data_7XZW # _model_server_result.job_id J_dfcj4fsf5Tpe7Fo4bsVg _model_server_result.datetime_utc '2024-11-12 20:41:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7xzw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7XZW # _exptl.entry_id 7XZW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 354.32 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-3-phenyl-propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7XZW _cell.length_a 67.164 _cell.length_b 67.164 _cell.length_c 141.191 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7XZW _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H14 N6 O4' _chem_comp.formula_weight 354.32 _chem_comp.id IEW _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-[(2-azanyl-4-oxidanylidene-3H-pteridin-7-yl)carbonylamino]-3-phenyl-propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (2-amino-4-oxo-3,4-dihydropteridine-7-carbonyl)-D-phenylalanine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CAL IEW sing 152 n n C6 N5 IEW doub 153 n y C6 C7 IEW sing 154 n y N5 C4A IEW sing 155 n y O4 C4 IEW doub 156 n n CAL C7 IEW sing 157 n n CAL OAQ IEW doub 158 n n C7 N8 IEW doub 159 n y C4A C4 IEW sing 160 n n C4A C8A IEW doub 161 n y C4 N3 IEW sing 162 n n N8 C8A IEW sing 163 n y C8A N1 IEW sing 164 n n N3 C2 IEW sing 165 n n N1 C2 IEW doub 166 n n C2 N2 IEW sing 167 n n C6 H1 IEW sing 168 n n N H2 IEW sing 169 n n N2 H4 IEW sing 170 n n N2 H5 IEW sing 171 n n N3 H6 IEW sing 172 n n N CA IEW sing 173 n n CA CB IEW sing 174 n n CA C IEW sing 175 n n C OXT IEW sing 176 n n C O IEW doub 177 n n CB CG IEW sing 178 n n CG CD1 IEW sing 179 n y CD1 CE1 IEW doub 180 n y CE1 CZ IEW sing 181 n y CZ CE2 IEW doub 182 n y CE2 CD2 IEW sing 183 n y CD2 CG IEW doub 184 n y CA H3 IEW sing 185 n n CB H7 IEW sing 186 n n CB H8 IEW sing 187 n n OXT H9 IEW sing 188 n n CD1 H10 IEW sing 189 n n CE1 H11 IEW sing 190 n n CZ H12 IEW sing 191 n n CE2 H13 IEW sing 192 n n CD2 H14 IEW sing 193 n n # _atom_sites.entry_id 7XZW _atom_sites.fract_transf_matrix[1][1] 0.014889 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007083 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IEW A 1 501 501 IEW 7DF . C 3 SO4 A 1 502 601 SO4 SO4 . D 3 SO4 A 1 503 602 SO4 SO4 . E 4 HOH A 1 601 185 HOH HOH . E 4 HOH A 2 602 25 HOH HOH . E 4 HOH A 3 603 103 HOH HOH . E 4 HOH A 4 604 3 HOH HOH . E 4 HOH A 5 605 113 HOH HOH . E 4 HOH A 6 606 208 HOH HOH . E 4 HOH A 7 607 122 HOH HOH . E 4 HOH A 8 608 32 HOH HOH . E 4 HOH A 9 609 266 HOH HOH . E 4 HOH A 10 610 33 HOH HOH . E 4 HOH A 11 611 29 HOH HOH . E 4 HOH A 12 612 67 HOH HOH . E 4 HOH A 13 613 267 HOH HOH . E 4 HOH A 14 614 30 HOH HOH . E 4 HOH A 15 615 162 HOH HOH . E 4 HOH A 16 616 9 HOH HOH . E 4 HOH A 17 617 134 HOH HOH . E 4 HOH A 18 618 245 HOH HOH . E 4 HOH A 19 619 52 HOH HOH . E 4 HOH A 20 620 236 HOH HOH . E 4 HOH A 21 621 88 HOH HOH . E 4 HOH A 22 622 249 HOH HOH . E 4 HOH A 23 623 15 HOH HOH . E 4 HOH A 24 624 43 HOH HOH . E 4 HOH A 25 625 138 HOH HOH . E 4 HOH A 26 626 26 HOH HOH . E 4 HOH A 27 627 207 HOH HOH . E 4 HOH A 28 628 10 HOH HOH . E 4 HOH A 29 629 64 HOH HOH . E 4 HOH A 30 630 270 HOH HOH . E 4 HOH A 31 631 39 HOH HOH . E 4 HOH A 32 632 18 HOH HOH . E 4 HOH A 33 633 171 HOH HOH . E 4 HOH A 34 634 38 HOH HOH . E 4 HOH A 35 635 243 HOH HOH . E 4 HOH A 36 636 44 HOH HOH . E 4 HOH A 37 637 17 HOH HOH . E 4 HOH A 38 638 86 HOH HOH . E 4 HOH A 39 639 13 HOH HOH . E 4 HOH A 40 640 70 HOH HOH . E 4 HOH A 41 641 221 HOH HOH . E 4 HOH A 42 642 4 HOH HOH . E 4 HOH A 43 643 54 HOH HOH . E 4 HOH A 44 644 269 HOH HOH . E 4 HOH A 45 645 76 HOH HOH . E 4 HOH A 46 646 14 HOH HOH . E 4 HOH A 47 647 1 HOH HOH . E 4 HOH A 48 648 89 HOH HOH . E 4 HOH A 49 649 35 HOH HOH . E 4 HOH A 50 650 230 HOH HOH . E 4 HOH A 51 651 7 HOH HOH . E 4 HOH A 52 652 42 HOH HOH . E 4 HOH A 53 653 8 HOH HOH . E 4 HOH A 54 654 190 HOH HOH . E 4 HOH A 55 655 28 HOH HOH . E 4 HOH A 56 656 57 HOH HOH . E 4 HOH A 57 657 194 HOH HOH . E 4 HOH A 58 658 2 HOH HOH . E 4 HOH A 59 659 250 HOH HOH . E 4 HOH A 60 660 110 HOH HOH . E 4 HOH A 61 661 175 HOH HOH . E 4 HOH A 62 662 147 HOH HOH . E 4 HOH A 63 663 46 HOH HOH . E 4 HOH A 64 664 216 HOH HOH . E 4 HOH A 65 665 73 HOH HOH . E 4 HOH A 66 666 101 HOH HOH . E 4 HOH A 67 667 34 HOH HOH . E 4 HOH A 68 668 62 HOH HOH . E 4 HOH A 69 669 19 HOH HOH . E 4 HOH A 70 670 41 HOH HOH . E 4 HOH A 71 671 109 HOH HOH . E 4 HOH A 72 672 198 HOH HOH . E 4 HOH A 73 673 74 HOH HOH . E 4 HOH A 74 674 154 HOH HOH . E 4 HOH A 75 675 136 HOH HOH . E 4 HOH A 76 676 102 HOH HOH . E 4 HOH A 77 677 40 HOH HOH . E 4 HOH A 78 678 177 HOH HOH . E 4 HOH A 79 679 50 HOH HOH . E 4 HOH A 80 680 168 HOH HOH . E 4 HOH A 81 681 126 HOH HOH . E 4 HOH A 82 682 63 HOH HOH . E 4 HOH A 83 683 263 HOH HOH . E 4 HOH A 84 684 143 HOH HOH . E 4 HOH A 85 685 248 HOH HOH . E 4 HOH A 86 686 215 HOH HOH . E 4 HOH A 87 687 56 HOH HOH . E 4 HOH A 88 688 31 HOH HOH . E 4 HOH A 89 689 97 HOH HOH . E 4 HOH A 90 690 49 HOH HOH . E 4 HOH A 91 691 83 HOH HOH . E 4 HOH A 92 692 104 HOH HOH . E 4 HOH A 93 693 132 HOH HOH . E 4 HOH A 94 694 253 HOH HOH . E 4 HOH A 95 695 20 HOH HOH . E 4 HOH A 96 696 265 HOH HOH . E 4 HOH A 97 697 61 HOH HOH . E 4 HOH A 98 698 119 HOH HOH . E 4 HOH A 99 699 37 HOH HOH . E 4 HOH A 100 700 139 HOH HOH . E 4 HOH A 101 701 116 HOH HOH . E 4 HOH A 102 702 213 HOH HOH . E 4 HOH A 103 703 58 HOH HOH . E 4 HOH A 104 704 145 HOH HOH . E 4 HOH A 105 705 92 HOH HOH . E 4 HOH A 106 706 212 HOH HOH . E 4 HOH A 107 707 169 HOH HOH . E 4 HOH A 108 708 81 HOH HOH . E 4 HOH A 109 709 93 HOH HOH . E 4 HOH A 110 710 22 HOH HOH . E 4 HOH A 111 711 105 HOH HOH . E 4 HOH A 112 712 189 HOH HOH . E 4 HOH A 113 713 91 HOH HOH . E 4 HOH A 114 714 167 HOH HOH . E 4 HOH A 115 715 197 HOH HOH . E 4 HOH A 116 716 159 HOH HOH . E 4 HOH A 117 717 80 HOH HOH . E 4 HOH A 118 718 184 HOH HOH . E 4 HOH A 119 719 170 HOH HOH . E 4 HOH A 120 720 257 HOH HOH . E 4 HOH A 121 721 6 HOH HOH . E 4 HOH A 122 722 271 HOH HOH . E 4 HOH A 123 723 12 HOH HOH . E 4 HOH A 124 724 179 HOH HOH . E 4 HOH A 125 725 157 HOH HOH . E 4 HOH A 126 726 53 HOH HOH . E 4 HOH A 127 727 114 HOH HOH . E 4 HOH A 128 728 121 HOH HOH . E 4 HOH A 129 729 66 HOH HOH . E 4 HOH A 130 730 55 HOH HOH . E 4 HOH A 131 731 71 HOH HOH . E 4 HOH A 132 732 48 HOH HOH . E 4 HOH A 133 733 133 HOH HOH . E 4 HOH A 134 734 140 HOH HOH . E 4 HOH A 135 735 227 HOH HOH . E 4 HOH A 136 736 176 HOH HOH . E 4 HOH A 137 737 100 HOH HOH . E 4 HOH A 138 738 90 HOH HOH . E 4 HOH A 139 739 94 HOH HOH . E 4 HOH A 140 740 166 HOH HOH . E 4 HOH A 141 741 142 HOH HOH . E 4 HOH A 142 742 217 HOH HOH . E 4 HOH A 143 743 60 HOH HOH . E 4 HOH A 144 744 251 HOH HOH . E 4 HOH A 145 745 23 HOH HOH . E 4 HOH A 146 746 233 HOH HOH . E 4 HOH A 147 747 11 HOH HOH . E 4 HOH A 148 748 65 HOH HOH . E 4 HOH A 149 749 244 HOH HOH . E 4 HOH A 150 750 131 HOH HOH . E 4 HOH A 151 751 203 HOH HOH . E 4 HOH A 152 752 195 HOH HOH . E 4 HOH A 153 753 156 HOH HOH . E 4 HOH A 154 754 172 HOH HOH . E 4 HOH A 155 755 148 HOH HOH . E 4 HOH A 156 756 224 HOH HOH . E 4 HOH A 157 757 118 HOH HOH . E 4 HOH A 158 758 135 HOH HOH . E 4 HOH A 159 759 98 HOH HOH . E 4 HOH A 160 760 202 HOH HOH . E 4 HOH A 161 761 21 HOH HOH . E 4 HOH A 162 762 82 HOH HOH . E 4 HOH A 163 763 72 HOH HOH . E 4 HOH A 164 764 24 HOH HOH . E 4 HOH A 165 765 78 HOH HOH . E 4 HOH A 166 766 260 HOH HOH . E 4 HOH A 167 767 160 HOH HOH . E 4 HOH A 168 768 150 HOH HOH . E 4 HOH A 169 769 219 HOH HOH . E 4 HOH A 170 770 247 HOH HOH . E 4 HOH A 171 771 211 HOH HOH . E 4 HOH A 172 772 196 HOH HOH . E 4 HOH A 173 773 77 HOH HOH . E 4 HOH A 174 774 115 HOH HOH . E 4 HOH A 175 775 84 HOH HOH . E 4 HOH A 176 776 229 HOH HOH . E 4 HOH A 177 777 51 HOH HOH . E 4 HOH A 178 778 99 HOH HOH . E 4 HOH A 179 779 85 HOH HOH . E 4 HOH A 180 780 181 HOH HOH . E 4 HOH A 181 781 178 HOH HOH . E 4 HOH A 182 782 27 HOH HOH . E 4 HOH A 183 783 234 HOH HOH . E 4 HOH A 184 784 187 HOH HOH . E 4 HOH A 185 785 192 HOH HOH . E 4 HOH A 186 786 96 HOH HOH . E 4 HOH A 187 787 149 HOH HOH . E 4 HOH A 188 788 209 HOH HOH . E 4 HOH A 189 789 69 HOH HOH . E 4 HOH A 190 790 268 HOH HOH . E 4 HOH A 191 791 220 HOH HOH . E 4 HOH A 192 792 201 HOH HOH . E 4 HOH A 193 793 252 HOH HOH . E 4 HOH A 194 794 128 HOH HOH . E 4 HOH A 195 795 68 HOH HOH . E 4 HOH A 196 796 117 HOH HOH . E 4 HOH A 197 797 144 HOH HOH . E 4 HOH A 198 798 188 HOH HOH . E 4 HOH A 199 799 173 HOH HOH . E 4 HOH A 200 800 272 HOH HOH . E 4 HOH A 201 801 210 HOH HOH . E 4 HOH A 202 802 258 HOH HOH . E 4 HOH A 203 803 141 HOH HOH . E 4 HOH A 204 804 206 HOH HOH . E 4 HOH A 205 805 193 HOH HOH . E 4 HOH A 206 806 199 HOH HOH . E 4 HOH A 207 807 255 HOH HOH . E 4 HOH A 208 808 5 HOH HOH . E 4 HOH A 209 809 256 HOH HOH . E 4 HOH A 210 810 129 HOH HOH . E 4 HOH A 211 811 223 HOH HOH . E 4 HOH A 212 812 87 HOH HOH . E 4 HOH A 213 813 47 HOH HOH . E 4 HOH A 214 814 238 HOH HOH . E 4 HOH A 215 815 218 HOH HOH . E 4 HOH A 216 816 259 HOH HOH . E 4 HOH A 217 817 45 HOH HOH . E 4 HOH A 218 818 180 HOH HOH . E 4 HOH A 219 819 155 HOH HOH . E 4 HOH A 220 820 241 HOH HOH . E 4 HOH A 221 821 214 HOH HOH . E 4 HOH A 222 822 16 HOH HOH . E 4 HOH A 223 823 235 HOH HOH . E 4 HOH A 224 824 182 HOH HOH . E 4 HOH A 225 825 174 HOH HOH . E 4 HOH A 226 826 137 HOH HOH . E 4 HOH A 227 827 222 HOH HOH . E 4 HOH A 228 828 183 HOH HOH . E 4 HOH A 229 829 200 HOH HOH . E 4 HOH A 230 830 79 HOH HOH . E 4 HOH A 231 831 226 HOH HOH . E 4 HOH A 232 832 108 HOH HOH . E 4 HOH A 233 833 237 HOH HOH . E 4 HOH A 234 