data_7Y5C # _model_server_result.job_id hkHio_W9dHuy9y9pXr6THA _model_server_result.datetime_utc '2024-10-11 04:29:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7y5c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":600}' # _entry.id 7Y5C # _exptl.entry_id 7Y5C _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Y5C _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Y5C _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 U N N ? 9 W N N ? 9 Y N N ? 9 AA N N ? 9 DA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 U MG MG . A MG 600 1_555 V O1A ATP . A ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc2 U MG MG . A MG 600 1_555 V O2A ATP . A ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc3 U MG MG . A MG 600 1_555 V O3A ATP . A ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc4 U MG MG . A MG 600 1_555 V O1B ATP . A ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc5 U MG MG . A MG 600 1_555 V O1G ATP . A ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc6 U MG MG . A MG 600 1_555 V O3G ATP . A ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? metalc ? metalc7 U MG MG . A MG 600 1_555 V O3B ATP . A ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc8 W MG MG . B MG 600 1_555 X O1B ATP . B ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc9 W MG MG . B MG 600 1_555 X O3B ATP . B ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc10 W MG MG . B MG 600 1_555 X O2A ATP . B ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc11 W MG MG . B MG 600 1_555 X O3G ATP . B ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc12 W MG MG . B MG 600 1_555 X O1A ATP . B ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc13 W MG MG . B MG 600 1_555 X O3A ATP . B ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc14 W MG MG . B MG 600 1_555 X O1G ATP . B ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc15 C OG1 THR 179 C THR 179 1_555 Y MG MG . C MG 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc16 Y MG MG . C MG 600 1_555 Z O1A ATP . C ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc17 Y MG MG . C MG 600 1_555 Z O3A ATP . C ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc18 Y MG MG . C MG 600 1_555 Z O1B ATP . C ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc19 Y MG MG . C MG 600 1_555 Z O3B ATP . C ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc20 Y MG MG . C MG 600 1_555 Z O3G ATP . C ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc21 Y MG MG . C MG 600 1_555 Z O1G ATP . C ATP 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.919 ? metalc ? metalc22 D OG1 THR 173 D THR 167 1_555 AA MG MG . D MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc23 AA MG MG . D MG 500 1_555 BA O2A ATP . D ATP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc24 AA MG MG . D MG 500 1_555 BA O3A ATP . D ATP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc25 AA MG MG . D MG 500 1_555 BA O1B ATP . D ATP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc26 AA MG MG . D MG 500 1_555 BA O1A ATP . D ATP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? metalc ? metalc27 F OG1 THR 173 F THR 167 1_555 DA MG MG . F MG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc28 DA MG MG . F MG 500 1_555 EA O1B ATP . F ATP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc29 DA MG MG . F MG 500 1_555 EA O2G ATP . F ATP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc30 DA MG MG . F MG 500 1_555 EA O3B ATP . F ATP 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7Y5C _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 9 MG A 1 600 600 MG MG . V 10 ATP A 1 601 601 ATP ATP . W 9 MG B 1 600 600 MG MG . X 10 ATP B 1 601 601 ATP ATP . Y 9 MG C 1 600 600 MG MG . Z 10 ATP C 1 601 601 ATP ATP . AA 9 MG D 1 500 500 MG MG . BA 10 ATP D 1 501 501 ATP ATP . CA 11 ADP E 1 501 501 ADP ADP . DA 9 MG F 1 500 500 MG MG . EA 10 ATP F 1 501 501 ATP ATP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id W _atom_site.label_entity_id 9 _atom_site.Cartn_x 232.557 _atom_site.Cartn_y 253.17 _atom_site.Cartn_z 290.628 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 125.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 600 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 57 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #