data_7Y15 # _model_server_result.job_id S3RjLvdKmg4aAo_54HAeWQ _model_server_result.datetime_utc '2024-11-21 22:54:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7y15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 7Y15 # _exptl.entry_id 7Y15 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Y15 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Y15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 289 R CYS 164 1_555 D SG CYS 300 R CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 E SG CYS 196 S CYS 147 1_555 E SG CYS 266 S CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 258 n n C1 O2 PLM doub 259 n n C1 C2 PLM sing 260 n n O1 H PLM sing 261 n n C2 C3 PLM sing 262 n n C2 H21 PLM sing 263 n n C2 H22 PLM sing 264 n n C3 C4 PLM sing 265 n n C3 H31 PLM sing 266 n n C3 H32 PLM sing 267 n n C4 C5 PLM sing 268 n n C4 H41 PLM sing 269 n n C4 H42 PLM sing 270 n n C5 C6 PLM sing 271 n n C5 H51 PLM sing 272 n n C5 H52 PLM sing 273 n n C6 C7 PLM sing 274 n n C6 H61 PLM sing 275 n n C6 H62 PLM sing 276 n n C7 C8 PLM sing 277 n n C7 H71 PLM sing 278 n n C7 H72 PLM sing 279 n n C8 C9 PLM sing 280 n n C8 H81 PLM sing 281 n n C8 H82 PLM sing 282 n n C9 CA PLM sing 283 n n C9 H91 PLM sing 284 n n C9 H92 PLM sing 285 n n CA CB PLM sing 286 n n CA HA1 PLM sing 287 n n CA HA2 PLM sing 288 n n CB CC PLM sing 289 n n CB HB1 PLM sing 290 n n CB HB2 PLM sing 291 n n CC CD PLM sing 292 n n CC HC1 PLM sing 293 n n CC HC2 PLM sing 294 n n CD CE PLM sing 295 n n CD HD1 PLM sing 296 n n CD HD2 PLM sing 297 n n CE CF PLM sing 298 n n CE HE1 PLM sing 299 n n CE HE2 PLM sing 300 n n CF CG PLM sing 301 n n CF HF1 PLM sing 302 n n CF HF2 PLM sing 303 n n CG HG1 PLM sing 304 n n CG HG2 PLM sing 305 n n CG HG3 PLM sing 306 n n # _atom_sites.entry_id 7Y15 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 PLM R 1 401 302 PLM PLM . G 6 PLM R 1 402 303 PLM PLM . H 6 PLM R 1 403 304 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . G 6 103.759 105.117 110.629 1 37.19 ? C1 PLM 402 R 1 HETATM 2 O O1 PLM . . . G 6 104.081 103.91 110.64 1 37.42 ? O1 PLM 402 R 1 HETATM 3 O O2 PLM . . . G 6 104.054 105.813 109.633 1 37.09 ? O2 PLM 402 R 1 HETATM 4 C C2 PLM . . . G 6 103.027 105.723 111.802 1 31.67 ? C2 PLM 402 R 1 HETATM 5 C C3 PLM . . . G 6 102.721 107.19 111.526 1 30.04 ? C3 PLM 402 R 1 HETATM 6 C C4 PLM . . . G 6 103.879 108.077 111.965 1 31.67 ? C4 PLM 402 R 1 HETATM 7 C C5 PLM . . . G 6 103.97 108.139 113.484 1 29.54 ? C5 PLM 402 R 1 HETATM 8 C C6 PLM . . . G 6 103.924 109.575 113.991 1 27.25 ? C6 PLM 402 R 1 HETATM 9 C C7 PLM . . . G 6 103.641 109.603 115.488 1 31.65 ? C7 PLM 402 R 1 HETATM 10 C C8 PLM . . . G 6 104.54 108.624 116.234 1 30.49 ? C8 PLM 402 R 1 HETATM 11 C C9 PLM . . . G 6 104.002 108.333 117.629 1 28.68 ? C9 PLM 402 R 1 HETATM 12 C CA PLM . . . G 6 103.782 109.616 118.42 1 27.63 ? CA PLM 402 R 1 HETATM 13 C CB PLM . . . G 6 103.138 109.308 119.765 1 29.2 ? CB PLM 402 R 1 HETATM 14 C CC PLM . . . G 6 102.855 110.58 120.555 1 27.99 ? CC PLM 402 R 1 HETATM 15 C CD PLM . . . G 6 102.729 110.27 122.042 1 30.13 ? CD PLM 402 R 1 HETATM 16 C CE PLM . . . G 6 101.965 111.366 122.774 1 30.58 ? CE PLM 402 R 1 HETATM 17 C CF PLM . . . G 6 102.776 111.907 123.945 1 30.8 ? CF PLM 402 R 1 HETATM 18 C CG PLM . . . G 6 101.898 112.109 125.174 1 27.61 ? CG PLM 402 R 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 18 #