data_7XZQ
#
_model_server_result.job_id            f6hPkABtOPlnYDSzQOpb0g 
_model_server_result.datetime_utc      '2024-11-14 19:06:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7xzq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1404}' 
#
_entry.id    7XZQ 
#
_exptl.entry_id    7XZQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              90.121 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,4-BUTANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7XZQ 
_cell.length_a            53.29 
_cell.length_b            152.84 
_cell.length_c            98.96 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7XZQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 172 A ARG 180 1_555 A N TPO 173 A TPO 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale2 A C TPO 173 A TPO 181 1_555 A N VAL 174 A VAL 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale3 A C ASN 178 A ASN 186 1_555 A N TPO 179 A TPO 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 A C TPO 179 A TPO 187 1_555 A N PHE 180 A PHE 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale5 B C DHA 1 B DHA 1 1_555 B N TRP 2 B TRP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale6 B CA DHA 1 B DHA 1 1_555 B C BB9 15 B BB9 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.484 ? 
covale ? covale7 B CB DHA 1 B DHA 1 1_555 B CB DHA 16 B DHA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? 
covale ? covale8 B C LYS 10 B LYS 10 1_555 B N DHA 11 B DHA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale9 B C DHA 11 B DHA 11 1_555 B N DHA 12 B DHA 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale10 B C DHA 12 B DHA 12 1_555 B N GLY 13 B GLY 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale11 B C GLY 13 B GLY 13 1_555 B N DHA 14 B DHA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale12 B C DHA 14 B DHA 14 1_555 B N BB9 15 B BB9 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? 
covale ? covale13 B C DHA 14 B DHA 14 1_555 B SG BB9 15 B BB9 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
covale ? covale14 B C BB9 15 B BB9 15 1_555 B N DHA 16 B DHA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale15 B C DHA 16 B DHA 16 1_555 B N BB9 17 B BB9 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale16 B C DHA 16 B DHA 16 1_555 B SG BB9 17 B BB9 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
covale ? covale17 B C BB9 17 B BB9 17 1_555 B O MOH 18 B MOH 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 ? 
#
_chem_comp.formula           'C4 H10 O2' 
_chem_comp.formula_weight    90.121 
_chem_comp.id                BU1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,4-BUTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BU1 sing 81 n n 
C1 O5 BU1 sing 82 n n 
C1 H11 BU1 sing 83 n n 
C1 H12 BU1 sing 84 n n 
C2 C3 BU1 sing 85 n n 
C2 H21 BU1 sing 86 n n 
C2 H22 BU1 sing 87 n n 
C3 C4 BU1 sing 88 n n 
C3 H31 BU1 sing 89 n n 
C3 H32 BU1 sing 90 n n 
C4 O6 BU1 sing 91 n n 
C4 H41 BU1 sing 92 n n 
C4 H42 BU1 sing 93 n n 
O5 HO5 BU1 sing 94 n n 
O6 HO6 BU1 sing 95 n n 
#
_atom_sites.entry_id                     7XZQ 
_atom_sites.fract_transf_matrix[1][1]    0.018765 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006543 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010105 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 BU1 A 1 1401 401 BU1 BU1 . 
D 3 BU1 A 1 1402 403 BU1 BU1 . 
E 3 BU1 A 1 1403 404 BU1 BU1 . 
F 3 BU1 A 1 1404 405 BU1 BU1 . 
G 3 BU1 B 1 101 402 BU1 BU1 . 
H 4 HOH A 1 1501 72 HOH HOH . 
H 4 HOH A 2 1502 109 HOH HOH . 
H 4 HOH A 3 1503 81 HOH HOH . 
H 4 HOH A 4 1504 1 HOH HOH . 
H 4 HOH A 5 1505 25 HOH HOH . 
H 4 HOH A 6 1506 26 HOH HOH . 
H 4 HOH A 7 1507 125 HOH HOH . 
H 4 HOH A 8 1508 112 HOH HOH . 
H 4 HOH A 9 1509 71 HOH HOH . 
H 4 HOH A 10 1510 45 HOH HOH . 
H 4 HOH A 11 1511 102 HOH HOH . 
H 4 HOH A 12 1512 116 HOH HOH . 
H 4 HOH A 13 1513 69 HOH HOH . 
H 4 HOH A 14 1514 53 HOH HOH . 
H 4 HOH A 15 1515 18 HOH HOH . 
H 4 HOH A 16 1516 127 HOH HOH . 
H 4 HOH A 17 1517 123 HOH HOH . 
H 4 HOH A 18 1518 92 HOH HOH . 
H 4 HOH A 19 1519 61 HOH HOH . 
H 4 HOH A 20 1520 101 HOH HOH . 
H 4 HOH A 21 1521 29 HOH HOH . 
H 4 HOH A 22 1522 48 HOH HOH . 
H 4 HOH A 23 1523 62 HOH HOH . 
H 4 HOH A 24 1524 3 HOH HOH . 
H 4 HOH A 25 1525 110 HOH HOH . 
H 4 HOH A 26 1526 74 HOH HOH . 
H 4 HOH A 27 1527 4 HOH HOH . 
H 4 HOH A 28 1528 20 HOH HOH . 
H 4 HOH A 29 1529 83 HOH HOH . 
H 4 HOH A 30 1530 37 HOH HOH . 
H 4 HOH A 31 1531 132 HOH HOH . 
H 4 HOH A 32 1532 50 HOH HOH . 
H 4 HOH A 33 1533 35 HOH HOH . 
H 4 HOH A 34 1534 54 HOH HOH . 
H 4 HOH A 35 1535 82 HOH HOH . 
H 4 HOH A 36 1536 34 HOH HOH . 
H 4 HOH A 37 1537 70 HOH HOH . 
H 4 HOH A 38 1538 51 HOH HOH . 
H 4 HOH A 39 1539 97 HOH HOH . 
H 4 HOH A 40 1540 114 HOH HOH . 
H 4 HOH A 41 1541 5 HOH HOH . 
H 4 HOH A 42 1542 8 HOH HOH . 
H 4 HOH A 43 1543 13 HOH HOH . 
H 4 HOH A 44 1544 11 HOH HOH . 
H 4 HOH A 45 1545 9 HOH HOH . 
H 4 HOH A 46 1546 86 HOH HOH . 
H 4 HOH A 47 1547 30 HOH HOH . 
H 4 HOH A 48 1548 89 HOH HOH . 
H 4 HOH A 49 1549 76 HOH HOH . 
H 4 HOH A 50 1550 22 HOH HOH . 
H 4 HOH A 51 1551 88 HOH HOH . 
H 4 HOH A 52 1552 119 HOH HOH . 
H 4 HOH A 53 1553 58 HOH HOH . 
H 4 HOH A 54 1554 31 HOH HOH . 
H 4 HOH A 55 1555 128 HOH HOH . 
H 4 HOH A 56 1556 16 HOH HOH . 
H 4 HOH A 57 1557 33 HOH HOH . 
H 4 HOH A 58 1558 23 HOH HOH . 
H 4 HOH A 59 1559 63 HOH HOH . 
H 4 HOH A 60 1560 38 HOH HOH . 
H 4 HOH A 61 1561 12 HOH HOH . 
H 4 HOH A 62 1562 46 HOH HOH . 
H 4 HOH A 63 1563 66 HOH HOH . 
H 4 HOH A 64 1564 85 HOH HOH . 
H 4 HOH A 65 1565 43 HOH HOH . 
H 4 HOH A 66 1566 117 HOH HOH . 
H 4 HOH A 67 1567 2 HOH HOH . 
H 4 HOH A 68 1568 42 HOH HOH . 
H 4 HOH A 69 1569 115 HOH HOH . 
H 4 HOH A 70 1570 105 HOH HOH . 
H 4 HOH A 71 1571 90 HOH HOH . 
H 4 HOH A 72 1572 15 HOH HOH . 
H 4 HOH A 73 1573 67 HOH HOH . 
H 4 HOH A 74 1574 10 HOH HOH . 
H 4 HOH A 75 1575 99 HOH HOH . 
H 4 HOH A 76 1576 95 HOH HOH . 
H 4 HOH A 77 1577 80 HOH HOH . 
H 4 HOH A 78 1578 17 HOH HOH . 
H 4 HOH A 79 1579 52 HOH HOH . 
H 4 HOH A 80 1580 121 HOH HOH . 
H 4 HOH A 81 1581 129 HOH HOH . 
H 4 HOH A 82 1582 57 HOH HOH . 
H 4 HOH A 83 1583 103 HOH HOH . 
H 4 HOH A 84 1584 39 HOH HOH . 
H 4 HOH A 85 1585 49 HOH HOH . 
H 4 HOH A 86 1586 113 HOH HOH . 
H 4 HOH A 87 1587 56 HOH HOH . 
H 4 HOH A 88 1588 21 HOH HOH . 
H 4 HOH A 89 1589 65 HOH HOH . 
H 4 HOH A 90 1590 24 HOH HOH . 
H 4 HOH A 91 1591 75 HOH HOH . 
H 4 HOH A 92 1592 100 HOH HOH . 
H 4 HOH A 93 1593 47 HOH HOH . 
H 4 HOH A 94 1594 59 HOH HOH . 
H 4 HOH A 95 1595 60 HOH HOH . 
H 4 HOH A 96 1596 28 HOH HOH . 
H 4 HOH A 97 1597 27 HOH HOH . 
H 4 HOH A 98 1598 6 HOH HOH . 
H 4 HOH A 99 1599 77 HOH HOH . 
H 4 HOH A 100 1600 106 HOH HOH . 
H 4 HOH A 101 1601 108 HOH HOH . 
H 4 HOH A 102 1602 7 HOH HOH . 
H 4 HOH A 103 1603 78 HOH HOH . 
H 4 HOH A 104 1604 32 HOH HOH . 
H 4 HOH A 105 1605 73 HOH HOH . 
H 4 HOH A 106 1606 107 HOH HOH . 
H 4 HOH A 107 1607 84 HOH HOH . 
H 4 HOH A 108 1608 120 HOH HOH . 
H 4 HOH A 109 1609 122 HOH HOH . 
H 4 HOH A 110 1610 104 HOH HOH . 
H 4 HOH A 111 1611 44 HOH HOH . 
H 4 HOH A 112 1612 96 HOH HOH . 
H 4 HOH A 113 1613 94 HOH HOH . 
H 4 HOH A 114 1614 91 HOH HOH . 
H 4 HOH A 115 1615 41 HOH HOH . 
H 4 HOH A 116 1616 79 HOH HOH . 
H 4 HOH A 117 1617 93 HOH HOH . 
H 4 HOH A 118 1618 40 HOH HOH . 
H 4 HOH A 119 1619 98 HOH HOH . 
H 4 HOH A 120 1620 131 HOH HOH . 
H 4 HOH A 121 1621 68 HOH HOH . 
H 4 HOH A 122 1622 87 HOH HOH . 
I 4 HOH B 1 201 126 HOH HOH . 
I 4 HOH B 2 202 111 HOH HOH . 
I 4 HOH B 3 203 124 HOH HOH . 
I 4 HOH B 4 204 14 HOH HOH . 
I 4 HOH B 5 205 19 HOH HOH . 
I 4 HOH B 6 206 36 HOH HOH . 
I 4 HOH B 7 207 55 HOH HOH . 
I 4 HOH B 8 208 64 HOH HOH . 
I 4 HOH B 9 209 130 HOH HOH . 
I 4 HOH B 10 210 118 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BU1 . . . F 3 17.98 11.019 -2.304 1 43.17 ? C1 BU1 1404 A 1 
HETATM 2 C C2 BU1 . . . F 3 17.733 9.515 -2.438 1 40.69 ? C2 BU1 1404 A 1 
HETATM 3 C C3 BU1 . . . F 3 16.234 9.236 -2.534 1 42.74 ? C3 BU1 1404 A 1 
HETATM 4 C C4 BU1 . . . F 3 15.923 7.924 -3.249 1 46.43 ? C4 BU1 1404 A 1 
HETATM 5 O O5 BU1 . . . F 3 17.866 11.386 -0.943 1 42.24 ? O5 BU1 1404 A 1 
HETATM 6 O O6 BU1 . . . F 3 14.599 7.985 -3.723 1 56.56 ? O6 BU1 1404 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           454 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#