data_7Y98 # _model_server_result.job_id 8FWOBKsL459AkAGTTiHfYA _model_server_result.datetime_utc '2024-10-20 19:01:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7y98 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 7Y98 # _exptl.entry_id 7Y98 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 288.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TESTOSTERONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.3 _cell.angle_gamma 90 _cell.entry_id 7Y98 _cell.length_a 72.722 _cell.length_b 95.703 _cell.length_c 78.987 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Y98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 352 A CYS 351 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc2 B SG CYS 352 B CYS 351 1_555 E FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? # _chem_comp.formula 'C19 H28 O2' _chem_comp.formula_weight 288.424 _chem_comp.id TES _chem_comp.mon_nstd_flag . _chem_comp.name TESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TES sing 372 n n C1 C10 TES sing 373 n n C1 H11 TES sing 374 n n C1 H12 TES sing 375 n n C2 C3 TES sing 376 n n C2 H21 TES sing 377 n n C2 H22 TES sing 378 n n C3 O3 TES doub 379 n n C3 C4 TES sing 380 n n C4 C5 TES doub 381 n n C4 H4 TES sing 382 n n C5 C6 TES sing 383 n n C5 C10 TES sing 384 n n C6 C7 TES sing 385 n n C6 H61 TES sing 386 n n C6 H62 TES sing 387 n n C7 C8 TES sing 388 n n C7 H71 TES sing 389 n n C7 H72 TES sing 390 n n C8 C9 TES sing 391 n n C8 C14 TES sing 392 n n C8 H8 TES sing 393 n n C9 C10 TES sing 394 n n C9 C11 TES sing 395 n n C9 H9 TES sing 396 n n C10 C19 TES sing 397 n n C11 C12 TES sing 398 n n C11 H111 TES sing 399 n n C11 H112 TES sing 400 n n C12 C13 TES sing 401 n n C12 H121 TES sing 402 n n C12 H122 TES sing 403 n n C13 C14 TES sing 404 n n C13 C17 TES sing 405 n n C13 C18 TES sing 406 n n C14 C15 TES sing 407 n n C14 H14 TES sing 408 n n C15 C16 TES sing 409 n n C15 H151 TES sing 410 n n C15 H152 TES sing 411 n n C16 C17 TES sing 412 n n C16 H161 TES sing 413 n n C16 H162 TES sing 414 n n C17 O17 TES sing 415 n n C17 H17 TES sing 416 n n O17 HO7 TES sing 417 n n C18 H181 TES sing 418 n n C18 H182 TES sing 419 n n C18 H183 TES sing 420 n n C19 H191 TES sing 421 n n C19 H192 TES sing 422 n n C19 H193 TES sing 423 n n # _atom_sites.entry_id 7Y98 _atom_sites.fract_transf_matrix[1][1] 0.013751 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003506 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010449 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013065 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 501 HEM HEM . D 3 TES A 1 502 710 TES TES . E 2 HEM B 1 501 501 HEM HEM . F 3 TES B 1 502 670 TES TES . G 4 HOH A 1 601 601 HOH HOH . G 4 HOH A 2 602 602 HOH HOH . G 4 HOH A 3 603 603 HOH HOH . G 4 HOH A 4 604 604 HOH HOH . G 4 HOH A 5 605 605 HOH HOH . G 4 HOH A 6 606 606 HOH HOH . G 4 HOH A 7 607 607 HOH HOH . G 4 HOH A 8 608 608 HOH HOH . G 4 HOH A 9 609 609 HOH HOH . G 4 HOH A 10 610 610 HOH HOH . G 4 HOH A 11 611 611 HOH HOH . G 4 HOH A 12 612 612 HOH HOH . G 4 HOH A 13 613 613 HOH HOH . G 4 HOH A 14 614 614 HOH HOH . G 4 HOH A 15 615 615 HOH HOH . G 4 HOH A 16 616 616 HOH HOH . G 4 HOH A 17 617 617 HOH HOH . G 4 HOH A 18 618 618 HOH HOH . G 4 HOH A 19 619 619 HOH HOH . G 4 HOH A 20 620 620 HOH HOH . G 4 HOH A 21 621 621 HOH HOH . G 4 HOH A 22 622 622 HOH HOH . G 4 HOH A 23 623 623 HOH HOH . G 4 HOH A 24 624 624 HOH HOH . G 4 HOH A 25 625 625 HOH HOH . G 4 HOH A 26 626 626 HOH HOH . G 4 HOH A 27 627 627 HOH HOH . G 4 HOH A 28 628 628 HOH HOH . G 4 HOH A 29 629 629 HOH HOH . G 4 HOH A 30 630 630 HOH HOH . G 4 HOH A 31 631 631 HOH HOH . G 4 HOH A 32 632 632 HOH HOH . G 4 HOH A 33 633 633 HOH HOH . G 4 HOH A 34 634 634 HOH HOH . G 4 HOH A 35 635 635 HOH HOH . G 4 HOH A 36 636 636 HOH HOH . G 4 HOH A 37 637 637 HOH HOH . G 4 HOH A 38 638 638 HOH HOH . G 4 HOH A 39 639 639 HOH HOH . G 4 HOH A 40 640 640 HOH HOH . G 4 HOH A 41 641 641 HOH HOH . G 4 HOH A 42 642 642 HOH HOH . G 4 HOH A 43 643 643 HOH HOH . G 4 HOH A 44 644 644 HOH HOH . G 4 HOH A 45 645 645 HOH HOH . G 4 HOH A 46 646 646 HOH HOH . G 4 HOH A 47 647 647 HOH HOH . G 4 HOH A 48 648 648 HOH HOH . G 4 HOH A 49 649 649 HOH HOH . G 4 HOH A 50 650 650 HOH HOH . G 4 HOH A 51 651 651 HOH HOH . G 4 HOH A 52 652 652 HOH HOH . G 4 HOH A 53 653 653 HOH HOH . G 4 HOH A 54 654 654 HOH HOH . G 4 HOH A 55 655 655 HOH HOH . G 4 HOH A 56 656 656 HOH HOH . G 4 HOH A 57 657 657 HOH HOH . G 4 HOH A 58 658 658 HOH HOH . G 4 HOH A 59 659 659 HOH HOH . G 4 HOH A 60 660 660 HOH HOH . G 4 HOH A 61 661 661 HOH HOH . G 4 HOH A 62 662 662 HOH HOH . G 4 HOH A 63 663 663 HOH HOH . G 4 HOH A 64 664 664 HOH HOH . G 4 HOH A 65 665 665 HOH HOH . G 4 HOH A 66 666 666 HOH HOH . G 4 HOH A 67 667 667 HOH HOH . G 4 HOH A 68 668 668 HOH HOH . G 4 HOH A 69 669 669 HOH HOH . G 4 HOH A 70 670 670 HOH HOH . G 4 HOH A 71 671 671 HOH HOH . G 4 HOH A 72 672 672 HOH HOH . G 4 HOH A 73 673 673 HOH HOH . G 4 HOH A 74 674 674 HOH HOH . G 4 HOH A 75 675 675 HOH HOH . G 4 HOH A 76 676 676 HOH HOH . G 4 HOH A 77 677 677 HOH HOH . G 4 HOH A 78 678 678 HOH HOH . G 4 HOH A 79 679 679 HOH HOH . G 4 HOH A 80 680 680 HOH HOH . G 4 HOH A 81 681 681 HOH HOH . G 4 HOH A 82 682 682 HOH HOH . G 4 HOH A 83 683 683 HOH HOH . G 4 HOH A 84 684 684 HOH HOH . G 4 HOH A 85 685 685 HOH HOH . G 4 HOH A 86 686 686 HOH HOH . G 4 HOH A 87 687 687 HOH HOH . G 4 HOH A 88 688 688 HOH HOH . G 4 HOH A 89 689 689 HOH HOH . G 4 HOH A 90 690 690 HOH HOH . G 4 HOH A 91 691 691 HOH HOH . G 4 HOH A 92 692 692 HOH HOH . G 4 HOH A 93 693 693 HOH HOH . G 4 HOH A 94 694 694 HOH HOH . G 4 HOH A 95 695 695 HOH HOH . G 4 HOH A 96 696 696 HOH HOH . G 4 HOH A 97 697 697 HOH HOH . G 4 HOH A 98 698 698 HOH HOH . G 4 HOH A 99 699 699 HOH HOH . G 4 HOH A 100 700 700 HOH HOH . G 4 HOH A 101 701 701 HOH HOH . G 4 HOH A 102 702 702 HOH HOH . G 4 HOH A 103 703 703 HOH HOH . G 4 HOH A 104 704 704 HOH HOH . G 4 HOH A 105 705 705 HOH HOH . G 4 HOH A 106 706 706 HOH HOH . H 4 HOH B 1 601 601 HOH HOH . H 4 HOH B 2 602 602 HOH HOH . H 4 HOH B 3 603 603 HOH HOH . H 4 HOH B 4 604 604 HOH HOH . H 4 HOH B 5 605 605 HOH HOH . H 4 HOH B 6 606 606 HOH HOH . H 4 HOH B 7 607 607 HOH HOH . H 4 HOH B 8 608 608 HOH HOH . H 4 HOH B 9 609 609 HOH HOH . H 4 HOH B 10 610 610 HOH HOH . H 4 HOH B 11 611 611 HOH HOH . H 4 HOH B 12 612 612 HOH HOH . H 4 HOH B 13 613 613 HOH HOH . H 4 HOH B 14 614 614 HOH HOH . H 4 HOH B 15 615 615 HOH HOH . H 4 HOH B 16 616 616 HOH HOH . H 4 HOH B 17 617 617 HOH HOH . H 4 HOH B 18 618 618 HOH HOH . H 4 HOH B 19 619 619 HOH HOH . H 4 HOH B 20 620 620 HOH HOH . H 4 HOH B 21 621 621 HOH HOH . H 4 HOH B 22 622 622 HOH HOH . H 4 HOH B 23 623 623 HOH HOH . H 4 HOH B 24 624 624 HOH HOH . H 4 HOH B 25 625 625 HOH HOH . H 4 HOH B 26 626 626 HOH HOH . H 4 HOH B 27 627 627 HOH HOH . H 4 HOH B 28 628 628 HOH HOH . H 4 HOH B 29 629 629 HOH HOH . H 4 HOH B 30 630 630 HOH HOH . H 4 HOH B 31 631 631 HOH HOH . H 4 HOH B 32 632 632 HOH HOH . H 4 HOH B 33 633 633 HOH HOH . H 4 HOH B 34 634 634 HOH HOH . H 4 HOH B 35 635 635 HOH HOH . H 4 HOH B 36 636 636 HOH HOH . H 4 HOH B 37 637 637 HOH HOH . H 4 HOH B 38 638 638 HOH HOH . H 4 HOH B 39 639 639 HOH HOH . H 4 HOH B 40 640 640 HOH HOH . H 4 HOH B 41 641 641 HOH HOH . H 4 HOH B 42 642 642 HOH HOH . H 4 HOH B 43 643 643 HOH HOH . H 4 HOH B 44 644 644 HOH HOH . H 4 HOH B 45 645 645 HOH HOH . H 4 HOH B 46 646 646 HOH HOH . H 4 HOH B 47 647 647 HOH HOH . H 4 HOH B 48 648 648 HOH HOH . H 4 HOH B 49 649 649 HOH HOH . H 4 HOH B 50 650 650 HOH HOH . H 4 HOH B 51 651 651 HOH HOH . H 4 HOH B 52 652 652 HOH HOH . H 4 HOH B 53 653 653 HOH HOH . H 4 HOH B 54 654 654 HOH HOH . H 4 HOH B 55 655 655 HOH HOH . H 4 HOH B 56 656 656 HOH HOH . H 4 HOH B 57 657 657 HOH HOH . H 4 HOH B 58 658 658 HOH HOH . H 4 HOH B 59 659 659 HOH HOH . H 4 HOH B 60 660 660 HOH HOH . H 4 HOH B 61 661 661 HOH HOH . H 4 HOH B 62 662 662 HOH HOH . H 4 HOH B 63 663 663 HOH HOH . H 4 HOH B 64 664 664 HOH HOH . H 4 HOH B 65 665 665 HOH HOH . H 4 HOH B 66 666 666 HOH HOH . H 4 HOH B 67 667 667 HOH HOH . H 4 HOH B 68 668 668 HOH HOH . H 4 HOH B 69 669 669 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TES . . . F 3 -42.818 -5.097 66.351 1 75.54 ? C1 TES 502 B 1 HETATM 2 C C2 TES . . . F 3 -41.765 -4.974 65.255 1 74.88 ? C2 TES 502 B 1 HETATM 3 C C3 TES . . . F 3 -40.511 -4.328 65.751 1 80.69 ? C3 TES 502 B 1 HETATM 4 O O3 TES . . . F 3 -39.686 -3.838 64.987 1 89.06 ? O3 TES 502 B 1 HETATM 5 C C4 TES . . . F 3 -40.319 -4.293 67.187 1 77.55 ? C4 TES 502 B 1 HETATM 6 C C5 TES . . . F 3 -41.009 -5.053 68.046 1 78.7 ? C5 TES 502 B 1 HETATM 7 C C6 TES . . . F 3 -40.517 -5.257 69.451 1 81.03 ? C6 TES 502 B 1 HETATM 8 C C7 TES . . . F 3 -41.622 -5.184 70.503 1 80.22 ? C7 TES 502 B 1 HETATM 9 C C8 TES . . . F 3 -42.777 -6.102 70.134 1 83.38 ? C8 TES 502 B 1 HETATM 10 C C9 TES . . . F 3 -43.353 -5.677 68.771 1 86.67 ? C9 TES 502 B 1 HETATM 11 C C10 TES . . . F 3 -42.284 -5.775 67.624 1 85.56 ? C10 TES 502 B 1 HETATM 12 C C11 TES . . . F 3 -44.736 -6.308 68.477 1 87.36 ? C11 TES 502 B 1 HETATM 13 C C12 TES . . . F 3 -45.274 -7.392 69.439 1 87.19 ? C12 TES 502 B 1 HETATM 14 C C13 TES . . . F 3 -44.845 -7.3 70.911 1 89.1 ? C13 TES 502 B 1 HETATM 15 C C14 TES . . . F 3 -43.937 -6.082 71.109 1 81.71 ? C14 TES 502 B 1 HETATM 16 C C15 TES . . . F 3 -43.742 -6.017 72.629 1 81.44 ? C15 TES 502 B 1 HETATM 17 C C16 TES . . . F 3 -45.129 -6.448 73.175 1 81.73 ? C16 TES 502 B 1 HETATM 18 C C17 TES . . . F 3 -45.928 -6.918 71.944 1 87.09 ? C17 TES 502 B 1 HETATM 19 O O17 TES . . . F 3 -46.85 -7.938 72.313 1 76.33 ? O17 TES 502 B 1 HETATM 20 C C18 TES . . . F 3 -44.168 -8.611 71.342 1 96.35 ? C18 TES 502 B 1 HETATM 21 C C19 TES . . . F 3 -41.889 -7.232 67.299 1 92.39 ? C19 TES 502 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 21 #