834 163 HOH HOH . E 4 HOH A 235 835 123 HOH HOH . E 4 HOH A 236 836 205 HOH HOH . E 4 HOH A 237 837 164 HOH HOH . E 4 HOH A 238 838 152 HOH HOH . E 4 HOH A 239 839 232 HOH HOH . E 4 HOH A 240 840 158 HOH HOH . E 4 HOH A 241 841 120 HOH HOH . E 4 HOH A 242 842 127 HOH HOH . E 4 HOH A 243 843 165 HOH HOH . E 4 HOH A 244 844 254 HOH HOH . E 4 HOH A 245 845 264 HOH HOH . E 4 HOH A 246 846 130 HOH HOH . E 4 HOH A 247 847 161 HOH HOH . E 4 HOH A 248 848 191 HOH HOH . E 4 HOH A 249 849 228 HOH HOH . E 4 HOH A 250 850 106 HOH HOH . E 4 HOH A 251 851 246 HOH HOH . E 4 HOH A 252 852 231 HOH HOH . E 4 HOH A 253 853 151 HOH HOH . E 4 HOH A 254 854 75 HOH HOH . E 4 HOH A 255 855 261 HOH HOH . E 4 HOH A 256 856 36 HOH HOH . E 4 HOH A 257 857 242 HOH HOH . E 4 HOH A 258 858 240 HOH HOH . E 4 HOH A 259 859 59 HOH HOH . E 4 HOH A 260 860 112 HOH HOH . E 4 HOH A 261 861 186 HOH HOH . E 4 HOH A 262 862 204 HOH HOH . E 4 HOH A 263 863 95 HOH HOH . E 4 HOH A 264 864 146 HOH HOH . E 4 HOH A 265 865 225 HOH HOH . E 4 HOH A 266 866 124 HOH HOH . E 4 HOH A 267 867 239 HOH HOH . E 4 HOH A 268 868 111 HOH HOH . E 4 HOH A 269 869 153 HOH HOH . E 4 HOH A 270 870 125 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 IEW . . . B 2 9.696 -24.828 -6.519 1 19.74 ? C2 IEW 501 A 1 HETATM 2 C C4 IEW . . . B 2 10.949 -24.728 -8.578 1 19.87 ? C4 IEW 501 A 1 HETATM 3 C C6 IEW . . . B 2 10.304 -21.393 -10.001 1 21.25 ? C6 IEW 501 A 1 HETATM 4 C C7 IEW . . . B 2 9.438 -20.856 -9.04 1 21.22 ? C7 IEW 501 A 1 HETATM 5 O O4 IEW . . . B 2 11.716 -25.268 -9.375 1 19.59 ? O4 IEW 501 A 1 HETATM 6 N N IEW . . . B 2 9.15 -18.922 -10.328 1 22.41 ? N IEW 501 A 1 HETATM 7 C CAL IEW . . . B 2 8.896 -19.568 -9.175 1 21.88 ? CAL IEW 501 A 1 HETATM 8 O OAQ IEW . . . B 2 8.164 -19.094 -8.305 1 21.61 ? OAQ IEW 501 A 1 HETATM 9 N N8 IEW . . . B 2 9.119 -21.618 -7.97 1 21.11 ? N8 IEW 501 A 1 HETATM 10 C C8A IEW . . . B 2 9.613 -22.863 -7.811 1 20.58 ? C8A IEW 501 A 1 HETATM 11 N N1 IEW . . . B 2 9.257 -23.571 -6.73 1 20.01 ? N1 IEW 501 A 1 HETATM 12 N N2 IEW . . . B 2 9.321 -25.492 -5.435 1 19.56 ? N2 IEW 501 A 1 HETATM 13 N N3 IEW . . . B 2 10.564 -25.434 -7.437 1 19.33 ? N3 IEW 501 A 1 HETATM 14 C C4A IEW . . . B 2 10.471 -23.424 -8.767 1 20.2 ? C4A IEW 501 A 1 HETATM 15 N N5 IEW . . . B 2 10.816 -22.691 -9.841 1 20.53 ? N5 IEW 501 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #