data_7Y12 # _model_server_result.job_id qxqhdjCA8uNwH3ij-P20Cw _model_server_result.datetime_utc '2025-07-30 17:10:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7y12 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1004}' # _entry.id 7Y12 # _exptl.entry_id 7Y12 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Y12 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Y12 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 289 R CYS 164 1_555 D SG CYS 300 R CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 E SG CYS 196 S CYS 147 1_555 E SG CYS 266 S CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 270 n n C1 O2 PLM doub 271 n n C1 C2 PLM sing 272 n n O1 H PLM sing 273 n n C2 C3 PLM sing 274 n n C2 H21 PLM sing 275 n n C2 H22 PLM sing 276 n n C3 C4 PLM sing 277 n n C3 H31 PLM sing 278 n n C3 H32 PLM sing 279 n n C4 C5 PLM sing 280 n n C4 H41 PLM sing 281 n n C4 H42 PLM sing 282 n n C5 C6 PLM sing 283 n n C5 H51 PLM sing 284 n n C5 H52 PLM sing 285 n n C6 C7 PLM sing 286 n n C6 H61 PLM sing 287 n n C6 H62 PLM sing 288 n n C7 C8 PLM sing 289 n n C7 H71 PLM sing 290 n n C7 H72 PLM sing 291 n n C8 C9 PLM sing 292 n n C8 H81 PLM sing 293 n n C8 H82 PLM sing 294 n n C9 CA PLM sing 295 n n C9 H91 PLM sing 296 n n C9 H92 PLM sing 297 n n CA CB PLM sing 298 n n CA HA1 PLM sing 299 n n CA HA2 PLM sing 300 n n CB CC PLM sing 301 n n CB HB1 PLM sing 302 n n CB HB2 PLM sing 303 n n CC CD PLM sing 304 n n CC HC1 PLM sing 305 n n CC HC2 PLM sing 306 n n CD CE PLM sing 307 n n CD HD1 PLM sing 308 n n CD HD2 PLM sing 309 n n CE CF PLM sing 310 n n CE HE1 PLM sing 311 n n CE HE2 PLM sing 312 n n CF CG PLM sing 313 n n CF HF1 PLM sing 314 n n CF HF2 PLM sing 315 n n CG HG1 PLM sing 316 n n CG HG2 PLM sing 317 n n CG HG3 PLM sing 318 n n # _atom_sites.entry_id 7Y12 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 BAL R 1 1001 1001 BAL BAL . G 7 PLM R 1 1002 1003 PLM PLM . H 7 PLM R 1 1003 1004 PLM PLM . I 7 PLM R 1 1004 1005 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . I 7 115.065 100.345 115.117 1 44.99 ? C1 PLM 1004 R 1 HETATM 2 O O1 PLM . . . I 7 116.242 100.165 114.747 1 45.73 ? O1 PLM 1004 R 1 HETATM 3 O O2 PLM . . . I 7 114.164 100.392 114.254 1 45.15 ? O2 PLM 1004 R 1 HETATM 4 C C2 PLM . . . I 7 114.739 100.494 116.582 1 36.24 ? C2 PLM 1004 R 1 HETATM 5 C C3 PLM . . . I 7 115.527 99.477 117.396 1 36.88 ? C3 PLM 1004 R 1 HETATM 6 C C4 PLM . . . I 7 115.496 99.83 118.878 1 39.33 ? C4 PLM 1004 R 1 HETATM 7 C C5 PLM . . . I 7 116.413 101.005 119.181 1 36.24 ? C5 PLM 1004 R 1 HETATM 8 C C6 PLM . . . I 7 115.77 101.979 120.16 1 34.07 ? C6 PLM 1004 R 1 HETATM 9 C C7 PLM . . . I 7 115.544 101.341 121.525 1 38.23 ? C7 PLM 1004 R 1 HETATM 10 C C8 PLM . . . I 7 116.768 101.508 122.416 1 43.91 ? C8 PLM 1004 R 1 HETATM 11 C C9 PLM . . . I 7 117.05 102.978 122.705 1 41.57 ? C9 PLM 1004 R 1 HETATM 12 C CA PLM . . . I 7 116.113 103.528 123.773 1 39.63 ? CA PLM 1004 R 1 HETATM 13 C CB PLM . . . I 7 116.13 102.635 125.007 1 40.11 ? CB PLM 1004 R 1 HETATM 14 C CC PLM . . . I 7 115.381 103.278 126.167 1 46 ? CC PLM 1004 R 1 HETATM 15 C CD PLM . . . I 7 115.44 102.394 127.406 1 47.66 ? CD PLM 1004 R 1 HETATM 16 C CE PLM . . . I 7 114.411 102.833 128.441 1 45.33 ? CE PLM 1004 R 1 HETATM 17 C CF PLM . . . I 7 114.997 102.815 129.848 1 43.55 ? CF PLM 1004 R 1 HETATM 18 C CG PLM . . . I 7 115.842 101.566 130.077 1 39.68 ? CG PLM 1004 R 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #