data_7YAA
#
_model_server_result.job_id            WEIcVG3FD8Aci0SuY4rwTw 
_model_server_result.datetime_utc      '2024-11-22 23:33:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7yaa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    7YAA 
#
_exptl.entry_id    7YAA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7YAA 
_cell.length_a            69.52 
_cell.length_b            99.874 
_cell.length_c            51.197 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7YAA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_454 -x-1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 -69.52 0 -25.5985 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B N PRO 1 B PRO 2 1_555 D C21 JJ9 . B JJ9 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale2 B SG CYS 10 B CYS 11 1_555 D C20 JJ9 . B JJ9 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.712 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7YAA 
_atom_sites.fract_transf_matrix[1][1]    0.014384 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010013 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019532 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 201 1 GOL GOL . 
D 4 JJ9 B 1 101 1 JJ9 LIG . 
E 5 HOH A 1 301 64 HOH HOH . 
E 5 HOH A 2 302 158 HOH HOH . 
E 5 HOH A 3 303 154 HOH HOH . 
E 5 HOH A 4 304 48 HOH HOH . 
E 5 HOH A 5 305 77 HOH HOH . 
E 5 HOH A 6 306 101 HOH HOH . 
E 5 HOH A 7 307 78 HOH HOH . 
E 5 HOH A 8 308 72 HOH HOH . 
E 5 HOH A 9 309 30 HOH HOH . 
E 5 HOH A 10 310 157 HOH HOH . 
E 5 HOH A 11 311 10 HOH HOH . 
E 5 HOH A 12 312 24 HOH HOH . 
E 5 HOH A 13 313 19 HOH HOH . 
E 5 HOH A 14 314 29 HOH HOH . 
E 5 HOH A 15 315 120 HOH HOH . 
E 5 HOH A 16 316 143 HOH HOH . 
E 5 HOH A 17 317 81 HOH HOH . 
E 5 HOH A 18 318 139 HOH HOH . 
E 5 HOH A 19 319 63 HOH HOH . 
E 5 HOH A 20 320 151 HOH HOH . 
E 5 HOH A 21 321 21 HOH HOH . 
E 5 HOH A 22 322 118 HOH HOH . 
E 5 HOH A 23 323 105 HOH HOH . 
E 5 HOH A 24 324 127 HOH HOH . 
E 5 HOH A 25 325 38 HOH HOH . 
E 5 HOH A 26 326 53 HOH HOH . 
E 5 HOH A 27 327 133 HOH HOH . 
E 5 HOH A 28 328 31 HOH HOH . 
E 5 HOH A 29 329 66 HOH HOH . 
E 5 HOH A 30 330 91 HOH HOH . 
E 5 HOH A 31 331 104 HOH HOH . 
E 5 HOH A 32 332 54 HOH HOH . 
E 5 HOH A 33 333 42 HOH HOH . 
E 5 HOH A 34 334 6 HOH HOH . 
E 5 HOH A 35 335 99 HOH HOH . 
E 5 HOH A 36 336 22 HOH HOH . 
E 5 HOH A 37 337 17 HOH HOH . 
E 5 HOH A 38 338 51 HOH HOH . 
E 5 HOH A 39 339 102 HOH HOH . 
E 5 HOH A 40 340 28 HOH HOH . 
E 5 HOH A 41 341 132 HOH HOH . 
E 5 HOH A 42 342 36 HOH HOH . 
E 5 HOH A 43 343 121 HOH HOH . 
E 5 HOH A 44 344 47 HOH HOH . 
E 5 HOH A 45 345 4 HOH HOH . 
E 5 HOH A 46 346 25 HOH HOH . 
E 5 HOH A 47 347 55 HOH HOH . 
E 5 HOH A 48 348 85 HOH HOH . 
E 5 HOH A 49 349 20 HOH HOH . 
E 5 HOH A 50 350 34 HOH HOH . 
E 5 HOH A 51 351 59 HOH HOH . 
E 5 HOH A 52 352 27 HOH HOH . 
E 5 HOH A 53 353 2 HOH HOH . 
E 5 HOH A 54 354 129 HOH HOH . 
E 5 HOH A 55 355 14 HOH HOH . 
E 5 HOH A 56 356 117 HOH HOH . 
E 5 HOH A 57 357 140 HOH HOH . 
E 5 HOH A 58 358 15 HOH HOH . 
E 5 HOH A 59 359 13 HOH HOH . 
E 5 HOH A 60 360 69 HOH HOH . 
E 5 HOH A 61 361 136 HOH HOH . 
E 5 HOH A 62 362 1 HOH HOH . 
E 5 HOH A 63 363 12 HOH HOH . 
E 5 HOH A 64 364 147 HOH HOH . 
E 5 HOH A 65 365 52 HOH HOH . 
E 5 HOH A 66 366 92 HOH HOH . 
E 5 HOH A 67 367 62 HOH HOH . 
E 5 HOH A 68 368 106 HOH HOH . 
E 5 HOH A 69 369 148 HOH HOH . 
E 5 HOH A 70 370 100 HOH HOH . 
E 5 HOH A 71 371 82 HOH HOH . 
E 5 HOH A 72 372 131 HOH HOH . 
E 5 HOH A 73 373 45 HOH HOH . 
E 5 HOH A 74 374 23 HOH HOH . 
E 5 HOH A 75 375 40 HOH HOH . 
E 5 HOH A 76 376 130 HOH HOH . 
E 5 HOH A 77 377 26 HOH HOH . 
E 5 HOH A 78 378 57 HOH HOH . 
E 5 HOH A 79 379 11 HOH HOH . 
E 5 HOH A 80 380 116 HOH HOH . 
E 5 HOH A 81 381 138 HOH HOH . 
E 5 HOH A 82 382 9 HOH HOH . 
E 5 HOH A 83 383 113 HOH HOH . 
E 5 HOH A 84 384 80 HOH HOH . 
E 5 HOH A 85 385 115 HOH HOH . 
E 5 HOH A 86 386 70 HOH HOH . 
E 5 HOH A 87 387 32 HOH HOH . 
E 5 HOH A 88 388 58 HOH HOH . 
E 5 HOH A 89 389 56 HOH HOH . 
E 5 HOH A 90 390 33 HOH HOH . 
E 5 HOH A 91 391 146 HOH HOH . 
E 5 HOH A 92 392 119 HOH HOH . 
E 5 HOH A 93 393 126 HOH HOH . 
E 5 HOH A 94 394 43 HOH HOH . 
E 5 HOH A 95 395 95 HOH HOH . 
E 5 HOH A 96 396 156 HOH HOH . 
E 5 HOH A 97 397 71 HOH HOH . 
E 5 HOH A 98 398 98 HOH HOH . 
E 5 HOH A 99 399 108 HOH HOH . 
E 5 HOH A 100 400 37 HOH HOH . 
E 5 HOH A 101 401 3 HOH HOH . 
E 5 HOH A 102 402 79 HOH HOH . 
E 5 HOH A 103 403 155 HOH HOH . 
E 5 HOH A 104 404 97 HOH HOH . 
E 5 HOH A 105 405 35 HOH HOH . 
E 5 HOH A 106 406 65 HOH HOH . 
E 5 HOH A 107 407 68 HOH HOH . 
E 5 HOH A 108 408 107 HOH HOH . 
E 5 HOH A 109 409 123 HOH HOH . 
E 5 HOH A 110 410 124 HOH HOH . 
E 5 HOH A 111 411 109 HOH HOH . 
E 5 HOH A 112 412 88 HOH HOH . 
E 5 HOH A 113 413 87 HOH HOH . 
E 5 HOH A 114 414 94 HOH HOH . 
E 5 HOH A 115 415 50 HOH HOH . 
E 5 HOH A 116 416 141 HOH HOH . 
E 5 HOH A 117 417 96 HOH HOH . 
E 5 HOH A 118 418 134 HOH HOH . 
E 5 HOH A 119 419 153 HOH HOH . 
E 5 HOH A 120 420 93 HOH HOH . 
E 5 HOH A 121 421 18 HOH HOH . 
E 5 HOH A 122 422 90 HOH HOH . 
E 5 HOH A 123 423 135 HOH HOH . 
E 5 HOH A 124 424 142 HOH HOH . 
E 5 HOH A 125 425 61 HOH HOH . 
E 5 HOH A 126 426 46 HOH HOH . 
E 5 HOH A 127 427 110 HOH HOH . 
E 5 HOH A 128 428 74 HOH HOH . 
E 5 HOH A 129 429 150 HOH HOH . 
E 5 HOH A 130 430 60 HOH HOH . 
E 5 HOH A 131 431 73 HOH HOH . 
E 5 HOH A 132 432 122 HOH HOH . 
E 5 HOH A 133 433 137 HOH HOH . 
E 5 HOH A 134 434 111 HOH HOH . 
E 5 HOH A 135 435 152 HOH HOH . 
E 5 HOH A 136 436 149 HOH HOH . 
E 5 HOH A 137 437 86 HOH HOH . 
E 5 HOH A 138 438 75 HOH HOH . 
E 5 HOH A 139 439 76 HOH HOH . 
E 5 HOH A 140 440 39 HOH HOH . 
E 5 HOH A 141 441 89 HOH HOH . 
E 5 HOH A 142 442 144 HOH HOH . 
E 5 HOH A 143 443 112 HOH HOH . 
F 5 HOH B 1 201 159 HOH HOH . 
F 5 HOH B 2 202 67 HOH HOH . 
F 5 HOH B 3 203 103 HOH HOH . 
F 5 HOH B 4 204 145 HOH HOH . 
F 5 HOH B 5 205 8 HOH HOH . 
F 5 HOH B 6 206 128 HOH HOH . 
F 5 HOH B 7 207 44 HOH HOH . 
F 5 HOH B 8 208 83 HOH HOH . 
F 5 HOH B 9 209 16 HOH HOH . 
F 5 HOH B 10 210 7 HOH HOH . 
F 5 HOH B 11 211 49 HOH HOH . 
F 5 HOH B 12 212 114 HOH HOH . 
F 5 HOH B 13 213 5 HOH HOH . 
F 5 HOH B 14 214 125 HOH HOH . 
F 5 HOH B 15 215 84 HOH HOH . 
F 5 HOH B 16 216 41 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 -24.25 -27.339 -7.253 1 20.49 ? C1 GOL 201 A 1 
HETATM 2 O O1 GOL . . . C 3 -25.436 -28.064 -7.569 1 26.74 ? O1 GOL 201 A 1 
HETATM 3 C C2 GOL . . . C 3 -23.485 -26.978 -8.522 1 21.42 ? C2 GOL 201 A 1 
HETATM 4 O O2 GOL . . . C 3 -23.122 -28.15 -9.272 1 24.19 ? O2 GOL 201 A 1 
HETATM 5 C C3 GOL . . . C 3 -24.287 -26.095 -9.434 1 21.48 ? C3 GOL 201 A 1 
HETATM 6 O O3 GOL . . . C 3 -23.471 -25.561 -10.464 1 22.82 ? O3 GOL 201 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           6 
#