data_7Y4J # _model_server_result.job_id HiqZrSVIh8CotAEvEYxgTA _model_server_result.datetime_utc '2024-10-20 05:39:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7y4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7Y4J # _exptl.entry_id 7Y4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Y4J _cell.length_a 88.587 _cell.length_b 43.439 _cell.length_c 53.326 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Y4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 199 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 199 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 199 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 199 _struct_conn.ptnr2_symmetry 2_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.016 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 237 n n C3' C4' NHE sing 238 n n C3' "H3'1" NHE sing 239 n n C3' "H3'2" NHE sing 240 n n C2' C1' NHE sing 241 n n C2' "H2'1" NHE sing 242 n n C2' "H2'2" NHE sing 243 n n C1' C6' NHE sing 244 n n C1' N NHE sing 245 n n C1' "HC'1" NHE sing 246 n n C6' C5' NHE sing 247 n n C6' "H6'1" NHE sing 248 n n C6' "H6'2" NHE sing 249 n n N C1 NHE sing 250 n n N HN NHE sing 251 n n C1 C2 NHE sing 252 n n C1 HC11 NHE sing 253 n n C1 HC12 NHE sing 254 n n C2 S NHE sing 255 n n C2 HC21 NHE sing 256 n n C2 HC22 NHE sing 257 n n S O1 NHE doub 258 n n S O2 NHE doub 259 n n S O3 NHE sing 260 n n O3 HO3 NHE sing 261 n n C5' C4' NHE sing 262 n n C5' "H5'1" NHE sing 263 n n C5' "H5'2" NHE sing 264 n n C4' "H4'1" NHE sing 265 n n C4' "H4'2" NHE sing 266 n n # _atom_sites.entry_id 7Y4J _atom_sites.fract_transf_matrix[1][1] 0.011288 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023021 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018753 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NHE A 1 301 301 NHE NHE . C 3 HOH A 1 401 20 HOH HOH . C 3 HOH A 2 402 9 HOH HOH . C 3 HOH A 3 403 6 HOH HOH . C 3 HOH A 4 404 2 HOH HOH . C 3 HOH A 5 405 1 HOH HOH . C 3 HOH A 6 406 3 HOH HOH . C 3 HOH A 7 407 5 HOH HOH . C 3 HOH A 8 408 16 HOH HOH . C 3 HOH A 9 409 19 HOH HOH . C 3 HOH A 10 410 7 HOH HOH . C 3 HOH A 11 411 4 HOH HOH . C 3 HOH A 12 412 15 HOH HOH . C 3 HOH A 13 413 11 HOH HOH . C 3 HOH A 14 414 17 HOH HOH . C 3 HOH A 15 415 10 HOH HOH . C 3 HOH A 16 416 14 HOH HOH . C 3 HOH A 17 417 21 HOH HOH . C 3 HOH A 18 418 13 HOH HOH . C 3 HOH A 19 419 18 HOH HOH . C 3 HOH A 20 420 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . B 2 9.437 4.79 10.012 0.88 52.55 ? C3' NHE 301 A 1 HETATM 2 C C2' NHE . . . B 2 8.034 5.382 9.909 0.95 42.53 ? C2' NHE 301 A 1 HETATM 3 C C1' NHE . . . B 2 8.017 6.858 10.313 0.98 46.63 ? C1' NHE 301 A 1 HETATM 4 C C6' NHE . . . B 2 9.399 7.515 10.241 1 51.56 ? C6' NHE 301 A 1 HETATM 5 N N NHE . . . B 2 7.101 7.596 9.441 0.78 55.16 ? N NHE 301 A 1 HETATM 6 C C1 NHE . . . B 2 6.564 8.719 10.189 0.9 54.68 ? C1 NHE 301 A 1 HETATM 7 C C2 NHE . . . B 2 5.824 9.666 9.249 0.96 56.1 ? C2 NHE 301 A 1 HETATM 8 S S NHE . . . B 2 5.37 11.162 10.17 1 125.79 ? S NHE 301 A 1 HETATM 9 O O1 NHE . . . B 2 6.607 11.944 10.542 0.99 70.3 ? O1 NHE 301 A 1 HETATM 10 O O2 NHE . . . B 2 4.396 12.008 9.387 1 55.33 ? O2 NHE 301 A 1 HETATM 11 O O3 NHE . . . B 2 4.554 10.821 11.393 0.84 78.34 ? O3 NHE 301 A 1 HETATM 12 C C5' NHE . . . B 2 10.258 7.008 9.082 0.83 42.42 ? C5' NHE 301 A 1 HETATM 13 C C4' NHE . . . B 2 10.387 5.482 9.035 0.83 43.76 ? C4' NHE 301 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 527 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 13 #