data_7XZU # _model_server_result.job_id 2AxlgL0m77LVQXveUY3ySw _model_server_result.datetime_utc '2024-11-29 08:57:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xzu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7XZU # _exptl.entry_id 7XZU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 354.32 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-3-phenyl-propanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XZU _cell.length_a 67.402 _cell.length_b 67.402 _cell.length_c 140.766 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XZU _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C16 H14 N6 O4' _chem_comp.formula_weight 354.32 _chem_comp.id IEK _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-3-phenyl-propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-D-tyrosine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OXT C IEK doub 152 n n CB CG IEK sing 153 n n CB CA IEK sing 154 n n C O IEK sing 155 n n C CA IEK sing 156 n n CD2 CG IEK doub 157 n y CD2 CE2 IEK sing 158 n y CG CD1 IEK sing 159 n y CA N IEK sing 160 n n CE2 CZ IEK doub 161 n y CD1 CE1 IEK doub 162 n y N CAL IEK sing 163 n n CZ CE1 IEK sing 164 n y CAL OAQ IEK doub 165 n n CAL C7 IEK sing 166 n n N8 C7 IEK sing 167 n y N8 C8A IEK doub 168 n y C7 C6 IEK doub 169 n y N1 C8A IEK sing 170 n n N1 C2 IEK doub 171 n n C8A C4A IEK sing 172 n y N2 C2 IEK sing 173 n n C6 N5 IEK sing 174 n y C2 N3 IEK sing 175 n n C4A N5 IEK doub 176 n y C4A C4 IEK sing 177 n n N3 C4 IEK sing 178 n n C4 O4 IEK doub 179 n n N H1 IEK sing 180 n n O H2 IEK sing 181 n n C6 H3 IEK sing 182 n n CD1 H4 IEK sing 183 n n CE1 H5 IEK sing 184 n n CZ H6 IEK sing 185 n n CE2 H7 IEK sing 186 n n CD2 H8 IEK sing 187 n n CB H9 IEK sing 188 n n CB H10 IEK sing 189 n n CA H11 IEK sing 190 n n N2 H12 IEK sing 191 n n N2 H13 IEK sing 192 n n N3 H14 IEK sing 193 n n # _atom_sites.entry_id 7XZU _atom_sites.fract_transf_matrix[1][1] 0.014836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014836 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007104 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IEK A 1 501 501 IEK 7LF . C 2 IEK A 1 502 502 IEK 7LF . D 3 SO4 A 1 503 601 SO4 SO4 . E 3 SO4 A 1 504 602 SO4 SO4 . F 4 HOH A 1 601 168 HOH HOH . F 4 HOH A 2 602 14 HOH HOH . F 4 HOH A 3 603 98 HOH HOH . F 4 HOH A 4 604 3 HOH HOH . F 4 HOH A 5 605 116 HOH HOH . F 4 HOH A 6 606 217 HOH HOH . F 4 HOH A 7 607 31 HOH HOH . F 4 HOH A 8 608 32 HOH HOH . F 4 HOH A 9 609 231 HOH HOH . F 4 HOH A 10 610 28 HOH HOH . F 4 HOH A 11 611 185 HOH HOH . F 4 HOH A 12 612 35 HOH HOH . F 4 HOH A 13 613 85 HOH HOH . F 4 HOH A 14 614 148 HOH HOH . F 4 HOH A 15 615 108 HOH HOH . F 4 HOH A 16 616 9 HOH HOH . F 4 HOH A 17 617 182 HOH HOH . F 4 HOH A 18 618 42 HOH HOH . F 4 HOH A 19 619 25 HOH HOH . F 4 HOH A 20 620 17 HOH HOH . F 4 HOH A 21 621 237 HOH HOH . F 4 HOH A 22 622 156 HOH HOH . F 4 HOH A 23 623 29 HOH HOH . F 4 HOH A 24 624 218 HOH HOH . F 4 HOH A 25 625 37 HOH HOH . F 4 HOH A 26 626 155 HOH HOH . F 4 HOH A 27 627 10 HOH HOH . F 4 HOH A 28 628 45 HOH HOH . F 4 HOH A 29 629 69 HOH HOH . F 4 HOH A 30 630 38 HOH HOH . F 4 HOH A 31 631 111 HOH HOH . F 4 HOH A 32 632 51 HOH HOH . F 4 HOH A 33 633 172 HOH HOH . F 4 HOH A 34 634 161 HOH HOH . F 4 HOH A 35 635 66 HOH HOH . F 4 HOH A 36 636 133 HOH HOH . F 4 HOH A 37 637 73 HOH HOH . F 4 HOH A 38 638 216 HOH HOH . F 4 HOH A 39 639 53 HOH HOH . F 4 HOH A 40 640 63 HOH HOH . F 4 HOH A 41 641 13 HOH HOH . F 4 HOH A 42 642 220 HOH HOH . F 4 HOH A 43 643 2 HOH HOH . F 4 HOH A 44 644 232 HOH HOH . F 4 HOH A 45 645 74 HOH HOH . F 4 HOH A 46 646 191 HOH HOH . F 4 HOH A 47 647 43 HOH HOH . F 4 HOH A 48 648 54 HOH HOH . F 4 HOH A 49 649 27 HOH HOH . F 4 HOH A 50 650 68 HOH HOH . F 4 HOH A 51 651 4 HOH HOH . F 4 HOH A 52 652 61 HOH HOH . F 4 HOH A 53 653 159 HOH HOH . F 4 HOH A 54 654 24 HOH HOH . F 4 HOH A 55 655 12 HOH HOH . F 4 HOH A 56 656 1 HOH HOH . F 4 HOH A 57 657 206 HOH HOH . F 4 HOH A 58 658 221 HOH HOH . F 4 HOH A 59 659 128 HOH HOH . F 4 HOH A 60 660 57 HOH HOH . F 4 HOH A 61 661 55 HOH HOH . F 4 HOH A 62 662 18 HOH HOH . F 4 HOH A 63 663 36 HOH HOH . F 4 HOH A 64 664 7 HOH HOH . F 4 HOH A 65 665 56 HOH HOH . F 4 HOH A 66 666 171 HOH HOH . F 4 HOH A 67 667 83 HOH HOH . F 4 HOH A 68 668 49 HOH HOH . F 4 HOH A 69 669 16 HOH HOH . F 4 HOH A 70 670 60 HOH HOH . F 4 HOH A 71 671 193 HOH HOH . F 4 HOH A 72 672 19 HOH HOH . F 4 HOH A 73 673 105 HOH HOH . F 4 HOH A 74 674 135 HOH HOH . F 4 HOH A 75 675 34 HOH HOH . F 4 HOH A 76 676 96 HOH HOH . F 4 HOH A 77 677 72 HOH HOH . F 4 HOH A 78 678 41 HOH HOH . F 4 HOH A 79 679 93 HOH HOH . F 4 HOH A 80 680 11 HOH HOH . F 4 HOH A 81 681 113 HOH HOH . F 4 HOH A 82 682 167 HOH HOH . F 4 HOH A 83 683 158 HOH HOH . F 4 HOH A 84 684 120 HOH HOH . F 4 HOH A 85 685 78 HOH HOH . F 4 HOH A 86 686 40 HOH HOH . F 4 HOH A 87 687 126 HOH HOH . F 4 HOH A 88 688 8 HOH HOH . F 4 HOH A 89 689 97 HOH HOH . F 4 HOH A 90 690 47 HOH HOH . F 4 HOH A 91 691 162 HOH HOH . F 4 HOH A 92 692 115 HOH HOH . F 4 HOH A 93 693 21 HOH HOH . F 4 HOH A 94 694 86 HOH HOH . F 4 HOH A 95 695 39 HOH HOH . F 4 HOH A 96 696 99 HOH HOH . F 4 HOH A 97 697 70 HOH HOH . F 4 HOH A 98 698 33 HOH HOH . F 4 HOH A 99 699 59 HOH HOH . F 4 HOH A 100 700 87 HOH HOH . F 4 HOH A 101 701 210 HOH HOH . F 4 HOH A 102 702 190 HOH HOH . F 4 HOH A 103 703 160 HOH HOH . F 4 HOH A 104 704 152 HOH HOH . F 4 HOH A 105 705 75 HOH HOH . F 4 HOH A 106 706 153 HOH HOH . F 4 HOH A 107 707 200 HOH HOH . F 4 HOH A 108 708 94 HOH HOH . F 4 HOH A 109 709 62 HOH HOH . F 4 HOH A 110 710 184 HOH HOH . F 4 HOH A 111 711 26 HOH HOH . F 4 HOH A 112 712 124 HOH HOH . F 4 HOH A 113 713 142 HOH HOH . F 4 HOH A 114 714 6 HOH HOH . F 4 HOH A 115 715 227 HOH HOH . F 4 HOH A 116 716 109 HOH HOH . F 4 HOH A 117 717 145 HOH HOH . F 4 HOH A 118 718 92 HOH HOH . F 4 HOH A 119 719 81 HOH HOH . F 4 HOH A 120 720 146 HOH HOH . F 4 HOH A 121 721 125 HOH HOH . F 4 HOH A 122 722 84 HOH HOH . F 4 HOH A 123 723 30 HOH HOH . F 4 HOH A 124 724 157 HOH HOH . F 4 HOH A 125 725 131 HOH HOH . F 4 HOH A 126 726 235 HOH HOH . F 4 HOH A 127 727 192 HOH HOH . F 4 HOH A 128 728 188 HOH HOH . F 4 HOH A 129 729 22 HOH HOH . F 4 HOH A 130 730 90 HOH HOH . F 4 HOH A 131 731 71 HOH HOH . F 4 HOH A 132 732 100 HOH HOH . F 4 HOH A 133 733 179 HOH HOH . F 4 HOH A 134 734 154 HOH HOH . F 4 HOH A 135 735 80 HOH HOH . F 4 HOH A 136 736 176 HOH HOH . F 4 HOH A 137 737 137 HOH HOH . F 4 HOH A 138 738 201 HOH HOH . F 4 HOH A 139 739 178 HOH HOH . F 4 HOH A 140 740 123 HOH HOH . F 4 HOH A 141 741 143 HOH HOH . F 4 HOH A 142 742 187 HOH HOH . F 4 HOH A 143 743 88 HOH HOH . F 4 HOH A 144 744 89 HOH HOH . F 4 HOH A 145 745 177 HOH HOH . F 4 HOH A 146 746 181 HOH HOH . F 4 HOH A 147 747 23 HOH HOH . F 4 HOH A 148 748 95 HOH HOH . F 4 HOH A 149 749 76 HOH HOH . F 4 HOH A 150 750 239 HOH HOH . F 4 HOH A 151 751 211 HOH HOH . F 4 HOH A 152 752 112 HOH HOH . F 4 HOH A 153 753 20 HOH HOH . F 4 HOH A 154 754 132 HOH HOH . F 4 HOH A 155 755 224 HOH HOH . F 4 HOH A 156 756 65 HOH HOH . F 4 HOH A 157 757 138 HOH HOH . F 4 HOH A 158 758 52 HOH HOH . F 4 HOH A 159 759 228 HOH HOH . F 4 HOH A 160 760 50 HOH HOH . F 4 HOH A 161 761 122 HOH HOH . F 4 HOH A 162 762 213 HOH HOH . F 4 HOH A 163 763 209 HOH HOH . F 4 HOH A 164 764 139 HOH HOH . F 4 HOH A 165 765 208 HOH HOH . F 4 HOH A 166 766 238 HOH HOH . F 4 HOH A 167 767 233 HOH HOH . F 4 HOH A 168 768 110 HOH HOH . F 4 HOH A 169 769 79 HOH HOH . F 4 HOH A 170 770 222 HOH HOH . F 4 HOH A 171 771 183 HOH HOH . F 4 HOH A 172 772 229 HOH HOH . F 4 HOH A 173 773 225 HOH HOH . F 4 HOH A 174 774 169 HOH HOH . F 4 HOH A 175 775 230 HOH HOH . F 4 HOH A 176 776 174 HOH HOH . F 4 HOH A 177 777 240 HOH HOH . F 4 HOH A 178 778 48 HOH HOH . F 4 HOH A 179 779 219 HOH HOH . F 4 HOH A 180 780 186 HOH HOH . F 4 HOH A 181 781 82 HOH HOH . F 4 HOH A 182 782 46 HOH HOH . F 4 HOH A 183 783 189 HOH HOH . F 4 HOH A 184 784 44 HOH HOH . F 4 HOH A 185 785 64 HOH HOH . F 4 HOH A 186 786 15 HOH HOH . F 4 HOH A 187 787 130 HOH HOH . F 4 HOH A 188 788 67 HOH HOH . F 4 HOH A 189 789 170 HOH HOH . F 4 HOH A 190 790 164 HOH HOH . F 4 HOH A 191 791 166 HOH HOH . F 4 HOH A 192 792 175 HOH HOH . F 4 HOH A 193 793 5 HOH HOH . F 4 HOH A 194 794 165 HOH HOH . F 4 HOH A 195 795 195 HOH HOH . F 4 HOH A 196 796 104 HOH HOH . F 4 HOH A 197 797 236 HOH HOH . F 4 HOH A 198 798 198 HOH HOH . F 4 HOH A 199 799 223 HOH HOH . F 4 HOH A 200 800 121 HOH HOH . F 4 HOH A 201 801 163 HOH HOH . F 4 HOH A 202 802 58 HOH HOH . F 4 HOH A 203 803 127 HOH HOH . F 4 HOH A 204 804 117 HOH HOH . F 4 HOH A 205 805 149 HOH HOH . F 4 HOH A 206 806 77 HOH HOH . F 4 HOH A 207 807 212 HOH HOH . F 4 HOH A 208 808 150 HOH HOH . F 4 HOH A 209 809 180 HOH HOH . F 4 HOH A 210 810 114 HOH HOH . F 4 HOH A 211 811 197 HOH HOH . F 4 HOH A 212 812 129 HOH HOH . F 4 HOH A 213 813 144 HOH HOH . F 4 HOH A 214 814 215 HOH HOH . F 4 HOH A 215 815 194 HOH HOH . F 4 HOH A 216 816 151 HOH HOH . F 4 HOH A 217 817 203 HOH HOH . F 4 HOH A 218 818 134 HOH HOH . F 4 HOH A 219 819 234 HOH HOH . F 4 HOH A 220 820 226 HOH HOH . F 4 HOH A 221 821 103 HOH HOH . F 4 HOH A 222 822 202 HOH HOH . F 4 HOH A 223 823 147 HOH HOH . F 4 HOH A 224 824 242 HOH HOH . F 4 HOH A 225 825 102 HOH HOH . F 4 HOH A 226 826 141 HOH HOH . F 4 HOH A 227 827 199 HOH HOH . F 4 HOH A 228 828 101 HOH HOH . F 4 HOH A 229 829 196 HOH HOH . F 4 HOH A 230 830 207 HOH HOH . F 4 HOH A 231 831 204 HOH HOH . F 4 HOH A 232 832 136 HOH HOH . F 4 HOH A 233 833 205 HOH HOH . F 4 HOH A 234 834 118 HOH HOH . F 4 HOH A 235 835 173 HOH HOH . F 4 HOH A 236 836 91 HOH HOH . F 4 HOH A 237 837 107 HOH HOH . F 4 HOH A 238 838 106 HOH HOH . F 4 HOH A 239 839 214 HOH HOH . F 4 HOH A 240 840 241 HOH HOH . F 4 HOH A 241 841 140 HOH HOH . F 4 HOH A 242 842 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N IEK . . . C 2 4.191 -24.176 -13.107 1 32.88 ? N IEK 502 A 1 HETATM 2 C C IEK . . . C 2 2.968 -23.372 -15.102 1 36.26 ? C IEK 502 A 1 HETATM 3 O O IEK . . . C 2 2.011 -23.998 -14.587 1 39.06 ? O IEK 502 A 1 HETATM 4 C C6 IEK . . . C 2 3.556 -24.327 -9.597 1 28.72 ? C6 IEK 502 A 1 HETATM 5 C C4 IEK . . . C 2 3.458 -27.583 -7.91 1 27.64 ? C4 IEK 502 A 1 HETATM 6 C C7 IEK . . . C 2 4.057 -24.702 -10.85 1 29.34 ? C7 IEK 502 A 1 HETATM 7 C C2 IEK . . . C 2 4.265 -29.22 -9.496 1 26.92 ? C2 IEK 502 A 1 HETATM 8 N N1 IEK . . . C 2 4.442 -28.25 -10.417 1 26.97 ? N1 IEK 502 A 1 HETATM 9 C CD1 IEK . . . C 2 7.427 -24.193 -13.486 1 29.92 ? CD1 IEK 502 A 1 HETATM 10 C CE1 IEK . . . C 2 8.581 -23.883 -12.751 1 28.97 ? CE1 IEK 502 A 1 HETATM 11 C CZ IEK . . . C 2 9.127 -22.597 -12.845 1 29.15 ? CZ IEK 502 A 1 HETATM 12 C CE2 IEK . . . C 2 8.529 -21.621 -13.653 1 28.68 ? CE2 IEK 502 A 1 HETATM 13 C CD2 IEK . . . C 2 7.376 -21.937 -14.385 1 30.06 ? CD2 IEK 502 A 1 HETATM 14 C CG IEK . . . C 2 6.818 -23.224 -14.301 1 30.56 ? CG IEK 502 A 1 HETATM 15 C CB IEK . . . C 2 5.549 -23.578 -15.104 1 32.07 ? CB IEK 502 A 1 HETATM 16 C CA IEK . . . C 2 4.28 -23.271 -14.277 1 34 ? CA IEK 502 A 1 HETATM 17 O OXT IEK . . . C 2 2.916 -22.778 -16.2 1 36.89 ? OXT IEK 502 A 1 HETATM 18 C CAL IEK . . . C 2 4.222 -23.723 -11.84 1 30.92 ? CAL IEK 502 A 1 HETATM 19 O OAQ IEK . . . C 2 4.267 -22.525 -11.551 1 32.68 ? OAQ IEK 502 A 1 HETATM 20 N N8 IEK . . . C 2 4.327 -26.007 -11.088 1 27.77 ? N8 IEK 502 A 1 HETATM 21 C C8A IEK . . . C 2 4.148 -26.957 -10.145 1 27.11 ? C8A IEK 502 A 1 HETATM 22 N N2 IEK . . . C 2 4.553 -30.483 -9.781 1 27.02 ? N2 IEK 502 A 1 HETATM 23 N N3 IEK . . . C 2 3.77 -28.91 -8.22 1 26.96 ? N3 IEK 502 A 1 HETATM 24 O O4 IEK . . . C 2 3.021 -27.32 -6.791 1 28.01 ? O4 IEK 502 A 1 HETATM 25 C C4A IEK . . . C 2 3.654 -26.596 -8.879 1 27.32 ? C4A IEK 502 A 1 HETATM 26 N N5 IEK . . . C 2 3.366 -25.311 -8.613 1 28.06 ? N5 IEK 502 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #