data_7YAE # _model_server_result.job_id XcH3oSypmwuXWmCkMYLxSA _model_server_result.datetime_utc '2024-10-11 00:28:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7yae # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 7YAE # _exptl.entry_id 7YAE _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7YAE _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7YAE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 159 S CYS 159 1_555 D SG CYS 229 S CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 E SG CYS 123 E CYS 115 1_555 E SG CYS 201 E CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 F SG CYS 2 D CYS 2 1_555 F SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? covale ? covale1 F C DPN 1 D DPN 1 1_555 F N CYS 2 D CYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 F C PHE 3 D PHE 3 1_555 F N DTR 4 D DTR 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale3 F C DTR 4 D DTR 4 1_555 F N LYS 5 D LYS 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 F C CYS 7 D CYS 7 1_555 F N THO 8 D THO 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7YAE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 CLR E 1 401 1 CLR CLR . H 7 CLR E 1 402 2 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . G 7 117.946 112.288 125.717 1 74.6 ? C1 CLR 401 E 1 HETATM 2 C C2 CLR . . . G 7 118.212 112.551 124.244 1 74.6 ? C2 CLR 401 E 1 HETATM 3 C C3 CLR . . . G 7 119.677 112.304 123.915 1 74.6 ? C3 CLR 401 E 1 HETATM 4 C C4 CLR . . . G 7 120.019 110.841 124.161 1 74.6 ? C4 CLR 401 E 1 HETATM 5 C C5 CLR . . . G 7 119.616 110.462 125.565 1 74.6 ? C5 CLR 401 E 1 HETATM 6 C C6 CLR . . . G 7 120.481 109.796 126.346 1 74.6 ? C6 CLR 401 E 1 HETATM 7 C C7 CLR . . . G 7 120.044 108.917 127.498 1 74.6 ? C7 CLR 401 E 1 HETATM 8 C C8 CLR . . . G 7 118.612 109.226 127.911 1 74.6 ? C8 CLR 401 E 1 HETATM 9 C C9 CLR . . . G 7 118.227 110.663 127.577 1 74.6 ? C9 CLR 401 E 1 HETATM 10 C C10 CLR . . . G 7 118.25 110.842 126.073 1 74.6 ? C10 CLR 401 E 1 HETATM 11 C C11 CLR . . . G 7 116.864 111.088 128.133 1 74.6 ? C11 CLR 401 E 1 HETATM 12 C C12 CLR . . . G 7 116.608 110.655 129.576 1 74.6 ? C12 CLR 401 E 1 HETATM 13 C C13 CLR . . . G 7 116.926 109.18 129.694 1 74.6 ? C13 CLR 401 E 1 HETATM 14 C C14 CLR . . . G 7 118.391 109.001 129.393 1 74.6 ? C14 CLR 401 E 1 HETATM 15 C C15 CLR . . . G 7 118.754 107.635 129.954 1 74.6 ? C15 CLR 401 E 1 HETATM 16 C C16 CLR . . . G 7 117.786 107.426 131.119 1 74.6 ? C16 CLR 401 E 1 HETATM 17 C C17 CLR . . . G 7 116.749 108.544 131.054 1 74.6 ? C17 CLR 401 E 1 HETATM 18 C C18 CLR . . . G 7 116.089 108.397 128.687 1 74.6 ? C18 CLR 401 E 1 HETATM 19 C C19 CLR . . . G 7 117.219 109.924 125.426 1 74.6 ? C19 CLR 401 E 1 HETATM 20 C C20 CLR . . . G 7 115.327 108.056 131.285 1 74.6 ? C20 CLR 401 E 1 HETATM 21 C C21 CLR . . . G 7 114.461 109.161 131.877 1 74.6 ? C21 CLR 401 E 1 HETATM 22 C C22 CLR . . . G 7 115.312 106.821 132.175 1 74.6 ? C22 CLR 401 E 1 HETATM 23 C C23 CLR . . . G 7 115.3 107.211 133.648 1 74.6 ? C23 CLR 401 E 1 HETATM 24 C C24 CLR . . . G 7 115.833 106.074 134.51 1 74.6 ? C24 CLR 401 E 1 HETATM 25 C C25 CLR . . . G 7 117.351 105.977 134.413 1 74.6 ? C25 CLR 401 E 1 HETATM 26 C C26 CLR . . . G 7 117.989 106.055 135.794 1 74.6 ? C26 CLR 401 E 1 HETATM 27 C C27 CLR . . . G 7 117.776 104.705 133.689 1 74.6 ? C27 CLR 401 E 1 HETATM 28 O O1 CLR . . . G 7 119.895 112.622 122.539 1 74.6 ? O1 CLR 401 E 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #