O 3 30.684 88.25 -3.709 1 91.99 ? PG ATP 602 C 1 
HETATM 2 O O1G ATP . . . O 3 30.907 88.399 -5.196 1 75.36 ? O1G ATP 602 C 1 
HETATM 3 O O2G ATP . . . O 3 31.164 86.933 -3.145 1 81.72 ? O2G ATP 602 C 1 
HETATM 4 O O3G ATP . . . O 3 29.321 88.686 -3.228 1 86.75 ? O3G ATP 602 C 1 
HETATM 5 P PB ATP . . . O 3 31.739 90.84 -3.595 1 74.92 ? PB ATP 602 C 1 
HETATM 6 O O1B ATP . . . O 3 32.164 91.731 -2.455 1 59.91 ? O1B ATP 602 C 1 
HETATM 7 O O2B ATP . . . O 3 30.444 91.127 -4.318 1 72.09 ? O2B ATP 602 C 1 
HETATM 8 O O3B ATP . . . O 3 31.696 89.322 -3.063 1 73.93 ? O3B ATP 602 C 1 
HETATM 9 P PA ATP . . . O 3 34.17 89.8 -4.711 1 62.28 ? PA ATP 602 C 1 
HETATM 10 O O1A ATP . . . O 3 33.74 88.392 -4.376 1 61.81 ? O1A ATP 602 C 1 
HETATM 11 O O2A ATP . . . O 3 35.334 90.398 -3.96 1 56.63 ? O2A ATP 602 C 1 
HETATM 12 O O3A ATP . . . O 3 32.917 90.819 -4.698 1 75.57 ? O3A ATP 602 C 1 
HETATM 13 O O5' ATP . . . O 3 34.501 89.78 -6.284 1 62.92 ? O5' ATP 602 C 1 
HETATM 14 C C5' ATP . . . O 3 33.844 88.819 -7.107 1 58.83 ? C5' ATP 602 C 1 
HETATM 15 C C4' ATP . . . O 3 34.601 88.664 -8.416 1 58.65 ? C4' ATP 602 C 1 
HETATM 16 O O4' ATP . . . O 3 34.957 89.948 -8.934 1 59.14 ? O4' ATP 602 C 1 
HETATM 17 C C3' ATP . . . O 3 35.891 87.888 -8.207 1 59.19 ? C3' ATP 602 C 1 
HETATM 18 O O3' ATP . . . O 3 35.818 86.635 -8.894 1 54.3 ? O3' ATP 602 C 1 
HETATM 19 C C2' ATP . . . O 3 36.993 88.742 -8.8 1 50.33 ? C2' ATP 602 C 1 
HETATM 20 O O2' ATP . . . O 3 37.74 87.987 -9.758 1 56.28 ? O2' ATP 602 C 1 
HETATM 21 C C1' ATP . . . O 3 36.28 89.904 -9.473 1 53.62 ? C1' ATP 602 C 1 
HETATM 22 N N9 ATP . . . O 3 37.003 91.175 -9.217 1 50.04 ? N9 ATP 602 C 1 
HETATM 23 C C8 ATP . . . O 3 37.1 91.814 -8.036 1 46.88 ? C8 ATP 602 C 1 
HETATM 24 N N7 ATP . . . O 3 37.837 92.949 -8.153 1 46.22 ? N7 ATP 602 C 1 
HETATM 25 C C5 ATP . . . O 3 38.229 93.046 -9.438 1 48.56 ? C5 ATP 602 C 1 
HETATM 26 C C6 ATP . . . O 3 39.03 93.998 -10.245 1 45.59 ? C6 ATP 602 C 1 
HETATM 27 N N6 ATP . . . O 3 39.577 95.105 -9.688 1 43.88 ? N6 ATP 602 C 1 
HETATM 28 N N1 ATP . . . O 3 39.196 93.723 -11.558 1 40.7 ? N1 ATP 602 C 1 
HETATM 29 C C2 ATP . . . O 3 38.659 92.628 -12.127 1 40.73 ? C2 ATP 602 C 1 
HETATM 30 N N3 ATP . . . O 3 37.924 91.724 -11.456 1 44.79 ? N3 ATP 602 C 1 
HETATM 31 C C4 ATP . . . O 3 37.678 91.873 -10.133 1 46.62 ? C4 ATP 602 C 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           63 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           522 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#